EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0034579 (Gene tree)
Gene ID: 37389
Gene Symbol: mRpL54
Alias: -
Full Name: mitochondrial ribosomal protein L54
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 799 bases
Position: chr2R:21060789-21061587
Accession: FBgn0034579
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0071462	Ribosomal_L37	PF08561.10	4.1e-10	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0071533	-	682	-	FBpp0071462	132 (aa)	-	Q8T9B2

Gene Model

Click here to download FBgn0034579's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0034579's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0034579	mRpL54	83	45.455	ENSG00000183617	MRPL54	57	48.718	Homo_sapiens
FBgn0034579	mRpL54	79	41.346	ENSAPOG00000022643	mrpl54	57	43.590	Acanthochromis_polyacanthus
FBgn0034579	mRpL54	59	46.154	ENSAMEG00000005908	MRPL54	57	46.154	Ailuropoda_melanoleuca
FBgn0034579	mRpL54	59	47.436	ENSACIG00000006438	mrpl54	57	47.436	Amphilophus_citrinellus
FBgn0034579	mRpL54	59	44.872	ENSAOCG00000006430	mrpl54	57	44.872	Amphiprion_ocellaris
FBgn0034579	mRpL54	59	44.872	ENSAPEG00000023406	mrpl54	57	44.872	Amphiprion_percula
FBgn0034579	mRpL54	59	44.872	ENSATEG00000004969	mrpl54	57	44.872	Anabas_testudineus
FBgn0034579	mRpL54	54	39.437	ENSACAG00000017747	-	66	39.437	Anolis_carolinensis
FBgn0034579	mRpL54	82	44.444	ENSANAG00000028692	MRPL54	57	48.718	Aotus_nancymaae
FBgn0034579	mRpL54	59	44.872	ENSACLG00000001877	mrpl54	57	44.872	Astatotilapia_calliptera
FBgn0034579	mRpL54	59	48.718	ENSAMXG00000018143	mrpl54	55	48.718	Astyanax_mexicanus
FBgn0034579	mRpL54	93	38.298	ENSBTAG00000008396	MRPL54	57	47.436	Bos_taurus
FBgn0034579	mRpL54	58	43.038	WBGene00009128	mrpl-54	59	43.038	Caenorhabditis_elegans
FBgn0034579	mRpL54	82	44.444	ENSCJAG00000014998	MRPL54	57	48.718	Callithrix_jacchus
FBgn0034579	mRpL54	93	37.410	ENSCAFG00000019192	MRPL54	57	44.872	Canis_familiaris
FBgn0034579	mRpL54	93	37.410	ENSCAFG00020018333	MRPL54	57	44.872	Canis_lupus_dingo
FBgn0034579	mRpL54	83	42.202	ENSCHIG00000026538	MRPL54	57	47.436	Capra_hircus
FBgn0034579	mRpL54	59	46.154	ENSCAPG00000012166	MRPL54	82	46.154	Cavia_aperea
FBgn0034579	mRpL54	82	40.909	ENSCPOG00000031082	MRPL54	57	46.154	Cavia_porcellus
FBgn0034579	mRpL54	82	43.636	ENSCCAG00000000138	MRPL54	57	47.436	Cebus_capucinus
FBgn0034579	mRpL54	83	44.037	ENSCATG00000014066	MRPL54	57	47.436	Cercocebus_atys
FBgn0034579	mRpL54	83	42.202	ENSCLAG00000007908	MRPL54	58	46.154	Chinchilla_lanigera
FBgn0034579	mRpL54	83	44.037	ENSCSAG00000010950	MRPL54	57	47.436	Chlorocebus_sabaeus
FBgn0034579	mRpL54	57	37.333	ENSCING00000019896	-	53	37.333	Ciona_intestinalis
FBgn0034579	mRpL54	83	44.545	ENSCANG00000027841	MRPL54	57	48.718	Colobus_angolensis_palliatus
FBgn0034579	mRpL54	59	47.436	ENSCGRG00001019482	Mrpl54	57	47.436	Cricetulus_griseus_chok1gshd
FBgn0034579	mRpL54	59	47.436	ENSCGRG00000010923	Mrpl54	57	47.436	Cricetulus_griseus_crigri
FBgn0034579	mRpL54	57	48.000	ENSCSEG00000019883	mrpl54	52	47.436	Cynoglossus_semilaevis
FBgn0034579	mRpL54	79	42.308	ENSCVAG00000002210	mrpl54	56	44.872	Cyprinodon_variegatus
FBgn0034579	mRpL54	82	44.144	ENSDARG00000071468	mrpl54	57	49.351	Danio_rerio
FBgn0034579	mRpL54	59	44.872	ENSDNOG00000007387	MRPL54	57	44.872	Dasypus_novemcinctus
FBgn0034579	mRpL54	59	48.718	ENSDORG00000005326	Mrpl54	59	48.718	Dipodomys_ordii
FBgn0034579	mRpL54	83	41.441	ENSETEG00000017500	MRPL54	58	46.154	Echinops_telfairi
FBgn0034579	mRpL54	68	40.000	ENSEBUG00000003179	mrpl54	72	39.759	Eptatretus_burgeri
FBgn0034579	mRpL54	59	44.872	ENSEASG00005022283	MRPL54	57	44.872	Equus_asinus_asinus
FBgn0034579	mRpL54	59	44.872	ENSECAG00000001515	MRPL54	57	44.872	Equus_caballus
FBgn0034579	mRpL54	59	41.026	ENSELUG00000022358	mrpl54	57	41.026	Esox_lucius
FBgn0034579	mRpL54	59	46.154	ENSFCAG00000007144	MRPL54	57	46.154	Felis_catus
FBgn0034579	mRpL54	77	42.157	ENSFALG00000011660	MRPL54	72	46.154	Ficedula_albicollis
FBgn0034579	mRpL54	82	40.741	ENSFDAG00000020803	MRPL54	57	43.590	Fukomys_damarensis
FBgn0034579	mRpL54	59	44.872	ENSGALG00000027611	MRPL54	64	44.872	Gallus_gallus
FBgn0034579	mRpL54	59	47.436	ENSGAFG00000016193	mrpl54	57	47.436	Gambusia_affinis
FBgn0034579	mRpL54	59	46.154	ENSGAGG00000020238	MRPL54	66	45.238	Gopherus_agassizii
FBgn0034579	mRpL54	83	45.455	ENSGGOG00000014722	MRPL54	57	48.718	Gorilla_gorilla
FBgn0034579	mRpL54	83	40.367	ENSHGLG00000006157	MRPL54	58	43.590	Heterocephalus_glaber_female
FBgn0034579	mRpL54	83	40.367	ENSHGLG00100000788	MRPL54	58	43.590	Heterocephalus_glaber_male
FBgn0034579	mRpL54	59	47.436	ENSHCOG00000000536	mrpl54	55	47.436	Hippocampus_comes
FBgn0034579	mRpL54	59	42.308	ENSIPUG00000024854	mrpl54	56	42.308	Ictalurus_punctatus
FBgn0034579	mRpL54	59	46.154	ENSSTOG00000022378	MRPL54	80	46.154	Ictidomys_tridecemlineatus
FBgn0034579	mRpL54	82	44.954	ENSJJAG00000020405	Mrpl54	57	47.436	Jaculus_jaculus
FBgn0034579	mRpL54	59	46.154	ENSKMAG00000022310	mrpl54	56	46.154	Kryptolebias_marmoratus
FBgn0034579	mRpL54	59	44.872	ENSLBEG00000005935	mrpl54	57	44.872	Labrus_bergylta
FBgn0034579	mRpL54	54	42.254	ENSLACG00000013912	MRPL54	53	42.254	Latimeria_chalumnae
FBgn0034579	mRpL54	59	39.744	ENSLOCG00000003860	mrpl54	57	39.744	Lepisosteus_oculatus
FBgn0034579	mRpL54	93	36.429	ENSLAFG00000029657	MRPL54	56	44.872	Loxodonta_africana
FBgn0034579	mRpL54	83	44.037	ENSMFAG00000003311	MRPL54	57	47.436	Macaca_fascicularis
FBgn0034579	mRpL54	83	44.037	ENSMMUG00000044080	MRPL54	57	47.436	Macaca_mulatta
FBgn0034579	mRpL54	83	44.037	ENSMNEG00000039499	MRPL54	57	47.436	Macaca_nemestrina
FBgn0034579	mRpL54	79	43.269	ENSMAMG00000003291	mrpl54	60	46.154	Mastacembelus_armatus
FBgn0034579	mRpL54	69	42.857	ENSMGAG00000000951	MRPL54	80	44.872	Meleagris_gallopavo
FBgn0034579	mRpL54	91	39.516	ENSMAUG00000009543	Mrpl54	58	47.436	Mesocricetus_auratus
FBgn0034579	mRpL54	82	41.818	ENSMOCG00000017895	Mrpl54	57	47.436	Microtus_ochrogaster
FBgn0034579	mRpL54	59	44.872	ENSMMOG00000020370	mrpl54	62	44.872	Mola_mola
FBgn0034579	mRpL54	92	40.984	ENSMODG00000000602	MRPL54	52	47.887	Monodelphis_domestica
FBgn0034579	mRpL54	58	44.737	ENSMALG00000020280	mrpl54	55	44.737	Monopterus_albus
FBgn0034579	mRpL54	59	46.154	MGP_CAROLIEiJ_G0015629	Mrpl54	58	46.154	Mus_caroli
FBgn0034579	mRpL54	59	46.154	ENSMUSG00000034932	Mrpl54	58	46.154	Mus_musculus
FBgn0034579	mRpL54	82	44.037	MGP_PahariEiJ_G0031042	Mrpl54	57	47.436	Mus_pahari
FBgn0034579	mRpL54	59	46.154	MGP_SPRETEiJ_G0016447	Mrpl54	58	46.154	Mus_spretus
FBgn0034579	mRpL54	59	47.436	ENSMLUG00000010801	MRPL54	74	47.436	Myotis_lucifugus
FBgn0034579	mRpL54	59	44.872	ENSNGAG00000021044	Mrpl54	56	44.872	Nannospalax_galili
FBgn0034579	mRpL54	59	46.154	ENSNBRG00000000568	mrpl54	57	46.154	Neolamprologus_brichardi
FBgn0034579	mRpL54	81	42.056	ENSMEUG00000013033	MRPL54	58	46.753	Notamacropus_eugenii
FBgn0034579	mRpL54	89	41.880	ENSOPRG00000010035	-	58	44.872	Ochotona_princeps
FBgn0034579	mRpL54	83	39.450	ENSODEG00000013969	MRPL54	57	43.590	Octodon_degus
FBgn0034579	mRpL54	59	44.872	ENSONIG00000002312	mrpl54	50	44.872	Oreochromis_niloticus
FBgn0034579	mRpL54	59	47.436	ENSORLG00000016960	mrpl54	63	47.436	Oryzias_latipes
FBgn0034579	mRpL54	59	47.436	ENSORLG00020014934	mrpl54	75	47.436	Oryzias_latipes_hni
FBgn0034579	mRpL54	59	47.436	ENSORLG00015010788	mrpl54	61	47.436	Oryzias_latipes_hsok
FBgn0034579	mRpL54	59	50.000	ENSOMEG00000009005	mrpl54	57	50.000	Oryzias_melastigma
FBgn0034579	mRpL54	58	48.052	ENSOGAG00000026254	-	56	48.052	Otolemur_garnettii
FBgn0034579	mRpL54	59	48.718	ENSOGAG00000033519	-	57	48.718	Otolemur_garnettii
FBgn0034579	mRpL54	83	44.545	ENSPPAG00000042418	MRPL54	57	47.436	Pan_paniscus
FBgn0034579	mRpL54	59	46.154	ENSPPRG00000012325	MRPL54	59	46.154	Panthera_pardus
FBgn0034579	mRpL54	59	46.154	ENSPTIG00000017727	MRPL54	55	46.154	Panthera_tigris_altaica
FBgn0034579	mRpL54	83	44.545	ENSPTRG00000010276	MRPL54	57	47.436	Pan_troglodytes
FBgn0034579	mRpL54	82	44.444	ENSPANG00000033944	MRPL54	57	47.436	Papio_anubis
FBgn0034579	mRpL54	54	43.662	ENSPSIG00000013587	MRPL54	75	43.662	Pelodiscus_sinensis
FBgn0034579	mRpL54	92	40.476	ENSPEMG00000022929	Mrpl54	57	47.436	Peromyscus_maniculatus_bairdii
FBgn0034579	mRpL54	82	40.741	ENSPCIG00000025383	MRPL54	51	46.377	Phascolarctos_cinereus
FBgn0034579	mRpL54	79	45.192	ENSPFOG00000007409	mrpl54	57	47.436	Poecilia_formosa
FBgn0034579	mRpL54	79	45.192	ENSPLAG00000001640	mrpl54	57	47.436	Poecilia_latipinna
FBgn0034579	mRpL54	79	45.192	ENSPLAG00000001633	mrpl54	57	47.436	Poecilia_latipinna
FBgn0034579	mRpL54	79	45.192	ENSPMEG00000021068	mrpl54	57	47.436	Poecilia_mexicana
FBgn0034579	mRpL54	79	45.192	ENSPMEG00000021078	mrpl54	57	47.436	Poecilia_mexicana
FBgn0034579	mRpL54	79	45.192	ENSPREG00000012425	mrpl54	57	48.718	Poecilia_reticulata
FBgn0034579	mRpL54	83	44.545	ENSPPYG00000009386	MRPL54	57	47.436	Pongo_abelii
FBgn0034579	mRpL54	83	41.818	ENSPCAG00000000690	MRPL54	57	46.154	Procavia_capensis
FBgn0034579	mRpL54	59	52.564	ENSPCOG00000027550	MRPL54	57	52.564	Propithecus_coquereli
FBgn0034579	mRpL54	59	47.436	ENSPNAG00000000077	mrpl54	56	47.436	Pygocentrus_nattereri
FBgn0034579	mRpL54	59	43.590	ENSRNOG00000020464	Mrpl54	58	43.590	Rattus_norvegicus
FBgn0034579	mRpL54	83	44.545	ENSRBIG00000027038	MRPL54	58	48.718	Rhinopithecus_bieti
FBgn0034579	mRpL54	83	44.545	ENSRROG00000018776	MRPL54	58	48.718	Rhinopithecus_roxellana
FBgn0034579	mRpL54	82	43.519	ENSSBOG00000028081	MRPL54	57	47.436	Saimiri_boliviensis_boliviensis
FBgn0034579	mRpL54	59	46.154	ENSSHAG00000002557	MRPL54	57	46.154	Sarcophilus_harrisii
FBgn0034579	mRpL54	59	41.026	ENSSFOG00015008073	mrpl54	56	41.026	Scleropages_formosus
FBgn0034579	mRpL54	59	44.872	ENSSMAG00000009226	mrpl54	57	44.872	Scophthalmus_maximus
FBgn0034579	mRpL54	69	45.652	ENSSDUG00000009545	mrpl54	57	47.436	Seriola_dumerili
FBgn0034579	mRpL54	69	46.739	ENSSLDG00000001781	mrpl54	57	48.718	Seriola_lalandi_dorsalis
FBgn0034579	mRpL54	69	40.659	ENSSPUG00000015361	MRPL54	59	42.308	Sphenodon_punctatus
FBgn0034579	mRpL54	76	43.000	ENSSPAG00000015601	mrpl54	61	45.238	Stegastes_partitus
FBgn0034579	mRpL54	76	43.000	ENSSPAG00000003775	-	61	45.238	Stegastes_partitus
FBgn0034579	mRpL54	83	42.202	ENSSSCG00000024242	MRPL54	57	47.436	Sus_scrofa
FBgn0034579	mRpL54	59	44.872	ENSTRUG00000004609	mrpl54	57	44.872	Takifugu_rubripes
FBgn0034579	mRpL54	59	42.308	ENSTNIG00000015468	mrpl54	57	42.308	Tetraodon_nigroviridis
FBgn0034579	mRpL54	83	41.284	ENSTTRG00000004410	MRPL54	58	47.436	Tursiops_truncatus
FBgn0034579	mRpL54	59	46.154	ENSUAMG00000021572	MRPL54	57	46.154	Ursus_americanus
FBgn0034579	mRpL54	59	46.154	ENSUMAG00000007416	MRPL54	57	46.154	Ursus_maritimus
FBgn0034579	mRpL54	93	37.410	ENSVVUG00000004420	MRPL54	57	44.872	Vulpes_vulpes
FBgn0034579	mRpL54	89	39.167	ENSXETG00000033250	MRPL54	53	49.296	Xenopus_tropicalis
FBgn0034579	mRpL54	59	48.718	ENSXMAG00000003500	mrpl54	57	48.718	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	-	ISS	Function
GO:0003735	structural constituent of ribosome	17927810.	TAS	Function
GO:0005762	mitochondrial large ribosomal subunit	21873635.	IBA	Component
GO:0005762	mitochondrial large ribosomal subunit	-	ISS	Component
GO:0005762	mitochondrial large ribosomal subunit	17927810.	TAS	Component
GO:0032543	mitochondrial translation	17927810.	TAS	Process