EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0034646 (Gene tree)
Gene ID: 37467
Gene Symbol: Rae1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 1238
Position: chr2R: 21658770-21660007
Accession
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0071683	-	1189	-	FBpp0071600	346 (aa)	-	Q7JVX4

Gene Model

Click here to download FBgn0034646's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0034646's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0034646	Rae1	96	36.391	ENSG00000154473	BUB3	98	36.391	Homo_sapiens
FBgn0034646	Rae1	99	68.768	ENSMUSG00000027509	Rae1	95	68.768	Mus_musculus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000278	mitotic cell cycle	23788425.	IMP	Process
GO:0000972	transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery	21873635.	IBA	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0005515	protein binding	21874015.28554770.	IPI	Function
GO:0005634	nucleus	23788425.	IDA	Component
GO:0005635	nuclear envelope	14729268.23788425.	IDA	Component
GO:0005643	nuclear pore	21873635.	IBA	Component
GO:0005643	nuclear pore	21874015.	IPI	Component
GO:0006406	mRNA export from nucleus	14729268.	IMP	Process
GO:0007141	male meiosis I	23788425.	IMP	Process
GO:0007283	spermatogenesis	23788425.	IMP	Process
GO:0010506	regulation of autophagy	21874015.	IMP	Process
GO:0010628	positive regulation of gene expression	21874015.	IMP	Process
GO:0016006	Nebenkern	23788425.	IDA	Component
GO:0036126	sperm flagellum	23788425.	IDA	Component
GO:0043130	ubiquitin binding	21873635.	IBA	Function
GO:0045886	negative regulation of synaptic growth at neuromuscular junction	21874015.	IMP	Process
GO:2000045	regulation of G1/S transition of mitotic cell cycle	14729268.	IMP	Process