EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0034237 (Gene tree)
Gene ID: 36981
Gene Symbol: eIF3b
Alias: -
Full Name: eukaryotic translation initiation factor 3 subunit b
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 2930 bases
Position: chr2R:17536213-17539142
Accession: FBgn0034237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0086097	RRM_1	PF00076.22	6.1e-13	1	1
FBpp0086098	RRM_1	PF00076.22	6.1e-13	1	1
FBpp0086097	eIF2A	PF08662.11	2e-46	1	1
FBpp0086098	eIF2A	PF08662.11	2e-46	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0086942	-	2565	-	FBpp0086098	690 (aa)	-	Q0E940
FBtr0086941	-	2481	-	FBpp0086097	690 (aa)	-	Q0E940

Gene Model

Click here to download FBgn0034237's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0034237's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0034237	eIF3b	97	51.846	ENSG00000106263	EIF3B	95	43.919	Homo_sapiens
FBgn0034237	eIF3b	97	51.704	ENSAPOG00000002297	eif3bb	99	51.533	Acanthochromis_polyacanthus
FBgn0034237	eIF3b	94	51.520	ENSACIG00000015396	eif3bb	99	51.241	Amphilophus_citrinellus
FBgn0034237	eIF3b	97	51.852	ENSAOCG00000010921	eif3bb	99	51.679	Amphiprion_ocellaris
FBgn0034237	eIF3b	97	51.852	ENSAPEG00000000844	eif3bb	99	51.679	Amphiprion_percula
FBgn0034237	eIF3b	97	51.556	ENSATEG00000008626	eif3bb	99	51.387	Anabas_testudineus
FBgn0034237	eIF3b	94	52.049	ENSAPLG00000016062	EIF3B	99	52.049	Anas_platyrhynchos
FBgn0034237	eIF3b	96	50.820	ENSACAG00000008874	-	75	50.073	Anolis_carolinensis
FBgn0034237	eIF3b	99	50.355	ENSANAG00000020360	EIF3B	86	50.355	Aotus_nancymaae
FBgn0034237	eIF3b	93	51.459	ENSACLG00000000870	eif3bb	98	51.173	Astatotilapia_calliptera
FBgn0034237	eIF3b	97	51.256	ENSAMXG00000009773	eif3ba	97	51.256	Astyanax_mexicanus
FBgn0034237	eIF3b	97	51.403	ENSBTAG00000007474	EIF3B	87	50.501	Bos_taurus
FBgn0034237	eIF3b	96	33.381	WBGene00001225	eif-3.B	97	33.001	Caenorhabditis_elegans
FBgn0034237	eIF3b	99	50.355	ENSCJAG00000001442	EIF3B	85	50.355	Callithrix_jacchus
FBgn0034237	eIF3b	97	51.852	ENSCAFG00000016418	EIF3B	83	51.149	Canis_familiaris
FBgn0034237	eIF3b	97	50.074	ENSCAFG00020020771	EIF3B	86	49.425	Canis_lupus_dingo
FBgn0034237	eIF3b	97	51.551	ENSCHIG00000009941	EIF3B	84	51.551	Capra_hircus
FBgn0034237	eIF3b	97	49.634	ENSTSYG00000008256	EIF3B	99	49.634	Carlito_syrichta
FBgn0034237	eIF3b	94	49.008	ENSCAPG00000009347	-	97	49.008	Cavia_aperea
FBgn0034237	eIF3b	88	47.650	ENSCAPG00000006394	-	96	47.650	Cavia_aperea
FBgn0034237	eIF3b	97	51.846	ENSCPOG00000031410	-	84	51.846	Cavia_porcellus
FBgn0034237	eIF3b	97	51.846	ENSCPOG00000012541	-	84	51.846	Cavia_porcellus
FBgn0034237	eIF3b	99	50.355	ENSCCAG00000021556	EIF3B	95	50.422	Cebus_capucinus
FBgn0034237	eIF3b	99	50.355	ENSCATG00000040107	EIF3B	85	50.355	Cercocebus_atys
FBgn0034237	eIF3b	97	51.846	ENSCLAG00000006140	EIF3B	84	51.846	Chinchilla_lanigera
FBgn0034237	eIF3b	99	46.241	ENSCSAG00000017603	EIF3B	85	46.241	Chlorocebus_sabaeus
FBgn0034237	eIF3b	50	50.000	ENSCHOG00000006142	-	59	50.000	Choloepus_hoffmanni
FBgn0034237	eIF3b	97	51.556	ENSCPBG00000020654	EIF3B	85	51.466	Chrysemys_picta_bellii
FBgn0034237	eIF3b	96	46.142	ENSCING00000003620	-	95	46.277	Ciona_intestinalis
FBgn0034237	eIF3b	97	51.846	ENSCANG00000042097	EIF3B	96	51.846	Colobus_angolensis_palliatus
FBgn0034237	eIF3b	99	50.071	ENSCGRG00001019278	Eif3b	86	50.071	Cricetulus_griseus_chok1gshd
FBgn0034237	eIF3b	99	50.071	ENSCGRG00000004618	Eif3b	86	50.071	Cricetulus_griseus_crigri
FBgn0034237	eIF3b	97	50.519	ENSCSEG00000020931	eif3bb	99	50.365	Cynoglossus_semilaevis
FBgn0034237	eIF3b	94	50.917	ENSCVAG00000015650	eif3bb	98	51.023	Cyprinodon_variegatus
FBgn0034237	eIF3b	97	50.960	ENSDARG00000059654	eif3ba	97	50.960	Danio_rerio
FBgn0034237	eIF3b	93	50.769	ENSDARG00000074213	eif3bb	99	50.590	Danio_rerio
FBgn0034237	eIF3b	99	50.431	ENSDNOG00000049572	EIF3B	82	50.431	Dasypus_novemcinctus
FBgn0034237	eIF3b	99	48.645	ENSDORG00000001401	Eif3b	86	48.645	Dipodomys_ordii
FBgn0034237	eIF3b	94	49.541	ENSETEG00000001719	EIF3B	98	49.541	Echinops_telfairi
FBgn0034237	eIF3b	99	50.218	ENSEBUG00000004379	eif3bb	98	50.216	Eptatretus_burgeri
FBgn0034237	eIF3b	99	51.216	ENSEASG00005021167	EIF3B	86	51.216	Equus_asinus_asinus
FBgn0034237	eIF3b	99	51.216	ENSECAG00000013671	EIF3B	86	51.216	Equus_caballus
FBgn0034237	eIF3b	84	50.286	ENSEEUG00000014359	EIF3B	87	50.286	Erinaceus_europaeus
FBgn0034237	eIF3b	98	50.729	ENSELUG00000021762	eif3bb	98	50.729	Esox_lucius
FBgn0034237	eIF3b	97	51.622	ENSFCAG00000005392	EIF3B	82	51.622	Felis_catus
FBgn0034237	eIF3b	97	52.290	ENSFALG00000013907	EIF3B	94	51.520	Ficedula_albicollis
FBgn0034237	eIF3b	97	51.846	ENSFDAG00000007558	EIF3B	85	51.846	Fukomys_damarensis
FBgn0034237	eIF3b	93	51.306	ENSFHEG00000002563	eif3bb	97	51.475	Fundulus_heteroclitus
FBgn0034237	eIF3b	98	49.420	ENSGMOG00000006100	eif3bb	99	49.420	Gadus_morhua
FBgn0034237	eIF3b	98	51.971	ENSGALG00000040999	EIF3B	83	51.971	Gallus_gallus
FBgn0034237	eIF3b	53	53.117	ENSGAFG00000004114	eif3bb	87	53.117	Gambusia_affinis
FBgn0034237	eIF3b	98	50.434	ENSGACG00000016738	eif3bb	99	50.434	Gasterosteus_aculeatus
FBgn0034237	eIF3b	99	50.723	ENSGAGG00000003659	EIF3B	85	50.723	Gopherus_agassizii
FBgn0034237	eIF3b	70	51.220	ENSGGOG00000016291	EIF3B	85	46.864	Gorilla_gorilla
FBgn0034237	eIF3b	93	51.459	ENSHBUG00000019329	eif3bb	98	51.173	Haplochromis_burtoni
FBgn0034237	eIF3b	97	51.403	ENSHGLG00000015253	EIF3B	84	51.403	Heterocephalus_glaber_female
FBgn0034237	eIF3b	97	51.403	ENSHGLG00100015005	EIF3B	85	51.403	Heterocephalus_glaber_male
FBgn0034237	eIF3b	94	50.382	ENSHCOG00000020583	eif3bb	98	50.146	Hippocampus_comes
FBgn0034237	eIF3b	97	51.176	ENSIPUG00000018347	eif3b	98	51.176	Ictalurus_punctatus
FBgn0034237	eIF3b	99	50.496	ENSSTOG00000021545	EIF3B	92	51.994	Ictidomys_tridecemlineatus
FBgn0034237	eIF3b	97	52.142	ENSJJAG00000014658	Eif3b	84	52.142	Jaculus_jaculus
FBgn0034237	eIF3b	94	50.765	ENSKMAG00000007432	eif3bb	98	50.737	Kryptolebias_marmoratus
FBgn0034237	eIF3b	94	51.216	ENSLBEG00000005233	eif3bb	99	50.803	Labrus_bergylta
FBgn0034237	eIF3b	99	51.009	ENSLACG00000010357	EIF3B	99	51.009	Latimeria_chalumnae
FBgn0034237	eIF3b	96	52.459	ENSLOCG00000004215	eif3bb	97	52.522	Lepisosteus_oculatus
FBgn0034237	eIF3b	99	50.284	ENSLAFG00000001540	EIF3B	88	50.284	Loxodonta_africana
FBgn0034237	eIF3b	99	50.355	ENSMFAG00000046100	EIF3B	89	50.355	Macaca_fascicularis
FBgn0034237	eIF3b	99	49.789	ENSMMUG00000015529	EIF3B	85	49.789	Macaca_mulatta
FBgn0034237	eIF3b	99	50.355	ENSMNEG00000042021	EIF3B	85	50.355	Macaca_nemestrina
FBgn0034237	eIF3b	97	51.846	ENSMLEG00000042295	EIF3B	99	51.846	Mandrillus_leucophaeus
FBgn0034237	eIF3b	97	52.000	ENSMAMG00000008654	eif3bb	99	51.825	Mastacembelus_armatus
FBgn0034237	eIF3b	93	51.459	ENSMZEG00005011827	eif3bb	98	51.173	Maylandia_zebra
FBgn0034237	eIF3b	94	52.049	ENSMGAG00000002719	EIF3B	99	52.049	Meleagris_gallopavo
FBgn0034237	eIF3b	97	51.256	ENSMAUG00000020259	Eif3b	83	51.256	Mesocricetus_auratus
FBgn0034237	eIF3b	99	50.355	ENSMICG00000010103	EIF3B	85	50.355	Microcebus_murinus
FBgn0034237	eIF3b	99	50.499	ENSMOCG00000000390	Eif3b	86	50.499	Microtus_ochrogaster
FBgn0034237	eIF3b	97	51.556	ENSMMOG00000003655	eif3bb	99	51.387	Mola_mola
FBgn0034237	eIF3b	98	51.466	ENSMODG00000009778	EIF3B	80	51.466	Monodelphis_domestica
FBgn0034237	eIF3b	97	46.725	ENSMALG00000002494	eif3bb	99	46.915	Monopterus_albus
FBgn0034237	eIF3b	99	50.499	MGP_CAROLIEiJ_G0027948	Eif3b	98	50.588	Mus_caroli
FBgn0034237	eIF3b	99	50.499	ENSMUSG00000056076	Eif3b	97	50.588	Mus_musculus
FBgn0034237	eIF3b	99	50.571	MGP_PahariEiJ_G0024520	Eif3b	98	50.588	Mus_pahari
FBgn0034237	eIF3b	99	50.499	MGP_SPRETEiJ_G0028952	Eif3b	98	50.588	Mus_spretus
FBgn0034237	eIF3b	94	52.049	ENSMPUG00000017919	EIF3B	97	52.049	Mustela_putorius_furo
FBgn0034237	eIF3b	99	51.156	ENSMLUG00000013740	EIF3B	99	51.156	Myotis_lucifugus
FBgn0034237	eIF3b	99	50.213	ENSNGAG00000016188	Eif3b	83	51.846	Nannospalax_galili
FBgn0034237	eIF3b	74	50.467	ENSNBRG00000008582	eif3bb	97	51.111	Neolamprologus_brichardi
FBgn0034237	eIF3b	99	44.397	ENSNLEG00000008647	EIF3B	86	43.927	Nomascus_leucogenys
FBgn0034237	eIF3b	73	50.741	ENSMEUG00000000880	EIF3B	69	50.741	Notamacropus_eugenii
FBgn0034237	eIF3b	94	49.390	ENSOPRG00000014504	EIF3B	98	49.390	Ochotona_princeps
FBgn0034237	eIF3b	97	43.594	ENSODEG00000012851	EIF3B	83	43.446	Octodon_degus
FBgn0034237	eIF3b	93	51.613	ENSONIG00000003283	eif3bb	98	51.320	Oreochromis_niloticus
FBgn0034237	eIF3b	88	50.327	ENSOANG00000004314	EIF3B	99	50.327	Ornithorhynchus_anatinus
FBgn0034237	eIF3b	97	51.324	ENSOCUG00000010289	EIF3B	98	51.324	Oryctolagus_cuniculus
FBgn0034237	eIF3b	97	51.183	ENSORLG00000008861	eif3bb	99	50.946	Oryzias_latipes
FBgn0034237	eIF3b	97	51.183	ENSORLG00020012732	eif3bb	99	50.946	Oryzias_latipes_hni
FBgn0034237	eIF3b	97	51.111	ENSORLG00015000357	eif3bb	99	50.946	Oryzias_latipes_hsok
FBgn0034237	eIF3b	97	51.775	ENSOMEG00000017895	eif3bb	99	51.603	Oryzias_melastigma
FBgn0034237	eIF3b	99	47.324	ENSOGAG00000006319	EIF3B	94	47.257	Otolemur_garnettii
FBgn0034237	eIF3b	97	48.088	ENSOARG00000005137	EIF3B	98	47.151	Ovis_aries
FBgn0034237	eIF3b	97	51.846	ENSPPAG00000032833	EIF3B	94	51.846	Pan_paniscus
FBgn0034237	eIF3b	97	51.704	ENSPPRG00000003071	EIF3B	86	51.006	Panthera_pardus
FBgn0034237	eIF3b	94	51.593	ENSPTIG00000013328	EIF3B	83	51.593	Panthera_tigris_altaica
FBgn0034237	eIF3b	97	51.846	ENSPTRG00000046041	-	85	51.846	Pan_troglodytes
FBgn0034237	eIF3b	97	51.846	ENSPTRG00000018860	EIF3B	85	51.846	Pan_troglodytes
FBgn0034237	eIF3b	99	50.355	ENSPANG00000014557	EIF3B	89	50.355	Papio_anubis
FBgn0034237	eIF3b	96	52.530	ENSPKIG00000009981	eif3ba	97	52.671	Paramormyrops_kingsleyae
FBgn0034237	eIF3b	97	51.994	ENSPKIG00000011735	eif3bb	97	51.994	Paramormyrops_kingsleyae
FBgn0034237	eIF3b	97	51.852	ENSPSIG00000009889	EIF3B	94	50.570	Pelodiscus_sinensis
FBgn0034237	eIF3b	98	51.825	ENSPMGG00000016466	eif3bb	99	51.825	Periophthalmus_magnuspinnatus
FBgn0034237	eIF3b	99	50.499	ENSPEMG00000021554	Eif3b	86	50.499	Peromyscus_maniculatus_bairdii
FBgn0034237	eIF3b	92	49.065	ENSPMAG00000005331	eif3bb	97	49.065	Petromyzon_marinus
FBgn0034237	eIF3b	94	51.593	ENSPCIG00000009464	EIF3B	97	51.593	Phascolarctos_cinereus
FBgn0034237	eIF3b	93	51.152	ENSPFOG00000001449	eif3bb	99	51.095	Poecilia_formosa
FBgn0034237	eIF3b	93	47.773	ENSPLAG00000005120	eif3bb	98	47.953	Poecilia_latipinna
FBgn0034237	eIF3b	93	51.152	ENSPMEG00000015157	eif3bb	99	51.095	Poecilia_mexicana
FBgn0034237	eIF3b	93	51.231	ENSPREG00000006422	eif3bb	99	51.095	Poecilia_reticulata
FBgn0034237	eIF3b	99	50.427	ENSPPYG00000017313	EIF3B	76	51.929	Pongo_abelii
FBgn0034237	eIF3b	62	50.769	ENSPCAG00000010455	-	70	50.769	Procavia_capensis
FBgn0034237	eIF3b	97	51.846	ENSPCOG00000025894	EIF3B	81	51.846	Propithecus_coquereli
FBgn0034237	eIF3b	94	51.145	ENSPVAG00000013735	EIF3B	91	51.145	Pteropus_vampyrus
FBgn0034237	eIF3b	93	44.376	ENSPNYG00000014859	eif3bb	98	42.962	Pundamilia_nyererei
FBgn0034237	eIF3b	97	51.699	ENSPNAG00000021677	eif3ba	97	51.699	Pygocentrus_nattereri
FBgn0034237	eIF3b	99	50.427	ENSRNOG00000001253	Eif3b	86	50.427	Rattus_norvegicus
FBgn0034237	eIF3b	97	50.882	ENSRBIG00000030590	EIF3B	97	50.882	Rhinopithecus_bieti
FBgn0034237	eIF3b	99	50.355	ENSRROG00000035023	EIF3B	89	50.355	Rhinopithecus_roxellana
FBgn0034237	eIF3b	99	50.355	ENSSBOG00000001954	EIF3B	87	50.355	Saimiri_boliviensis_boliviensis
FBgn0034237	eIF3b	97	51.770	ENSSHAG00000001063	EIF3B	80	51.466	Sarcophilus_harrisii
FBgn0034237	eIF3b	96	51.857	ENSSFOG00015005824	eif3ba	96	52.000	Scleropages_formosus
FBgn0034237	eIF3b	97	51.765	ENSSFOG00015006390	eif3bb	98	51.765	Scleropages_formosus
FBgn0034237	eIF3b	98	51.026	ENSSMAG00000021264	eif3bb	98	51.026	Scophthalmus_maximus
FBgn0034237	eIF3b	97	51.556	ENSSDUG00000016761	eif3bb	99	51.387	Seriola_dumerili
FBgn0034237	eIF3b	94	51.376	ENSSLDG00000022874	eif3bb	99	51.241	Seriola_lalandi_dorsalis
FBgn0034237	eIF3b	94	51.298	ENSSARG00000006036	EIF3B	98	51.298	Sorex_araneus
FBgn0034237	eIF3b	96	50.523	ENSSPUG00000001870	EIF3B	99	50.760	Sphenodon_punctatus
FBgn0034237	eIF3b	94	51.376	ENSSPAG00000013403	eif3bb	99	51.387	Stegastes_partitus
FBgn0034237	eIF3b	97	51.699	ENSSSCG00000039390	EIF3B	87	50.644	Sus_scrofa
FBgn0034237	eIF3b	97	52.059	ENSTGUG00000008140	EIF3B	99	52.059	Taeniopygia_guttata
FBgn0034237	eIF3b	96	51.190	ENSTRUG00000011064	eif3bb	98	51.101	Takifugu_rubripes
FBgn0034237	eIF3b	97	50.812	ENSTNIG00000004648	eif3bb	99	50.812	Tetraodon_nigroviridis
FBgn0034237	eIF3b	97	45.562	ENSTBEG00000012836	EIF3B	75	45.562	Tupaia_belangeri
FBgn0034237	eIF3b	97	46.736	ENSTTRG00000014713	EIF3B	80	45.965	Tursiops_truncatus
FBgn0034237	eIF3b	99	50.436	ENSUAMG00000000800	EIF3B	99	51.420	Ursus_americanus
FBgn0034237	eIF3b	99	50.436	ENSUMAG00000007200	EIF3B	99	51.424	Ursus_maritimus
FBgn0034237	eIF3b	96	51.347	ENSVVUG00000004280	EIF3B	99	51.322	Vulpes_vulpes
FBgn0034237	eIF3b	97	52.148	ENSXETG00000020593	eif3b	99	51.308	Xenopus_tropicalis
FBgn0034237	eIF3b	94	50.765	ENSXCOG00000008279	eif3bb	98	50.661	Xiphophorus_couchianus
FBgn0034237	eIF3b	94	50.917	ENSXMAG00000004705	eif3bb	98	50.808	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003729	mRNA binding	10908586.	ISS	Function
GO:0003743	translation initiation factor activity	21873635.	IBA	Function
GO:0003743	translation initiation factor activity	10908586.	ISS	Function
GO:0005515	protein binding	17392269.	IPI	Function
GO:0005829	cytosol	10908586.	ISS	Component
GO:0005852	eukaryotic translation initiation factor 3 complex	21873635.	IBA	Component
GO:0005852	eukaryotic translation initiation factor 3 complex	10908586.	ISS	Component
GO:0006413	translational initiation	21873635.	IBA	Process
GO:0006413	translational initiation	10908586.	ISS	Process
GO:0006446	regulation of translational initiation	-	ISS	Process
GO:0030707	ovarian follicle cell development	26205122.	IMP	Process
GO:0031369	translation initiation factor binding	-	IEA	Function