EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0033571 (Gene tree)
Gene ID: 36160
Gene Symbol: Rpb5
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 1030 bases
Position: chr2R:10898031-10899060
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0087332	RNA_pol_Rpb5_N	PF03871.14	4.1e-33	1	1
FBpp0304268	RNA_pol_Rpb5_N	PF03871.14	4.1e-33	1	1
FBpp0087332	RNA_pol_Rpb5_C	PF01191.19	5.7e-33	1	1
FBpp0304268	RNA_pol_Rpb5_C	PF01191.19	5.7e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0331935	-	1030	-	FBpp0304268	210 (aa)	-	Q7JZF5
FBtr0088237	-	816	-	FBpp0087332	210 (aa)	-	Q7JZF5

Gene Model

Click here to download FBgn0033571's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0033571's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0033571	Rpb5	99	85.167	ENSG00000099817	POLR2E	99	85.606	Homo_sapiens
FBgn0033571	Rpb5	99	85.646	ENSAPOG00000002935	polr2eb	99	85.646	Acanthochromis_polyacanthus
FBgn0033571	Rpb5	99	85.646	ENSAMEG00000003159	POLR2E	99	85.646	Ailuropoda_melanoleuca
FBgn0033571	Rpb5	99	74.163	ENSACIG00000024371	polr2eb	99	74.163	Amphilophus_citrinellus
FBgn0033571	Rpb5	99	85.646	ENSAOCG00000018166	polr2eb	99	85.646	Amphiprion_ocellaris
FBgn0033571	Rpb5	99	85.646	ENSAPEG00000009000	polr2eb	99	85.646	Amphiprion_percula
FBgn0033571	Rpb5	99	85.646	ENSATEG00000023760	polr2eb	99	85.646	Anabas_testudineus
FBgn0033571	Rpb5	99	85.646	ENSANAG00000038488	POLR2E	99	85.646	Aotus_nancymaae
FBgn0033571	Rpb5	99	86.124	ENSACLG00000005254	polr2eb	99	86.124	Astatotilapia_calliptera
FBgn0033571	Rpb5	99	85.167	ENSAMXG00000018915	POLR2E	99	85.167	Astyanax_mexicanus
FBgn0033571	Rpb5	99	85.646	ENSBTAG00000020776	POLR2E	99	85.646	Bos_taurus
FBgn0033571	Rpb5	99	77.885	WBGene00019246	rpb-5	99	77.885	Caenorhabditis_elegans
FBgn0033571	Rpb5	66	82.014	ENSCJAG00000007666	-	76	82.014	Callithrix_jacchus
FBgn0033571	Rpb5	99	82.775	ENSCAFG00000019546	POLR2E	99	82.775	Canis_familiaris
FBgn0033571	Rpb5	99	85.646	ENSCAFG00020017111	POLR2E	99	85.646	Canis_lupus_dingo
FBgn0033571	Rpb5	99	85.646	ENSCHIG00000014151	POLR2E	99	85.646	Capra_hircus
FBgn0033571	Rpb5	99	71.770	ENSTSYG00000026377	POLR2E	99	71.770	Carlito_syrichta
FBgn0033571	Rpb5	91	85.864	ENSCAPG00000010843	POLR2E	93	85.864	Cavia_aperea
FBgn0033571	Rpb5	99	85.646	ENSCPOG00000001542	POLR2E	99	85.646	Cavia_porcellus
FBgn0033571	Rpb5	99	85.646	ENSCCAG00000025658	POLR2E	99	85.646	Cebus_capucinus
FBgn0033571	Rpb5	99	85.646	ENSCATG00000008926	POLR2E	99	85.646	Cercocebus_atys
FBgn0033571	Rpb5	99	85.646	ENSCLAG00000014874	-	99	85.646	Chinchilla_lanigera
FBgn0033571	Rpb5	98	65.366	ENSCLAG00000009238	-	100	65.366	Chinchilla_lanigera
FBgn0033571	Rpb5	99	85.646	ENSCSAG00000012336	POLR2E	99	85.646	Chlorocebus_sabaeus
FBgn0033571	Rpb5	99	85.646	ENSCPBG00000009702	POLR2E	99	85.646	Chrysemys_picta_bellii
FBgn0033571	Rpb5	99	84.211	ENSCING00000024933	-	99	84.211	Ciona_intestinalis
FBgn0033571	Rpb5	99	85.646	ENSCANG00000025560	POLR2E	99	85.646	Colobus_angolensis_palliatus
FBgn0033571	Rpb5	99	84.689	ENSCGRG00001022927	Polr2e	99	84.689	Cricetulus_griseus_chok1gshd
FBgn0033571	Rpb5	99	80.000	ENSCGRG00000016441	Polr2e	99	80.000	Cricetulus_griseus_crigri
FBgn0033571	Rpb5	99	85.646	ENSCSEG00000007107	polr2eb	91	85.646	Cynoglossus_semilaevis
FBgn0033571	Rpb5	99	85.646	ENSCVAG00000019940	polr2eb	99	85.646	Cyprinodon_variegatus
FBgn0033571	Rpb5	99	85.167	ENSDARG00000026183	polr2eb	99	85.167	Danio_rerio
FBgn0033571	Rpb5	93	83.163	ENSDNOG00000044994	POLR2E	86	83.163	Dasypus_novemcinctus
FBgn0033571	Rpb5	99	85.646	ENSDORG00000001154	Polr2e	99	85.646	Dipodomys_ordii
FBgn0033571	Rpb5	74	83.226	ENSEBUG00000010159	-	75	83.226	Eptatretus_burgeri
FBgn0033571	Rpb5	69	80.556	ENSEASG00005021615	POLR2E	61	80.556	Equus_asinus_asinus
FBgn0033571	Rpb5	91	84.293	ENSECAG00000011124	POLR2E	99	73.684	Equus_caballus
FBgn0033571	Rpb5	99	84.211	ENSELUG00000020646	polr2e	99	84.211	Esox_lucius
FBgn0033571	Rpb5	99	85.167	ENSELUG00000005815	POLR2E	99	85.167	Esox_lucius
FBgn0033571	Rpb5	99	85.167	ENSFCAG00000007318	POLR2E	99	85.167	Felis_catus
FBgn0033571	Rpb5	91	85.864	ENSFALG00000013986	POLR2E	98	85.864	Ficedula_albicollis
FBgn0033571	Rpb5	99	85.646	ENSFDAG00000014539	POLR2E	99	85.646	Fukomys_damarensis
FBgn0033571	Rpb5	99	85.646	ENSFHEG00000022398	polr2eb	99	85.646	Fundulus_heteroclitus
FBgn0033571	Rpb5	99	85.646	ENSGMOG00000007615	polr2eb	99	85.646	Gadus_morhua
FBgn0033571	Rpb5	99	85.646	ENSGALG00000002591	POLR2E	99	85.646	Gallus_gallus
FBgn0033571	Rpb5	99	86.124	ENSGAFG00000005087	polr2eb	99	86.124	Gambusia_affinis
FBgn0033571	Rpb5	99	85.167	ENSGACG00000013247	polr2eb	99	85.167	Gasterosteus_aculeatus
FBgn0033571	Rpb5	99	85.646	ENSGAGG00000008356	POLR2E	99	85.646	Gopherus_agassizii
FBgn0033571	Rpb5	99	85.646	ENSGGOG00000011267	POLR2E	99	85.646	Gorilla_gorilla
FBgn0033571	Rpb5	67	82.270	ENSHBUG00000011099	polr2eb	99	82.270	Haplochromis_burtoni
FBgn0033571	Rpb5	99	85.167	ENSHGLG00000013330	POLR2E	99	85.167	Heterocephalus_glaber_female
FBgn0033571	Rpb5	99	85.167	ENSHGLG00100011014	POLR2E	99	85.167	Heterocephalus_glaber_male
FBgn0033571	Rpb5	53	83.929	ENSHCOG00000012099	-	88	83.929	Hippocampus_comes
FBgn0033571	Rpb5	99	85.167	ENSHCOG00000000906	polr2eb	99	85.167	Hippocampus_comes
FBgn0033571	Rpb5	99	85.646	ENSIPUG00000019801	polr2e	99	85.646	Ictalurus_punctatus
FBgn0033571	Rpb5	99	85.646	ENSSTOG00000002853	POLR2E	99	85.646	Ictidomys_tridecemlineatus
FBgn0033571	Rpb5	99	84.689	ENSJJAG00000016595	-	99	84.689	Jaculus_jaculus
FBgn0033571	Rpb5	99	68.421	ENSJJAG00000003145	-	99	68.421	Jaculus_jaculus
FBgn0033571	Rpb5	76	70.000	ENSJJAG00000015812	-	99	70.000	Jaculus_jaculus
FBgn0033571	Rpb5	99	85.646	ENSKMAG00000005954	polr2eb	99	85.646	Kryptolebias_marmoratus
FBgn0033571	Rpb5	99	85.646	ENSLBEG00000024802	polr2eb	99	85.646	Labrus_bergylta
FBgn0033571	Rpb5	99	86.603	ENSLACG00000013686	POLR2E	99	86.603	Latimeria_chalumnae
FBgn0033571	Rpb5	77	85.185	ENSLOCG00000004599	POLR2E	100	85.185	Lepisosteus_oculatus
FBgn0033571	Rpb5	99	68.720	ENSLAFG00000025587	POLR2E	99	68.720	Loxodonta_africana
FBgn0033571	Rpb5	99	85.646	ENSMFAG00000002884	POLR2E	99	85.646	Macaca_fascicularis
FBgn0033571	Rpb5	99	85.646	ENSMMUG00000013927	POLR2E	99	85.646	Macaca_mulatta
FBgn0033571	Rpb5	99	85.646	ENSMNEG00000034046	-	99	85.646	Macaca_nemestrina
FBgn0033571	Rpb5	99	56.667	ENSMNEG00000033452	-	99	56.667	Macaca_nemestrina
FBgn0033571	Rpb5	91	70.833	ENSMLEG00000012405	POLR2E	94	70.833	Mandrillus_leucophaeus
FBgn0033571	Rpb5	99	85.646	ENSMAMG00000018703	polr2eb	99	85.646	Mastacembelus_armatus
FBgn0033571	Rpb5	90	85.789	ENSMZEG00005010796	polr2eb	96	85.789	Maylandia_zebra
FBgn0033571	Rpb5	99	84.762	ENSMGAG00000003769	POLR2E	99	84.762	Meleagris_gallopavo
FBgn0033571	Rpb5	99	58.852	ENSMAUG00000011003	-	99	58.852	Mesocricetus_auratus
FBgn0033571	Rpb5	91	84.375	ENSMAUG00000010125	-	99	84.737	Mesocricetus_auratus
FBgn0033571	Rpb5	99	85.646	ENSMICG00000013063	POLR2E	99	85.646	Microcebus_murinus
FBgn0033571	Rpb5	99	84.689	ENSMOCG00000013414	Polr2e	99	84.689	Microtus_ochrogaster
FBgn0033571	Rpb5	99	73.206	ENSMMOG00000001161	polr2eb	99	73.206	Mola_mola
FBgn0033571	Rpb5	90	78.421	ENSMMOG00000001167	polr2eb	88	78.421	Mola_mola
FBgn0033571	Rpb5	99	85.646	ENSMODG00000005494	POLR2E	99	85.646	Monodelphis_domestica
FBgn0033571	Rpb5	99	86.124	ENSMALG00000021888	polr2eb	99	86.124	Monopterus_albus
FBgn0033571	Rpb5	99	84.689	MGP_CAROLIEiJ_G0015561	Polr2e	99	84.689	Mus_caroli
FBgn0033571	Rpb5	99	84.689	ENSMUSG00000004667	Polr2e	99	84.689	Mus_musculus
FBgn0033571	Rpb5	99	84.689	MGP_PahariEiJ_G0030974	Polr2e	99	84.689	Mus_pahari
FBgn0033571	Rpb5	99	84.689	MGP_SPRETEiJ_G0016379	Polr2e	99	84.689	Mus_spretus
FBgn0033571	Rpb5	99	84.689	ENSMPUG00000008953	POLR2E	99	84.689	Mustela_putorius_furo
FBgn0033571	Rpb5	66	80.435	ENSMLUG00000006376	-	93	75.333	Myotis_lucifugus
FBgn0033571	Rpb5	99	85.646	ENSMLUG00000013193	POLR2E	99	85.646	Myotis_lucifugus
FBgn0033571	Rpb5	99	84.689	ENSNGAG00000001147	Polr2e	99	84.689	Nannospalax_galili
FBgn0033571	Rpb5	85	64.246	ENSNGAG00000017344	-	96	64.246	Nannospalax_galili
FBgn0033571	Rpb5	99	74.163	ENSNBRG00000022772	polr2eb	99	74.163	Neolamprologus_brichardi
FBgn0033571	Rpb5	99	82.381	ENSNLEG00000001207	-	99	82.381	Nomascus_leucogenys
FBgn0033571	Rpb5	99	62.201	ENSNLEG00000031364	-	99	62.201	Nomascus_leucogenys
FBgn0033571	Rpb5	99	75.120	ENSOPRG00000008331	POLR2E	99	75.120	Ochotona_princeps
FBgn0033571	Rpb5	89	76.882	ENSODEG00000007985	-	100	76.882	Octodon_degus
FBgn0033571	Rpb5	99	85.646	ENSODEG00000013230	-	99	85.646	Octodon_degus
FBgn0033571	Rpb5	99	62.201	ENSODEG00000011490	-	99	62.201	Octodon_degus
FBgn0033571	Rpb5	99	85.646	ENSONIG00000002519	polr2eb	99	85.646	Oreochromis_niloticus
FBgn0033571	Rpb5	99	86.124	ENSORLG00000015346	polr2eb	99	86.124	Oryzias_latipes
FBgn0033571	Rpb5	99	86.124	ENSORLG00020020700	polr2e	99	86.124	Oryzias_latipes_hni
FBgn0033571	Rpb5	99	86.124	ENSORLG00015016842	polr2e	99	86.124	Oryzias_latipes_hsok
FBgn0033571	Rpb5	99	85.646	ENSOMEG00000002709	polr2eb	99	85.646	Oryzias_melastigma
FBgn0033571	Rpb5	99	85.646	ENSOGAG00000012311	POLR2E	99	85.646	Otolemur_garnettii
FBgn0033571	Rpb5	99	85.646	ENSOARG00000010994	POLR2E	99	85.646	Ovis_aries
FBgn0033571	Rpb5	90	85.789	ENSPPAG00000003145	POLR2E	99	85.789	Pan_paniscus
FBgn0033571	Rpb5	99	85.167	ENSPPRG00000000777	POLR2E	99	85.167	Panthera_pardus
FBgn0033571	Rpb5	96	61.386	ENSPTIG00000012237	POLR2E	98	80.921	Panthera_tigris_altaica
FBgn0033571	Rpb5	99	85.646	ENSPTRG00000010183	POLR2E	99	85.646	Pan_troglodytes
FBgn0033571	Rpb5	99	85.646	ENSPANG00000018011	POLR2E	99	85.646	Papio_anubis
FBgn0033571	Rpb5	99	85.646	ENSPKIG00000024123	POLR2E	99	85.646	Paramormyrops_kingsleyae
FBgn0033571	Rpb5	99	85.167	ENSPKIG00000009607	POLR2E	99	85.167	Paramormyrops_kingsleyae
FBgn0033571	Rpb5	97	83.333	ENSPSIG00000002870	POLR2E	98	83.333	Pelodiscus_sinensis
FBgn0033571	Rpb5	99	73.684	ENSPMGG00000014354	polr2eb	99	73.684	Periophthalmus_magnuspinnatus
FBgn0033571	Rpb5	99	84.689	ENSPEMG00000023261	Polr2e	99	84.689	Peromyscus_maniculatus_bairdii
FBgn0033571	Rpb5	90	85.185	ENSPCIG00000007312	POLR2E	75	85.185	Phascolarctos_cinereus
FBgn0033571	Rpb5	99	86.124	ENSPFOG00000005734	polr2eb	99	86.124	Poecilia_formosa
FBgn0033571	Rpb5	99	86.124	ENSPLAG00000014496	polr2eb	99	86.124	Poecilia_latipinna
FBgn0033571	Rpb5	99	86.124	ENSPMEG00000008053	polr2eb	99	86.124	Poecilia_mexicana
FBgn0033571	Rpb5	99	86.124	ENSPREG00000006489	polr2eb	99	86.124	Poecilia_reticulata
FBgn0033571	Rpb5	99	80.000	ENSPPYG00000009305	POLR2E	99	80.000	Pongo_abelii
FBgn0033571	Rpb5	53	84.685	ENSPCAG00000016605	POLR2E	100	84.685	Procavia_capensis
FBgn0033571	Rpb5	99	85.646	ENSPCOG00000014491	POLR2E	99	85.646	Propithecus_coquereli
FBgn0033571	Rpb5	55	84.483	ENSPVAG00000007718	-	55	84.483	Pteropus_vampyrus
FBgn0033571	Rpb5	90	85.789	ENSPNYG00000019797	polr2eb	96	85.789	Pundamilia_nyererei
FBgn0033571	Rpb5	99	85.167	ENSPNAG00000026263	POLR2E	99	85.167	Pygocentrus_nattereri
FBgn0033571	Rpb5	99	84.689	ENSRNOG00000013545	Polr2e	99	84.689	Rattus_norvegicus
FBgn0033571	Rpb5	99	85.646	ENSRBIG00000028726	-	99	85.646	Rhinopithecus_bieti
FBgn0033571	Rpb5	99	62.381	ENSRBIG00000027259	-	99	62.381	Rhinopithecus_bieti
FBgn0033571	Rpb5	99	85.646	ENSRROG00000043763	POLR2E	99	85.646	Rhinopithecus_roxellana
FBgn0033571	Rpb5	99	44.495	YBR154C	RPB5	98	44.495	Saccharomyces_cerevisiae
FBgn0033571	Rpb5	99	85.646	ENSSBOG00000027241	POLR2E	99	85.646	Saimiri_boliviensis_boliviensis
FBgn0033571	Rpb5	99	85.646	ENSSHAG00000010690	POLR2E	99	85.646	Sarcophilus_harrisii
FBgn0033571	Rpb5	99	85.646	ENSSFOG00015006073	polr2e	99	85.646	Scleropages_formosus
FBgn0033571	Rpb5	99	85.646	ENSSMAG00000012782	polr2eb	99	85.646	Scophthalmus_maximus
FBgn0033571	Rpb5	99	85.646	ENSSDUG00000003352	polr2eb	99	85.646	Seriola_dumerili
FBgn0033571	Rpb5	99	85.646	ENSSLDG00000004965	polr2eb	99	85.646	Seriola_lalandi_dorsalis
FBgn0033571	Rpb5	99	84.689	ENSSPUG00000006114	POLR2E	99	84.689	Sphenodon_punctatus
FBgn0033571	Rpb5	99	85.646	ENSSPAG00000017556	polr2eb	99	85.646	Stegastes_partitus
FBgn0033571	Rpb5	99	85.646	ENSSSCG00000021472	POLR2E	99	85.646	Sus_scrofa
FBgn0033571	Rpb5	66	77.143	ENSTGUG00000000922	POLR2E	99	77.143	Taeniopygia_guttata
FBgn0033571	Rpb5	98	80.000	ENSTRUG00000018238	polr2eb	99	73.684	Takifugu_rubripes
FBgn0033571	Rpb5	99	85.646	ENSTNIG00000013187	polr2eb	99	85.646	Tetraodon_nigroviridis
FBgn0033571	Rpb5	99	85.167	ENSTTRG00000001484	POLR2E	99	85.167	Tursiops_truncatus
FBgn0033571	Rpb5	94	81.218	ENSUAMG00000009166	POLR2E	99	73.206	Ursus_americanus
FBgn0033571	Rpb5	99	85.646	ENSVVUG00000022818	POLR2E	54	85.646	Vulpes_vulpes
FBgn0033571	Rpb5	99	84.689	ENSXETG00000003291	polr2e	99	84.689	Xenopus_tropicalis
FBgn0033571	Rpb5	99	74.163	ENSXCOG00000009197	polr2eb	99	74.163	Xiphophorus_couchianus
FBgn0033571	Rpb5	99	86.124	ENSXMAG00000026495	polr2eb	99	86.124	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001054	RNA polymerase I activity	21873635.	IBA	Function
GO:0001055	RNA polymerase II activity	21873635.	IBA	Function
GO:0001056	RNA polymerase III activity	21873635.	IBA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	21873635.	IBA	Function
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	10908585.	ISS	Function
GO:0005665	RNA polymerase II, core complex	21873635.	IBA	Component
GO:0005665	RNA polymerase II, core complex	10908585.	ISS	Component
GO:0005666	RNA polymerase III complex	21873635.	IBA	Component
GO:0005736	RNA polymerase I complex	21873635.	IBA	Component
GO:0006366	transcription by RNA polymerase II	10908585.	ISS	Process