EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: FBgn0035235 (Gene tree)
Gene ID: 38184
Gene Symbol: CG7879
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Minus strand
Length: 8796 bases
Position: chr3L:1559813-1568608
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0072706	RRM_1	PF00076.22	3.8e-32	1	2
FBpp0072706	RRM_1	PF00076.22	3.8e-32	2	2
FBpp0072707	RRM_1	PF00076.22	3.8e-32	1	2
FBpp0072707	RRM_1	PF00076.22	3.8e-32	2	2

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0072826	-	3804	-	FBpp0072706	985 (aa)	-	Q9W0D6
FBtr0072827	-	3691	-	FBpp0072707	985 (aa)	-	Q8T3I6

Gene Model

Click here to download FBgn0035235's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0035235's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	15492211.	HMP	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003729	mRNA binding	10908586.	ISS	Function
GO:0005634	nucleus	15492211.	IC	Component