EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0034918 (Gene tree)
Gene ID: 37780
Gene Symbol: Pym
Alias: -
Full Name: Partner of Y14 and Mago
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Minus strand
Length: 983 bases
Position: chr2R:23855954-23856936
Accession: FBgn0034918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0072142	Mago-bind	PF09282.10	3.5e-13	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0072233	-	983	-	FBpp0072142	207 (aa)	-	P82804

Gene Model

Click here to download FBgn0034918's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0034918's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0034918	Pym	88	33.668	ENSG00000170473	PYM1	93	35.644	Homo_sapiens
FBgn0034918	Pym	98	34.222	ENSAPOG00000023045	pym1	99	34.222	Acanthochromis_polyacanthus
FBgn0034918	Pym	91	32.683	ENSAMEG00000003091	PYM1	97	35.096	Ailuropoda_melanoleuca
FBgn0034918	Pym	98	32.432	ENSAOCG00000021358	pym1	99	33.333	Amphiprion_ocellaris
FBgn0034918	Pym	98	32.432	ENSAPEG00000022679	pym1	99	33.333	Amphiprion_percula
FBgn0034918	Pym	92	31.674	ENSACAG00000005714	PYM1	99	32.301	Anolis_carolinensis
FBgn0034918	Pym	92	32.367	ENSANAG00000036967	PYM1	98	34.286	Aotus_nancymaae
FBgn0034918	Pym	98	36.585	ENSAMXG00000007650	pym1	99	38.537	Astyanax_mexicanus
FBgn0034918	Pym	88	33.846	ENSBTAG00000031146	PYM1	93	33.981	Bos_taurus
FBgn0034918	Pym	92	30.000	WBGene00011871	T20G5.9	78	30.000	Caenorhabditis_elegans
FBgn0034918	Pym	88	36.126	ENSCJAG00000041077	PYM1	95	36.000	Callithrix_jacchus
FBgn0034918	Pym	88	35.385	ENSCAFG00000000076	PYM1	93	34.951	Canis_familiaris
FBgn0034918	Pym	88	35.385	ENSCAFG00020026099	PYM1	93	34.951	Canis_lupus_dingo
FBgn0034918	Pym	88	35.602	ENSCHIG00000026207	PYM1	97	35.149	Capra_hircus
FBgn0034918	Pym	88	34.000	ENSTSYG00000000787	PYM1	93	36.139	Carlito_syrichta
FBgn0034918	Pym	88	33.668	ENSCCAG00000026187	PYM1	96	35.000	Cebus_capucinus
FBgn0034918	Pym	89	34.848	ENSCATG00000018801	PYM1	94	34.450	Cercocebus_atys
FBgn0034918	Pym	88	31.553	ENSCLAG00000007964	PYM1	93	32.075	Chinchilla_lanigera
FBgn0034918	Pym	88	35.385	ENSCSAG00000005291	PYM1	97	35.922	Chlorocebus_sabaeus
FBgn0034918	Pym	93	32.701	ENSCING00000006448	-	93	34.123	Ciona_intestinalis
FBgn0034918	Pym	93	30.909	ENSCSAVG00000009805	-	89	30.045	Ciona_savignyi
FBgn0034918	Pym	88	35.385	ENSCANG00000020338	-	94	35.294	Colobus_angolensis_palliatus
FBgn0034918	Pym	94	33.019	ENSCANG00000019757	-	84	33.333	Colobus_angolensis_palliatus
FBgn0034918	Pym	92	32.075	ENSCGRG00001018051	-	93	33.491	Cricetulus_griseus_chok1gshd
FBgn0034918	Pym	88	31.319	ENSCGRG00001004231	-	92	32.338	Cricetulus_griseus_chok1gshd
FBgn0034918	Pym	88	31.319	ENSCGRG00000018933	-	92	32.338	Cricetulus_griseus_crigri
FBgn0034918	Pym	89	31.884	ENSCGRG00000012495	-	94	33.491	Cricetulus_griseus_crigri
FBgn0034918	Pym	94	31.982	ENSCVAG00000017360	pym1	85	32.579	Cyprinodon_variegatus
FBgn0034918	Pym	98	33.182	ENSDARG00000046024	pym1	99	33.182	Danio_rerio
FBgn0034918	Pym	88	36.842	ENSDNOG00000048414	PYM1	86	36.318	Dasypus_novemcinctus
FBgn0034918	Pym	88	33.333	ENSDORG00000029448	Pym1	93	33.028	Dipodomys_ordii
FBgn0034918	Pym	88	33.854	ENSETEG00000004461	-	98	33.990	Echinops_telfairi
FBgn0034918	Pym	91	30.732	ENSEASG00005002271	PYM1	89	33.654	Equus_asinus_asinus
FBgn0034918	Pym	88	32.663	ENSECAG00000011870	PYM1	93	35.149	Equus_caballus
FBgn0034918	Pym	88	35.385	ENSFCAG00000013967	PYM1	93	34.951	Felis_catus
FBgn0034918	Pym	88	34.359	ENSFDAG00000006314	PYM1	93	33.981	Fukomys_damarensis
FBgn0034918	Pym	91	34.101	ENSFHEG00000005884	pym1	99	32.759	Fundulus_heteroclitus
FBgn0034918	Pym	89	32.093	ENSGMOG00000007239	pym1	96	33.962	Gadus_morhua
FBgn0034918	Pym	92	30.374	ENSGALG00000046169	PYM1	99	31.111	Gallus_gallus
FBgn0034918	Pym	98	32.328	ENSGAFG00000003280	pym1	99	32.727	Gambusia_affinis
FBgn0034918	Pym	88	31.683	ENSGAGG00000001973	PYM1	88	30.049	Gopherus_agassizii
FBgn0034918	Pym	88	33.668	ENSGGOG00000043246	PYM1	93	35.644	Gorilla_gorilla
FBgn0034918	Pym	88	32.843	ENSHGLG00000017155	PYM1	93	35.149	Heterocephalus_glaber_female
FBgn0034918	Pym	88	32.843	ENSHGLG00100015341	PYM1	98	34.826	Heterocephalus_glaber_male
FBgn0034918	Pym	98	33.180	ENSHCOG00000007987	pym1	85	31.250	Hippocampus_comes
FBgn0034918	Pym	98	33.641	ENSIPUG00000005975	wibga	99	34.234	Ictalurus_punctatus
FBgn0034918	Pym	90	31.863	ENSSTOG00000014206	PYM1	98	33.333	Ictidomys_tridecemlineatus
FBgn0034918	Pym	89	32.195	ENSJJAG00000013338	Pym1	96	30.180	Jaculus_jaculus
FBgn0034918	Pym	98	34.404	ENSLBEG00000015707	pym1	99	31.858	Labrus_bergylta
FBgn0034918	Pym	88	36.316	ENSLAFG00000002369	PYM1	93	35.961	Loxodonta_africana
FBgn0034918	Pym	88	35.385	ENSMFAG00000003048	PYM1	93	34.951	Macaca_fascicularis
FBgn0034918	Pym	88	35.385	ENSMMUG00000011002	PYM1	93	34.951	Macaca_mulatta
FBgn0034918	Pym	88	35.385	ENSMNEG00000034677	PYM1	93	34.951	Macaca_nemestrina
FBgn0034918	Pym	88	35.385	ENSMLEG00000007971	PYM1	93	34.951	Mandrillus_leucophaeus
FBgn0034918	Pym	99	32.110	ENSMAMG00000001588	pym1	99	32.599	Mastacembelus_armatus
FBgn0034918	Pym	88	33.500	ENSMAUG00000007318	Pym1	96	33.654	Mesocricetus_auratus
FBgn0034918	Pym	88	31.373	ENSMICG00000032962	PYM1	93	33.971	Microcebus_murinus
FBgn0034918	Pym	92	31.455	ENSMOCG00000010208	Pym1	98	31.050	Microtus_ochrogaster
FBgn0034918	Pym	98	34.300	ENSMMOG00000009301	pym1	98	30.455	Mola_mola
FBgn0034918	Pym	92	33.019	MGP_CAROLIEiJ_G0015953	Pym1	97	32.727	Mus_caroli
FBgn0034918	Pym	92	33.816	ENSMUSG00000064030	Pym1	97	33.182	Mus_musculus
FBgn0034918	Pym	92	33.971	MGP_PahariEiJ_G0031131	Pym1	93	31.111	Mus_pahari
FBgn0034918	Pym	92	33.816	MGP_SPRETEiJ_G0016778	Pym1	97	33.182	Mus_spretus
FBgn0034918	Pym	88	32.843	ENSMPUG00000000931	PYM1	93	35.644	Mustela_putorius_furo
FBgn0034918	Pym	92	34.272	ENSMLUG00000003586	PYM1	98	32.579	Myotis_lucifugus
FBgn0034918	Pym	88	32.843	ENSNGAG00000019207	Pym1	92	33.010	Nannospalax_galili
FBgn0034918	Pym	88	33.668	ENSNLEG00000017588	PYM1	93	35.644	Nomascus_leucogenys
FBgn0034918	Pym	88	32.683	ENSOPRG00000007797	PYM1	93	33.019	Ochotona_princeps
FBgn0034918	Pym	92	30.952	ENSODEG00000004289	PYM1	98	30.317	Octodon_degus
FBgn0034918	Pym	89	34.300	ENSOCUG00000025969	PYM1	86	35.349	Oryctolagus_cuniculus
FBgn0034918	Pym	98	30.631	ENSORLG00000030592	pym1	99	30.631	Oryzias_latipes
FBgn0034918	Pym	98	31.982	ENSORLG00020011264	pym1	99	33.023	Oryzias_latipes_hni
FBgn0034918	Pym	98	31.081	ENSORLG00015005287	pym1	99	33.333	Oryzias_latipes_hsok
FBgn0034918	Pym	98	34.615	ENSOMEG00000022250	pym1	99	34.615	Oryzias_melastigma
FBgn0034918	Pym	92	32.394	ENSOGAG00000007038	PYM1	97	36.967	Otolemur_garnettii
FBgn0034918	Pym	88	35.602	ENSOARG00000010856	PYM1	93	35.149	Ovis_aries
FBgn0034918	Pym	88	33.668	ENSPPAG00000043630	PYM1	93	35.644	Pan_paniscus
FBgn0034918	Pym	88	34.000	ENSPPRG00000013243	PYM1	93	34.466	Panthera_pardus
FBgn0034918	Pym	88	35.897	ENSPTIG00000017380	PYM1	93	35.437	Panthera_tigris_altaica
FBgn0034918	Pym	89	32.673	ENSPTRG00000005067	PYM1	95	34.634	Pan_troglodytes
FBgn0034918	Pym	89	34.848	ENSPANG00000009562	PYM1	94	34.450	Papio_anubis
FBgn0034918	Pym	98	31.651	ENSPKIG00000006301	pym1	99	31.111	Paramormyrops_kingsleyae
FBgn0034918	Pym	98	34.123	ENSPMGG00000023161	pym1	98	33.333	Periophthalmus_magnuspinnatus
FBgn0034918	Pym	89	31.401	ENSPEMG00000009372	Pym1	98	33.019	Peromyscus_maniculatus_bairdii
FBgn0034918	Pym	98	32.035	ENSPFOG00000008193	pym1	99	33.333	Poecilia_formosa
FBgn0034918	Pym	98	32.035	ENSPLAG00000009228	pym1	99	33.333	Poecilia_latipinna
FBgn0034918	Pym	98	32.035	ENSPMEG00000001505	pym1	99	33.333	Poecilia_mexicana
FBgn0034918	Pym	88	34.171	ENSPPYG00000004635	PYM1	97	36.139	Pongo_abelii
FBgn0034918	Pym	88	36.649	ENSPCOG00000019706	PYM1	96	33.014	Propithecus_coquereli
FBgn0034918	Pym	89	32.673	ENSPVAG00000011437	PYM1	98	35.122	Pteropus_vampyrus
FBgn0034918	Pym	98	33.173	ENSPNAG00000018833	pym1	99	32.273	Pygocentrus_nattereri
FBgn0034918	Pym	92	32.075	ENSRNOG00000058130	Pym1	97	32.727	Rattus_norvegicus
FBgn0034918	Pym	88	34.872	ENSRBIG00000033362	PYM1	93	34.466	Rhinopithecus_bieti
FBgn0034918	Pym	88	35.385	ENSRROG00000043620	PYM1	93	34.951	Rhinopithecus_roxellana
FBgn0034918	Pym	88	33.668	ENSSBOG00000029393	PYM1	93	35.644	Saimiri_boliviensis_boliviensis
FBgn0034918	Pym	91	33.495	ENSSFOG00015021475	pym1	98	31.878	Scleropages_formosus
FBgn0034918	Pym	98	35.160	ENSSMAG00000020912	pym1	99	33.188	Scophthalmus_maximus
FBgn0034918	Pym	88	33.333	ENSSARG00000009569	PYM1	98	34.434	Sorex_araneus
FBgn0034918	Pym	92	31.579	ENSSPUG00000015059	PYM1	99	30.909	Sphenodon_punctatus
FBgn0034918	Pym	98	32.143	ENSSPAG00000020100	pym1	99	32.735	Stegastes_partitus
FBgn0034918	Pym	90	32.212	ENSSSCG00000040825	PYM1	93	33.019	Sus_scrofa
FBgn0034918	Pym	98	34.199	ENSTRUG00000021367	pym1	99	33.333	Takifugu_rubripes
FBgn0034918	Pym	98	32.857	ENSTNIG00000012534	pym1	99	30.942	Tetraodon_nigroviridis
FBgn0034918	Pym	89	32.367	ENSTTRG00000014971	PYM1	98	33.493	Tursiops_truncatus
FBgn0034918	Pym	88	34.171	ENSUAMG00000014521	PYM1	93	35.644	Ursus_americanus
FBgn0034918	Pym	89	33.831	ENSUMAG00000016241	PYM1	86	35.294	Ursus_maritimus
FBgn0034918	Pym	88	35.385	ENSVVUG00000022749	PYM1	93	34.951	Vulpes_vulpes
FBgn0034918	Pym	92	31.220	ENSXETG00000021850	pym1	99	32.110	Xenopus_tropicalis
FBgn0034918	Pym	98	32.468	ENSXMAG00000011649	pym1	99	33.796	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	-	ISS	Process
GO:0002191	cap-dependent translational initiation	24967911.	IPI	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003723	RNA binding	14968132.	IDA	Function
GO:0005515	protein binding	12483225.14968132.	IPI	Function
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	14968132.	IDA	Component
GO:0008190	eukaryotic initiation factor 4E binding	24967911.	IPI	Function
GO:0031370	eukaryotic initiation factor 4G binding	24967911.	IPI	Function
GO:0035145	exon-exon junction complex	21873635.	IBA	Component
GO:0035145	exon-exon junction complex	14968132.	IDA	Component
GO:0043024	ribosomal small subunit binding	24967911.	IDA	Function
GO:0043024	ribosomal small subunit binding	24967911.	IPI	Function
GO:1903259	exon-exon junction complex disassembly	21873635.	IBA	Process
GO:1903259	exon-exon junction complex disassembly	24967911.	IMP	Process
GO:1990448	exon-exon junction complex binding	24967911.	IPI	Function