EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0033879 (Gene tree)
Gene ID: 36536
Gene Symbol: CG6543
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 1385
Position: chr2R: 13852947-13854331
Accession
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0087643	-	1051	-	FBpp0086769	295 (aa)	-	Q7JR58
FBtr0087644	-	1124	-	FBpp0086770	295 (aa)	-	Q7JR58

Gene Model

Click here to download FBgn0033879's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0033879's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0033879	CG6543	94	65.343	WBGene00001155	ech-6	94	65.343	Caenorhabditis_elegans
FBgn0033879	CG6543	93	57.091	ENSG00000127884	ECHS1	95	57.091	Homo_sapiens
FBgn0033879	CG6543	97	59.298	ENSMUSG00000025465	Echs1	97	59.298	Mus_musculus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004300	enoyl-CoA hydratase activity	21873635.	IBA	Function
GO:0004300	enoyl-CoA hydratase activity	-	ISS	Function
GO:0005739	mitochondrion	19317464.	HDA	Component
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005759	mitochondrial matrix	-	ISS	Component
GO:0006635	fatty acid beta-oxidation	21873635.	IBA	Process
GO:0006635	fatty acid beta-oxidation	-	ISS	Process