EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0034258 (Gene tree)
Gene ID: 37005
Gene Symbol: eIF3c
Alias: -
Full Name: eukaryotic translation initiation factor 3 subunit c
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 3598 bases
Position: chr2R:17665678-17669275
Accession: FBgn0034258
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0086013	eIF-3c_N	PF05470.12	1.8e-255	1	1
FBpp0309235	eIF-3c_N	PF05470.12	1.8e-255	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0086836	-	3143	-	FBpp0086013	910 (aa)	-	A1ZAX1
FBtr0340269	-	3275	-	FBpp0309235	910 (aa)	-	A1ZAX1

Gene Model

Click here to download FBgn0034258's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0034258's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0034258	eIF3c	95	50.885	ENSG00000184110	EIF3C	97	57.500	Homo_sapiens
FBgn0034258	eIF3c	95	50.714	ENSG00000205609	EIF3CL	98	50.831	Homo_sapiens
FBgn0034258	eIF3c	97	50.483	ENSAPOG00000024092	eif3c	90	58.167	Acanthochromis_polyacanthus
FBgn0034258	eIF3c	95	51.160	ENSAMEG00000015454	-	98	51.109	Ailuropoda_melanoleuca
FBgn0034258	eIF3c	97	50.000	ENSACIG00000015082	eif3c	85	59.408	Amphilophus_citrinellus
FBgn0034258	eIF3c	83	57.851	ENSAOCG00000021466	eif3c	85	58.763	Amphiprion_ocellaris
FBgn0034258	eIF3c	83	57.851	ENSAPEG00000010521	eif3c	85	58.763	Amphiprion_percula
FBgn0034258	eIF3c	65	57.468	ENSATEG00000019001	eif3c	64	58.528	Anabas_testudineus
FBgn0034258	eIF3c	73	54.651	ENSACAG00000005937	-	98	52.772	Anolis_carolinensis
FBgn0034258	eIF3c	95	51.050	ENSANAG00000020640	-	98	50.887	Aotus_nancymaae
FBgn0034258	eIF3c	83	56.628	ENSACLG00000009322	eif3c	88	58.448	Astatotilapia_calliptera
FBgn0034258	eIF3c	83	57.426	ENSACLG00000009347	eif3c	87	58.390	Astatotilapia_calliptera
FBgn0034258	eIF3c	97	51.876	ENSAMXG00000020949	eif3c	67	57.508	Astyanax_mexicanus
FBgn0034258	eIF3c	63	57.627	ENSBTAG00000006543	EIF3CL	98	51.054	Bos_taurus
FBgn0034258	eIF3c	96	41.996	WBGene00001226	eif-3.C	64	45.254	Caenorhabditis_elegans
FBgn0034258	eIF3c	95	50.939	ENSCJAG00000006341	-	95	56.410	Callithrix_jacchus
FBgn0034258	eIF3c	95	51.271	ENSCAFG00000017143	-	98	51.109	Canis_familiaris
FBgn0034258	eIF3c	95	51.271	ENSCAFG00020017587	-	98	51.109	Canis_lupus_dingo
FBgn0034258	eIF3c	95	51.059	ENSCHIG00000024795	-	98	51.165	Capra_hircus
FBgn0034258	eIF3c	95	50.549	ENSTSYG00000003486	-	98	50.665	Carlito_syrichta
FBgn0034258	eIF3c	91	45.602	ENSCAPG00000015887	-	69	49.507	Cavia_aperea
FBgn0034258	eIF3c	95	50.332	ENSCPOG00000007533	-	66	57.355	Cavia_porcellus
FBgn0034258	eIF3c	95	51.505	ENSCCAG00000034928	-	98	50.668	Cebus_capucinus
FBgn0034258	eIF3c	95	49.447	ENSCCAG00000027724	-	98	48.670	Cebus_capucinus
FBgn0034258	eIF3c	95	45.028	ENSCCAG00000029099	-	67	50.247	Cebus_capucinus
FBgn0034258	eIF3c	95	50.885	ENSCATG00000032673	-	98	50.887	Cercocebus_atys
FBgn0034258	eIF3c	95	50.829	ENSCLAG00000011094	-	66	57.190	Chinchilla_lanigera
FBgn0034258	eIF3c	95	50.885	ENSCSAG00000006297	-	98	50.887	Chlorocebus_sabaeus
FBgn0034258	eIF3c	51	49.550	ENSCHOG00000003120	-	85	49.550	Choloepus_hoffmanni
FBgn0034258	eIF3c	70	51.786	ENSCPBG00000012407	-	85	53.474	Chrysemys_picta_bellii
FBgn0034258	eIF3c	95	50.885	ENSCANG00000033626	-	98	50.887	Colobus_angolensis_palliatus
FBgn0034258	eIF3c	63	57.119	ENSCGRG00001015265	EIF3C	66	57.025	Cricetulus_griseus_chok1gshd
FBgn0034258	eIF3c	97	51.965	ENSCSEG00000017770	eif3c	98	51.549	Cynoglossus_semilaevis
FBgn0034258	eIF3c	84	57.516	ENSCVAG00000005402	eif3c	90	58.221	Cyprinodon_variegatus
FBgn0034258	eIF3c	98	51.293	ENSDARG00000016443	eif3c	68	57.097	Danio_rerio
FBgn0034258	eIF3c	95	50.939	ENSDNOG00000031497	-	98	50.887	Dasypus_novemcinctus
FBgn0034258	eIF3c	95	49.780	ENSDORG00000016471	Eif3c	69	57.025	Dipodomys_ordii
FBgn0034258	eIF3c	55	62.439	ENSETEG00000013527	-	58	62.562	Echinops_telfairi
FBgn0034258	eIF3c	96	48.969	ENSEBUG00000001629	eif3c	70	53.459	Eptatretus_burgeri
FBgn0034258	eIF3c	95	51.106	ENSECAG00000008746	-	98	50.998	Equus_caballus
FBgn0034258	eIF3c	59	38.517	ENSEEUG00000000726	-	61	38.571	Erinaceus_europaeus
FBgn0034258	eIF3c	56	58.238	ENSEEUG00000006148	-	99	51.754	Erinaceus_europaeus
FBgn0034258	eIF3c	99	50.746	ENSELUG00000022257	eif3c	92	57.214	Esox_lucius
FBgn0034258	eIF3c	95	51.092	ENSFCAG00000015782	-	98	50.998	Felis_catus
FBgn0034258	eIF3c	95	50.725	ENSFDAG00000003588	-	68	57.355	Fukomys_damarensis
FBgn0034258	eIF3c	97	51.125	ENSFHEG00000014154	EIF3C	67	58.598	Fundulus_heteroclitus
FBgn0034258	eIF3c	63	59.044	ENSGMOG00000016885	eif3c	71	57.895	Gadus_morhua
FBgn0034258	eIF3c	93	52.602	ENSGACG00000007652	eif3c	66	59.333	Gasterosteus_aculeatus
FBgn0034258	eIF3c	65	56.169	ENSGAGG00000006666	-	98	50.907	Gopherus_agassizii
FBgn0034258	eIF3c	93	50.847	ENSGGOG00000026919	EIF3C	98	51.389	Gorilla_gorilla
FBgn0034258	eIF3c	95	50.332	ENSHGLG00000011445	EIF3C	66	57.190	Heterocephalus_glaber_female
FBgn0034258	eIF3c	95	50.332	ENSHGLG00100000217	EIF3C	66	57.190	Heterocephalus_glaber_male
FBgn0034258	eIF3c	97	51.173	ENSHCOG00000019694	eif3c	96	51.844	Hippocampus_comes
FBgn0034258	eIF3c	67	57.393	ENSIPUG00000016878	eif3c	96	52.106	Ictalurus_punctatus
FBgn0034258	eIF3c	95	51.271	ENSSTOG00000021278	-	98	51.109	Ictidomys_tridecemlineatus
FBgn0034258	eIF3c	63	57.458	ENSJJAG00000012722	Eif3c	98	51.109	Jaculus_jaculus
FBgn0034258	eIF3c	95	52.323	ENSKMAG00000021662	eif3c	64	57.711	Kryptolebias_marmoratus
FBgn0034258	eIF3c	95	51.609	ENSLBEG00000023370	eif3c	69	57.770	Labrus_bergylta
FBgn0034258	eIF3c	95	51.670	ENSLACG00000000770	eif3c	98	51.375	Latimeria_chalumnae
FBgn0034258	eIF3c	95	51.050	ENSLAFG00000027426	-	66	57.025	Loxodonta_africana
FBgn0034258	eIF3c	95	50.885	ENSMFAG00000041930	-	98	50.887	Macaca_fascicularis
FBgn0034258	eIF3c	95	50.885	ENSMMUG00000011798	-	98	50.887	Macaca_mulatta
FBgn0034258	eIF3c	95	50.885	ENSMNEG00000023915	-	98	50.887	Macaca_nemestrina
FBgn0034258	eIF3c	95	50.885	ENSMLEG00000027529	-	98	50.887	Mandrillus_leucophaeus
FBgn0034258	eIF3c	97	51.276	ENSMAMG00000012512	eif3c	94	57.003	Mastacembelus_armatus
FBgn0034258	eIF3c	83	57.426	ENSMZEG00005013699	eif3c	86	58.390	Maylandia_zebra
FBgn0034258	eIF3c	83	56.465	ENSMZEG00005013685	eif3c	88	58.276	Maylandia_zebra
FBgn0034258	eIF3c	63	57.119	ENSMAUG00000010621	Eif3c	66	57.025	Mesocricetus_auratus
FBgn0034258	eIF3c	95	51.160	ENSMICG00000036748	-	98	51.109	Microcebus_murinus
FBgn0034258	eIF3c	63	57.119	ENSMOCG00000004204	Eif3c	66	57.025	Microtus_ochrogaster
FBgn0034258	eIF3c	97	50.616	ENSMMOG00000001572	eif3c	89	58.957	Mola_mola
FBgn0034258	eIF3c	67	54.240	ENSMODG00000015579	-	98	49.499	Monodelphis_domestica
FBgn0034258	eIF3c	83	57.423	ENSMALG00000008907	eif3c	93	57.096	Monopterus_albus
FBgn0034258	eIF3c	95	50.443	MGP_CAROLIEiJ_G0030451	Eif3c	66	56.860	Mus_caroli
FBgn0034258	eIF3c	95	50.443	ENSMUSG00000030738	Eif3c	66	56.860	Mus_musculus
FBgn0034258	eIF3c	63	56.271	MGP_PahariEiJ_G0013661	Eif3c	66	56.198	Mus_pahari
FBgn0034258	eIF3c	95	50.443	MGP_SPRETEiJ_G0031565	Eif3c	66	56.860	Mus_spretus
FBgn0034258	eIF3c	91	51.379	ENSMPUG00000012732	-	98	51.505	Mustela_putorius_furo
FBgn0034258	eIF3c	95	50.883	ENSMLUG00000015558	-	66	57.426	Myotis_lucifugus
FBgn0034258	eIF3c	63	44.652	ENSNGAG00000010901	-	77	44.698	Nannospalax_galili
FBgn0034258	eIF3c	95	50.718	ENSNGAG00000007177	-	98	51.109	Nannospalax_galili
FBgn0034258	eIF3c	95	48.036	ENSNLEG00000001425	-	71	51.475	Nomascus_leucogenys
FBgn0034258	eIF3c	81	37.931	ENSMEUG00000005317	-	94	37.931	Notamacropus_eugenii
FBgn0034258	eIF3c	92	43.135	ENSMEUG00000009939	-	96	42.906	Notamacropus_eugenii
FBgn0034258	eIF3c	63	57.288	ENSOPRG00000000931	-	98	50.887	Ochotona_princeps
FBgn0034258	eIF3c	63	57.458	ENSODEG00000013508	-	66	57.355	Octodon_degus
FBgn0034258	eIF3c	65	40.800	ENSONIG00000011434	eif3c	95	41.098	Oreochromis_niloticus
FBgn0034258	eIF3c	59	57.741	ENSOANG00000011410	-	61	57.597	Ornithorhynchus_anatinus
FBgn0034258	eIF3c	95	50.221	ENSOCUG00000022489	-	98	50.998	Oryctolagus_cuniculus
FBgn0034258	eIF3c	95	52.614	ENSORLG00000006318	eif3c	93	52.461	Oryzias_latipes
FBgn0034258	eIF3c	95	52.614	ENSORLG00020015713	eif3c	94	52.461	Oryzias_latipes_hni
FBgn0034258	eIF3c	95	52.503	ENSORLG00015013772	eif3c	96	52.584	Oryzias_latipes_hsok
FBgn0034258	eIF3c	97	51.185	ENSOMEG00000020450	eif3c	66	57.374	Oryzias_melastigma
FBgn0034258	eIF3c	95	51.106	ENSOGAG00000012737	-	98	50.665	Otolemur_garnettii
FBgn0034258	eIF3c	63	57.458	ENSOARG00000002892	-	98	51.165	Ovis_aries
FBgn0034258	eIF3c	95	51.092	ENSPPRG00000012336	-	98	50.998	Panthera_pardus
FBgn0034258	eIF3c	95	51.092	ENSPTIG00000011712	-	98	50.998	Panthera_tigris_altaica
FBgn0034258	eIF3c	95	50.885	ENSPANG00000021151	-	98	50.887	Papio_anubis
FBgn0034258	eIF3c	99	50.320	ENSPKIG00000002049	eif3c	96	50.717	Paramormyrops_kingsleyae
FBgn0034258	eIF3c	83	57.377	ENSPMGG00000005409	eif3c	89	57.237	Periophthalmus_magnuspinnatus
FBgn0034258	eIF3c	95	51.168	ENSPEMG00000010899	Eif3c	67	57.025	Peromyscus_maniculatus_bairdii
FBgn0034258	eIF3c	68	53.810	ENSPCIG00000025206	-	98	49.498	Phascolarctos_cinereus
FBgn0034258	eIF3c	97	51.502	ENSPFOG00000004476	eif3c	96	52.116	Poecilia_formosa
FBgn0034258	eIF3c	97	50.715	ENSPLAG00000017480	eif3c	96	51.937	Poecilia_latipinna
FBgn0034258	eIF3c	97	51.717	ENSPMEG00000019512	eif3c	65	58.444	Poecilia_mexicana
FBgn0034258	eIF3c	95	49.004	ENSPPYG00000007227	-	98	49.002	Pongo_abelii
FBgn0034258	eIF3c	63	56.973	ENSPCAG00000012710	-	97	56.997	Procavia_capensis
FBgn0034258	eIF3c	95	51.160	ENSPCOG00000019289	-	98	50.998	Propithecus_coquereli
FBgn0034258	eIF3c	95	50.881	ENSPVAG00000005804	-	66	57.190	Pteropus_vampyrus
FBgn0034258	eIF3c	60	65.094	ENSPNYG00000016530	eif3c	76	65.094	Pundamilia_nyererei
FBgn0034258	eIF3c	98	51.991	ENSPNAG00000024040	eif3c	89	58.265	Pygocentrus_nattereri
FBgn0034258	eIF3c	63	56.949	ENSRNOG00000018761	Eif3c	66	56.860	Rattus_norvegicus
FBgn0034258	eIF3c	89	58.319	ENSRBIG00000044009	-	93	50.838	Rhinopithecus_bieti
FBgn0034258	eIF3c	91	57.458	ENSRROG00000043626	-	98	50.887	Rhinopithecus_roxellana
FBgn0034258	eIF3c	95	50.774	ENSSBOG00000032155	-	66	57.190	Saimiri_boliviensis_boliviensis
FBgn0034258	eIF3c	67	54.386	ENSSHAG00000011808	-	98	50.058	Sarcophilus_harrisii
FBgn0034258	eIF3c	99	50.535	ENSSFOG00015021823	eif3c	67	57.212	Scleropages_formosus
FBgn0034258	eIF3c	97	51.784	ENSSMAG00000016638	eif3c	67	58.075	Scophthalmus_maximus
FBgn0034258	eIF3c	97	51.542	ENSSDUG00000023117	eif3c	96	51.893	Seriola_dumerili
FBgn0034258	eIF3c	97	51.398	ENSSLDG00000009706	eif3c	93	57.586	Seriola_lalandi_dorsalis
FBgn0034258	eIF3c	99	50.959	ENSSPUG00000016470	-	98	52.667	Sphenodon_punctatus
FBgn0034258	eIF3c	66	58.075	ENSSPAG00000000426	eif3c	65	58.725	Stegastes_partitus
FBgn0034258	eIF3c	63	57.288	ENSSSCG00000034927	-	98	50.998	Sus_scrofa
FBgn0034258	eIF3c	97	50.539	ENSTRUG00000008951	eif3c	65	57.426	Takifugu_rubripes
FBgn0034258	eIF3c	65	57.166	ENSTNIG00000015210	eif3c	65	57.699	Tetraodon_nigroviridis
FBgn0034258	eIF3c	95	51.217	ENSTTRG00000005880	-	98	51.220	Tursiops_truncatus
FBgn0034258	eIF3c	63	57.288	ENSUAMG00000001127	-	91	69.427	Ursus_americanus
FBgn0034258	eIF3c	95	51.160	ENSUMAG00000010927	-	98	51.109	Ursus_maritimus
FBgn0034258	eIF3c	95	50.609	ENSVVUG00000025970	-	98	50.333	Vulpes_vulpes
FBgn0034258	eIF3c	97	50.162	ENSXETG00000002941	eif3c	97	51.670	Xenopus_tropicalis
FBgn0034258	eIF3c	97	51.732	ENSXMAG00000013796	eif3c	66	58.043	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003743	translation initiation factor activity	21873635.	IBA	Function
GO:0003743	translation initiation factor activity	10908586.	ISS	Function
GO:0005829	cytosol	10908586.	ISS	Component
GO:0005852	eukaryotic translation initiation factor 3 complex	21873635.	IBA	Component
GO:0005852	eukaryotic translation initiation factor 3 complex	10908586.	ISS	Component
GO:0006413	translational initiation	21873635.	IBA	Process
GO:0006413	translational initiation	10908586.	ISS	Process
GO:0031369	translation initiation factor binding	21873635.	IBA	Function