EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
FBgn0034834 (Gene tree)
Gene ID
37681
Gene Symbol
LS2
Alias
-
Full Name
Large Subunit 2
Gene Type
protein_coding
Species
Drosophila_melanogaster
Status
putative
Strand
Minus strand
Length
1410 bases
Position
chr2R:23210130-23211539
Accession
FBgn0034834
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
FBpp0071961RRM_1PF00076.229.6e-3612
FBpp0071961RRM_1PF00076.229.6e-3622
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
FBtr0072052-1410-FBpp0071961449 (aa)-Q8T8Y4
Gene Model
Click here to download FBgn0034834's gene model file
Protein-Protein Interaction (PPI)

Clik here to download FBgn0034834's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
FBgn0034834LS28657.143FBgn0005411U2af509857.641
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
FBgn0034834LS28553.904ENSG00000063244U2AF29854.321Homo_sapiens
FBgn0034834LS27155.108ENSAPOG00000023155u2af2a9855.108Acanthochromis_polyacanthus
FBgn0034834LS28754.342ENSAPOG00000002208-8254.342Acanthochromis_polyacanthus
FBgn0034834LS27752.778ENSAMEG00000003864U2AF28252.778Ailuropoda_melanoleuca
FBgn0034834LS28752.913ENSACIG00000014173-8452.913Amphilophus_citrinellus
FBgn0034834LS28553.401ENSACIG00000005749u2af2a9551.142Amphilophus_citrinellus
FBgn0034834LS28754.094ENSAOCG00000003595-8254.094Amphiprion_ocellaris
FBgn0034834LS28553.401ENSAOCG00000015571u2af2a9051.142Amphiprion_ocellaris
FBgn0034834LS28553.401ENSAPEG00000009376u2af2a9450.820Amphiprion_percula
FBgn0034834LS28754.000ENSAPEG00000020062-8254.000Amphiprion_percula
FBgn0034834LS28553.401ENSATEG00000022332u2af2a8850.567Anabas_testudineus
FBgn0034834LS28754.094ENSATEG00000020577-8454.094Anabas_testudineus
FBgn0034834LS28553.500ENSACAG00000015489U2AF28153.086Anolis_carolinensis
FBgn0034834LS28545.663ENSANAG00000028042U2AF27745.340Aotus_nancymaae
FBgn0034834LS28553.401ENSACLG00000022181u2af2a9551.142Astatotilapia_calliptera
FBgn0034834LS28754.094ENSACLG00000020793-8254.094Astatotilapia_calliptera
FBgn0034834LS28552.513ENSAMXG00000039454u2af2b8649.767Astyanax_mexicanus
FBgn0034834LS28553.769ENSAMXG00000033347u2af2a8751.168Astyanax_mexicanus
FBgn0034834LS28553.904ENSBTAG00000002830U2AF28951.270Bos_taurus
FBgn0034834LS28547.545WBGene00006697uaf-19747.101Caenorhabditis_elegans
FBgn0034834LS28553.616ENSCJAG00000017128U2AF28951.030Callithrix_jacchus
FBgn0034834LS28553.904ENSCAFG00000002551U2AF28053.483Canis_familiaris
FBgn0034834LS28553.616ENSCAFG00020015445U2AF28053.202Canis_lupus_dingo
FBgn0034834LS28545.771ENSCHIG00000023595U2AF29343.556Capra_hircus
FBgn0034834LS28553.616ENSTSYG00000007432U2AF28452.956Carlito_syrichta
FBgn0034834LS28553.367ENSCAPG00000008466U2AF28452.956Cavia_aperea
FBgn0034834LS28553.367ENSCPOG00000001582U2AF28152.956Cavia_porcellus
FBgn0034834LS28553.616ENSCCAG00000023336U2AF28152.956Cebus_capucinus
FBgn0034834LS28553.904ENSCATG00000004637U2AF28053.483Cercocebus_atys
FBgn0034834LS28553.904ENSCLAG00000000596U2AF28053.483Chinchilla_lanigera
FBgn0034834LS28553.904ENSCSAG00000001722U2AF28053.483Chlorocebus_sabaeus
FBgn0034834LS28551.980ENSCPBG00000004485U2AF29854.321Chrysemys_picta_bellii
FBgn0034834LS28551.523ENSCING00000003455-8549.537Ciona_intestinalis
FBgn0034834LS28849.257ENSCSAVG00000006813-8946.682Ciona_savignyi
FBgn0034834LS28551.500ENSCANG00000043845-8151.111Colobus_angolensis_palliatus
FBgn0034834LS27753.889ENSCANG00000031002-7653.889Colobus_angolensis_palliatus
FBgn0034834LS28651.365ENSCGRG00001007486-8151.365Cricetulus_griseus_chok1gshd
FBgn0034834LS28553.904ENSCGRG00001003185-8951.270Cricetulus_griseus_chok1gshd
FBgn0034834LS25454.839ENSCGRG00000004524-7454.839Cricetulus_griseus_crigri
FBgn0034834LS28651.365ENSCGRG00000018587-8151.365Cricetulus_griseus_crigri
FBgn0034834LS28553.708ENSCSEG00000020504-9051.179Cynoglossus_semilaevis
FBgn0034834LS27052.137ENSCSEG00000018709u2af2a8445.578Cynoglossus_semilaevis
FBgn0034834LS28554.177ENSCVAG00000023307-8054.177Cyprinodon_variegatus
FBgn0034834LS28553.401ENSCVAG00000001259u2af2a9051.142Cyprinodon_variegatus
FBgn0034834LS28553.283ENSDARG00000012505u2af2a8650.704Danio_rerio
FBgn0034834LS28553.283ENSDARG00000011740u2af2b8751.739Danio_rerio
FBgn0034834LS27753.889ENSDNOG00000047039U2AF27653.889Dasypus_novemcinctus
FBgn0034834LS28553.616ENSDORG00000003250U2af28152.956Dipodomys_ordii
FBgn0034834LS28544.810ENSEBUG00000001732U2AF28544.363Eptatretus_burgeri
FBgn0034834LS28651.005ENSEBUG00000010917U2AF28750.000Eptatretus_burgeri
FBgn0034834LS28553.616ENSEASG00005020708U2AF27553.202Equus_asinus_asinus
FBgn0034834LS28553.904ENSECAG00000010110U2AF28951.270Equus_caballus
FBgn0034834LS28651.589ENSELUG00000015850u2af2a8349.770Esox_lucius
FBgn0034834LS28853.827ENSELUG00000018459-8951.835Esox_lucius
FBgn0034834LS29549.318ENSELUG00000022291u2af2b8750.117Esox_lucius
FBgn0034834LS28553.616ENSFCAG00000011504U2AF28152.956Felis_catus
FBgn0034834LS28553.367ENSFDAG00000011264U2AF28152.956Fukomys_damarensis
FBgn0034834LS28553.418ENSFHEG00000016025u2af2a9051.142Fundulus_heteroclitus
FBgn0034834LS28553.015ENSGMOG00000004535u2af2a8750.701Gadus_morhua
FBgn0034834LS28653.133ENSGALG00000052748U2AF25453.133Gallus_gallus
FBgn0034834LS28553.924ENSGAFG00000005628-8852.000Gambusia_affinis
FBgn0034834LS28553.401ENSGAFG00000013626u2af2a7951.142Gambusia_affinis
FBgn0034834LS28951.932ENSGACG00000014500-8351.932Gasterosteus_aculeatus
FBgn0034834LS28553.401ENSGACG00000010632U2AF29051.025Gasterosteus_aculeatus
FBgn0034834LS27154.321ENSGAGG00000011849U2AF29854.321Gopherus_agassizii
FBgn0034834LS28553.401ENSHBUG00000013935u2af2a9551.142Haplochromis_burtoni
FBgn0034834LS28754.094ENSHBUG00000017424-8254.094Haplochromis_burtoni
FBgn0034834LS28553.616ENSHGLG00000005889U2AF28152.956Heterocephalus_glaber_female
FBgn0034834LS28553.616ENSHGLG00100004757U2AF28453.202Heterocephalus_glaber_male
FBgn0034834LS28552.152ENSHCOG00000019367u2af2a9049.886Hippocampus_comes
FBgn0034834LS28552.513ENSIPUG00000009077u2af29149.888Ictalurus_punctatus
FBgn0034834LS28653.350ENSIPUG00000007717u2af2a8253.350Ictalurus_punctatus
FBgn0034834LS29649.446ENSIPUG00000009844-8850.591Ictalurus_punctatus
FBgn0034834LS28553.616ENSSTOG00000019595U2AF28152.956Ictidomys_tridecemlineatus
FBgn0034834LS28553.616ENSJJAG00000017705U2af28153.202Jaculus_jaculus
FBgn0034834LS28553.149ENSKMAG00000005960u2af2a9350.913Kryptolebias_marmoratus
FBgn0034834LS28553.149ENSLBEG00000016162u2af2a9050.913Labrus_bergylta
FBgn0034834LS28752.913ENSLBEG00000005001-8951.034Labrus_bergylta
FBgn0034834LS28253.525ENSLACG00000001648U2AF29853.525Latimeria_chalumnae
FBgn0034834LS28554.707ENSLOCG00000010843-8353.641Lepisosteus_oculatus
FBgn0034834LS25953.650ENSLOCG00000008050u2af2b8151.613Lepisosteus_oculatus
FBgn0034834LS28553.904ENSLAFG00000018056-8153.202Loxodonta_africana
FBgn0034834LS29945.549ENSLAFG00000028496-8050.250Loxodonta_africana
FBgn0034834LS28553.616ENSMFAG00000038383U2AF28152.956Macaca_fascicularis
FBgn0034834LS28553.616ENSMMUG00000004810U2AF28053.367Macaca_mulatta
FBgn0034834LS28553.904ENSMNEG00000042096U2AF28951.030Macaca_nemestrina
FBgn0034834LS28553.904ENSMLEG00000032219U2AF27453.483Mandrillus_leucophaeus
FBgn0034834LS28553.418ENSMAMG00000019817u2af2a9549.091Mastacembelus_armatus
FBgn0034834LS28752.868ENSMAMG00000020158-8152.868Mastacembelus_armatus
FBgn0034834LS28754.094ENSMZEG00005023318-8254.094Maylandia_zebra
FBgn0034834LS28553.401ENSMZEG00005016563u2af2a9051.142Maylandia_zebra
FBgn0034834LS28553.616ENSMAUG00000008180U2af28253.202Mesocricetus_auratus
FBgn0034834LS28553.904ENSMICG00000027681U2AF29350.559Microcebus_murinus
FBgn0034834LS28553.616ENSMOCG00000013214-8153.202Microtus_ochrogaster
FBgn0034834LS29846.072ENSMOCG00000007227-8149.751Microtus_ochrogaster
FBgn0034834LS27153.395ENSMOCG00000001018-9853.395Microtus_ochrogaster
FBgn0034834LS28553.401ENSMMOG00000016600u2af2a9551.142Mola_mola
FBgn0034834LS28552.078ENSMMOG00000000531-8751.054Mola_mola
FBgn0034834LS29550.113ENSMALG00000009985u2af2a9051.370Monopterus_albus
FBgn0034834LS28553.904MGP_CAROLIEiJ_G0029150U2af28153.202Mus_caroli
FBgn0034834LS28553.904ENSMUSG00000030435U2af29854.321Mus_musculus
FBgn0034834LS28553.904MGP_PahariEiJ_G0021017U2af28153.202Mus_pahari
FBgn0034834LS28553.904MGP_SPRETEiJ_G0030203U2af28153.202Mus_spretus
FBgn0034834LS28553.904ENSMPUG00000007135U2AF28053.483Mustela_putorius_furo
FBgn0034834LS28553.616ENSNGAG00000020369U2af28153.202Nannospalax_galili
FBgn0034834LS28752.913ENSNBRG00000011100-8452.913Neolamprologus_brichardi
FBgn0034834LS28553.401ENSNBRG00000002568u2af2a9551.142Neolamprologus_brichardi
FBgn0034834LS29345.287ENSNLEG00000010562U2AF29854.321Nomascus_leucogenys
FBgn0034834LS28647.512ENSMEUG00000002346U2AF28347.512Notamacropus_eugenii
FBgn0034834LS29642.760ENSODEG00000009254-8245.526Octodon_degus
FBgn0034834LS28549.377ENSODEG00000012729-8049.015Octodon_degus
FBgn0034834LS28754.094ENSONIG00000009682-8254.094Oreochromis_niloticus
FBgn0034834LS28553.401ENSONIG00000012793u2af2a8052.985Oreochromis_niloticus
FBgn0034834LS28553.149ENSORLG00000011545u2af2a9350.572Oryzias_latipes
FBgn0034834LS28553.149ENSORLG00020006941u2af2a9350.572Oryzias_latipes_hni
FBgn0034834LS28652.736ENSORLG00015012843u2af2a8550.572Oryzias_latipes_hsok
FBgn0034834LS28652.736ENSOMEG00000011386u2af2a9450.572Oryzias_melastigma
FBgn0034834LS29937.802ENSOGAG00000034729-6646.557Otolemur_garnettii
FBgn0034834LS28553.616ENSOGAG00000007206-8152.956Otolemur_garnettii
FBgn0034834LS28649.020ENSOARG00000001091U2AF28149.754Ovis_aries
FBgn0034834LS28553.616ENSPPAG00000039782U2AF28152.956Pan_paniscus
FBgn0034834LS28553.616ENSPPRG00000013843U2AF28152.956Panthera_pardus
FBgn0034834LS28649.877ENSPTIG00000005489U2AF28349.877Panthera_tigris_altaica
FBgn0034834LS28553.616ENSPTRG00000011523U2AF29854.321Pan_troglodytes
FBgn0034834LS28553.904ENSPANG00000008459U2AF28053.483Papio_anubis
FBgn0034834LS29749.667ENSPKIG00000014878-8550.831Paramormyrops_kingsleyae
FBgn0034834LS29649.776ENSPKIG00000024346u2af2b9250.935Paramormyrops_kingsleyae
FBgn0034834LS28640.241ENSPSIG00000008014U2AF29238.681Pelodiscus_sinensis
FBgn0034834LS28550.886ENSPMGG00000022980u2af2a9348.853Periophthalmus_magnuspinnatus
FBgn0034834LS28553.616ENSPEMG00000007378U2af29854.321Peromyscus_maniculatus_bairdii
FBgn0034834LS28652.970ENSPMAG00000004097u2af2a9350.111Petromyzon_marinus
FBgn0034834LS28553.367ENSPCIG00000018013U2AF28152.956Phascolarctos_cinereus
FBgn0034834LS28554.177ENSPFOG00000006433-8852.000Poecilia_formosa
FBgn0034834LS28553.401ENSPFOG00000010799u2af2a8152.985Poecilia_formosa
FBgn0034834LS28554.177ENSPLAG00000003275-8952.235Poecilia_latipinna
FBgn0034834LS28553.401ENSPLAG00000014365u2af2a9051.142Poecilia_latipinna
FBgn0034834LS28553.924ENSPMEG00000003734-8951.765Poecilia_mexicana
FBgn0034834LS28553.401ENSPMEG00000002969u2af2a9051.142Poecilia_mexicana
FBgn0034834LS28553.924ENSPREG00000013036-9756.028Poecilia_reticulata
FBgn0034834LS28553.401ENSPREG00000008739u2af2a9351.142Poecilia_reticulata
FBgn0034834LS26453.333ENSPPYG00000010429-7853.000Pongo_abelii
FBgn0034834LS28543.350ENSPCAG00000014399-8143.066Procavia_capensis
FBgn0034834LS28550.633ENSPCAG00000003709-9350.125Procavia_capensis
FBgn0034834LS28553.616ENSPCOG00000025870U2AF29350.783Propithecus_coquereli
FBgn0034834LS28553.616ENSPVAG00000004540U2AF28152.956Pteropus_vampyrus
FBgn0034834LS28553.401ENSPNYG00000001438u2af2a9551.142Pundamilia_nyererei
FBgn0034834LS28754.094ENSPNYG00000011605-8254.094Pundamilia_nyererei
FBgn0034834LS28553.518ENSPNAG00000027289u2af2b8851.168Pygocentrus_nattereri
FBgn0034834LS28554.177ENSPNAG00000007182-8552.257Pygocentrus_nattereri
FBgn0034834LS28553.266ENSPNAG00000017620u2af2a8650.701Pygocentrus_nattereri
FBgn0034834LS28553.904ENSRNOG00000015914U2af28053.483Rattus_norvegicus
FBgn0034834LS28553.865ENSRBIG00000041018U2AF28153.202Rhinopithecus_bieti
FBgn0034834LS27753.444ENSRROG00000031103-8253.444Rhinopithecus_roxellana
FBgn0034834LS28550.882ENSRROG00000031238-8050.498Rhinopithecus_roxellana
FBgn0034834LS28553.904ENSSBOG00000023891U2AF28053.483Saimiri_boliviensis_boliviensis
FBgn0034834LS25345.965ENSSHAG00000001167U2AF26245.263Sarcophilus_harrisii
FBgn0034834LS28553.266ENSSFOG00015019182u2af2b8453.266Scleropages_formosus
FBgn0034834LS29649.887ENSSFOG00015003884-9251.716Scleropages_formosus
FBgn0034834LS28753.598ENSSMAG00000013779-8253.598Scophthalmus_maximus
FBgn0034834LS28553.418ENSSMAG00000012582u2af2a9150.679Scophthalmus_maximus
FBgn0034834LS28553.401ENSSDUG00000009457u2af2a9051.142Seriola_dumerili
FBgn0034834LS28752.657ENSSDUG00000021434-8052.657Seriola_dumerili
FBgn0034834LS28553.401ENSSLDG00000022742u2af2a9051.142Seriola_lalandi_dorsalis
FBgn0034834LS28752.657ENSSLDG00000016151-8452.657Seriola_lalandi_dorsalis
FBgn0034834LS28552.593ENSSPUG00000010229U2AF28252.195Sphenodon_punctatus
FBgn0034834LS28553.401ENSSPAG00000022519u2af2a9051.142Stegastes_partitus
FBgn0034834LS28754.094ENSSPAG00000005241-8254.094Stegastes_partitus
FBgn0034834LS28553.904ENSSSCG00000034815U2AF28951.270Sus_scrofa
FBgn0034834LS28553.165ENSTRUG00000005514u2af2a9150.575Takifugu_rubripes
FBgn0034834LS28554.293ENSTNIG00000011257-8154.040Tetraodon_nigroviridis
FBgn0034834LS28553.401ENSTNIG00000008106U2AF28650.348Tetraodon_nigroviridis
FBgn0034834LS27751.111ENSTBEG00000009104U2AF29251.111Tupaia_belangeri
FBgn0034834LS28553.616ENSTTRG00000000987U2AF28152.956Tursiops_truncatus
FBgn0034834LS28553.616ENSUAMG00000019883U2AF28453.202Ursus_americanus
FBgn0034834LS28553.616ENSUMAG00000024586U2AF29854.321Ursus_maritimus
FBgn0034834LS28553.904ENSVVUG00000006956U2AF26051.270Vulpes_vulpes
FBgn0034834LS28552.463ENSXETG00000019128u2af28950.000Xenopus_tropicalis
FBgn0034834LS28553.401ENSXCOG00000019406u2af2a9351.142Xiphophorus_couchianus
FBgn0034834LS28553.924ENSXMAG00000000768-8551.370Xiphophorus_maculatus
FBgn0034834LS28553.401ENSXMAG00000011979u2af2a9051.142Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000243commitment complex21873635.IBAComponent
GO:0003723RNA binding21406555.IMPFunction
GO:0003729mRNA binding10908586.ISSFunction
GO:0005515protein binding21406555.IPIFunction
GO:0006397mRNA processing-IEAProcess
GO:0008187poly-pyrimidine tract binding21873635.IBAFunction
GO:0016607nuclear speck21873635.IBAComponent
GO:0030628pre-mRNA 3'-splice site binding21873635.IBAFunction
GO:0033119negative regulation of RNA splicing21406555.IMPProcess
GO:0060968regulation of gene silencing20838586.IMPProcess
GO:0071004U2-type prespliceosome21873635.IBAComponent
GO:0089701U2AF21873635.IBAComponent

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us