EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0035336 (Gene tree)
Gene ID: 38303
Gene Symbol: CG9004
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 2761 bases
Position: chr3L:2373728-2376488
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0072768	MA3	PF02847.17	2.8e-28	1	1
FBpp0072768	MIF4G	PF02854.19	8.4e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0072890	-	2708	-	FBpp0072768	854 (aa)	-	Q9W020

Gene Model

Click here to download FBgn0035336's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0035336's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0035336	CG9004	62	39.139	ENSG00000146909	NOM1	60	39.179	Homo_sapiens
FBgn0035336	CG9004	59	38.791	ENSAPOG00000012073	nom1	58	39.250	Acanthochromis_polyacanthus
FBgn0035336	CG9004	80	35.429	ENSAMEG00000001412	NOM1	71	39.245	Ailuropoda_melanoleuca
FBgn0035336	CG9004	59	39.208	ENSACIG00000018050	nom1	63	39.208	Amphilophus_citrinellus
FBgn0035336	CG9004	59	38.207	ENSAOCG00000006229	nom1	59	38.430	Amphiprion_ocellaris
FBgn0035336	CG9004	59	38.012	ENSAPEG00000015994	nom1	67	36.738	Amphiprion_percula
FBgn0035336	CG9004	77	37.331	ENSATEG00000005405	nom1	62	39.539	Anabas_testudineus
FBgn0035336	CG9004	61	41.021	ENSAPLG00000006585	NOM1	78	41.210	Anas_platyrhynchos
FBgn0035336	CG9004	68	39.430	ENSACAG00000011192	NOM1	61	39.700	Anolis_carolinensis
FBgn0035336	CG9004	60	38.104	ENSACLG00000000033	nom1	69	36.957	Astatotilapia_calliptera
FBgn0035336	CG9004	60	39.417	ENSAMXG00000041486	nom1	57	39.526	Astyanax_mexicanus
FBgn0035336	CG9004	77	36.999	ENSBTAG00000016435	NOM1	58	39.604	Bos_taurus
FBgn0035336	CG9004	80	35.786	ENSCJAG00000004336	NOM1	67	37.563	Callithrix_jacchus
FBgn0035336	CG9004	80	35.983	ENSCAFG00020005121	NOM1	60	39.245	Canis_lupus_dingo
FBgn0035336	CG9004	77	36.756	ENSCHIG00000020102	NOM1	59	39.010	Capra_hircus
FBgn0035336	CG9004	80	36.767	ENSTSYG00000000227	NOM1	62	39.626	Carlito_syrichta
FBgn0035336	CG9004	61	37.665	ENSCAPG00000016273	NOM1	98	37.665	Cavia_aperea
FBgn0035336	CG9004	80	34.233	ENSCPOG00000025538	NOM1	85	32.552	Cavia_porcellus
FBgn0035336	CG9004	79	34.136	ENSCLAG00000000267	NOM1	60	37.452	Chinchilla_lanigera
FBgn0035336	CG9004	62	40.789	ENSCPBG00000018215	NOM1	59	40.789	Chrysemys_picta_bellii
FBgn0035336	CG9004	63	33.577	ENSCING00000005248	-	72	33.577	Ciona_intestinalis
FBgn0035336	CG9004	62	39.212	ENSCANG00000041984	NOM1	89	39.212	Colobus_angolensis_palliatus
FBgn0035336	CG9004	77	35.540	ENSCGRG00001020293	Nom1	61	39.212	Cricetulus_griseus_chok1gshd
FBgn0035336	CG9004	60	39.689	ENSCGRG00000005405	Nom1	94	39.689	Cricetulus_griseus_crigri
FBgn0035336	CG9004	76	36.239	ENSCSEG00000000932	nom1	85	35.705	Cynoglossus_semilaevis
FBgn0035336	CG9004	77	36.377	ENSCVAG00000007562	nom1	80	36.182	Cyprinodon_variegatus
FBgn0035336	CG9004	84	34.297	ENSDARG00000060027	nom1	92	38.344	Danio_rerio
FBgn0035336	CG9004	59	33.002	ENSDORG00000015682	Nom1	72	32.937	Dipodomys_ordii
FBgn0035336	CG9004	79	35.724	ENSEASG00005001489	NOM1	61	40.000	Equus_asinus_asinus
FBgn0035336	CG9004	61	39.734	ENSECAG00000007596	NOM1	56	39.626	Equus_caballus
FBgn0035336	CG9004	59	38.976	ENSELUG00000006266	nom1	58	38.976	Esox_lucius
FBgn0035336	CG9004	79	35.662	ENSFCAG00000006467	NOM1	62	38.783	Felis_catus
FBgn0035336	CG9004	62	41.463	ENSFALG00000006904	NOM1	75	41.651	Ficedula_albicollis
FBgn0035336	CG9004	59	38.835	ENSFDAG00000016241	NOM1	61	38.791	Fukomys_damarensis
FBgn0035336	CG9004	60	38.372	ENSFHEG00000015974	nom1	78	37.237	Fundulus_heteroclitus
FBgn0035336	CG9004	58	37.800	ENSGMOG00000005129	nom1	71	36.842	Gadus_morhua
FBgn0035336	CG9004	72	37.380	ENSGALG00000006437	NOM1	60	39.777	Gallus_gallus
FBgn0035336	CG9004	65	36.364	ENSGAFG00000003211	nom1	78	36.564	Gambusia_affinis
FBgn0035336	CG9004	84	34.718	ENSGAGG00000014347	NOM1	63	40.789	Gopherus_agassizii
FBgn0035336	CG9004	62	39.139	ENSGGOG00000010920	NOM1	56	39.179	Gorilla_gorilla
FBgn0035336	CG9004	60	38.252	ENSHBUG00000014616	nom1	68	36.976	Haplochromis_burtoni
FBgn0035336	CG9004	83	34.362	ENSHGLG00000007392	NOM1	60	37.828	Heterocephalus_glaber_female
FBgn0035336	CG9004	83	34.362	ENSHGLG00100014407	NOM1	60	37.828	Heterocephalus_glaber_male
FBgn0035336	CG9004	60	38.964	ENSIPUG00000013980	nom1	86	35.061	Ictalurus_punctatus
FBgn0035336	CG9004	59	39.804	ENSSTOG00000031736	NOM1	87	39.804	Ictidomys_tridecemlineatus
FBgn0035336	CG9004	55	38.608	ENSJJAG00000011716	Nom1	98	37.876	Jaculus_jaculus
FBgn0035336	CG9004	59	39.961	ENSLBEG00000009252	nom1	58	39.961	Labrus_bergylta
FBgn0035336	CG9004	77	37.104	ENSLACG00000011777	NOM1	60	39.530	Latimeria_chalumnae
FBgn0035336	CG9004	84	35.488	ENSLOCG00000012452	nom1	69	37.158	Lepisosteus_oculatus
FBgn0035336	CG9004	61	36.622	ENSLAFG00000007119	NOM1	62	36.622	Loxodonta_africana
FBgn0035336	CG9004	62	36.449	ENSMMUG00000039033	NOM1	66	35.225	Macaca_mulatta
FBgn0035336	CG9004	62	39.400	ENSMLEG00000037062	NOM1	98	39.400	Mandrillus_leucophaeus
FBgn0035336	CG9004	77	33.621	ENSMAMG00000004118	nom1	60	36.038	Mastacembelus_armatus
FBgn0035336	CG9004	60	38.104	ENSMZEG00005000384	nom1	67	36.806	Maylandia_zebra
FBgn0035336	CG9004	61	40.607	ENSMGAG00000005051	NOM1	75	40.797	Meleagris_gallopavo
FBgn0035336	CG9004	77	35.392	ENSMAUG00000017988	Nom1	63	38.776	Mesocricetus_auratus
FBgn0035336	CG9004	62	38.230	ENSMICG00000017531	NOM1	61	38.230	Microcebus_murinus
FBgn0035336	CG9004	56	38.351	ENSMMOG00000004419	nom1	56	38.351	Mola_mola
FBgn0035336	CG9004	62	38.219	ENSMODG00000005177	NOM1	62	38.519	Monodelphis_domestica
FBgn0035336	CG9004	76	35.810	ENSMALG00000008800	nom1	68	36.396	Monopterus_albus
FBgn0035336	CG9004	78	35.601	MGP_CAROLIEiJ_G0027043	Nom1	59	38.641	Mus_caroli
FBgn0035336	CG9004	78	35.810	ENSMUSG00000001569	Nom1	58	38.703	Mus_musculus
FBgn0035336	CG9004	79	35.493	MGP_SPRETEiJ_G0028039	Nom1	58	38.703	Mus_spretus
FBgn0035336	CG9004	77	36.066	ENSMPUG00000009745	NOM1	79	37.828	Mustela_putorius_furo
FBgn0035336	CG9004	68	38.167	ENSMLUG00000009129	NOM1	86	39.179	Myotis_lucifugus
FBgn0035336	CG9004	77	36.219	ENSNBRG00000016429	nom1	89	38.824	Neolamprologus_brichardi
FBgn0035336	CG9004	62	37.570	ENSNLEG00000000238	NOM1	67	35.940	Nomascus_leucogenys
FBgn0035336	CG9004	77	35.111	ENSODEG00000009399	NOM1	71	37.549	Octodon_degus
FBgn0035336	CG9004	77	34.928	ENSONIG00000005958	nom1	72	36.870	Oreochromis_niloticus
FBgn0035336	CG9004	53	37.939	ENSOANG00000006139	-	94	37.969	Ornithorhynchus_anatinus
FBgn0035336	CG9004	80	36.273	ENSOCUG00000004071	-	61	39.400	Oryctolagus_cuniculus
FBgn0035336	CG9004	75	30.154	ENSOCUG00000021448	-	71	32.523	Oryctolagus_cuniculus
FBgn0035336	CG9004	77	36.622	ENSORLG00000010541	nom1	59	38.614	Oryzias_latipes
FBgn0035336	CG9004	77	36.269	ENSORLG00020010789	nom1	64	38.614	Oryzias_latipes_hni
FBgn0035336	CG9004	60	38.150	ENSORLG00015010475	nom1	64	38.614	Oryzias_latipes_hsok
FBgn0035336	CG9004	60	38.536	ENSOMEG00000004219	nom1	86	35.193	Oryzias_melastigma
FBgn0035336	CG9004	69	36.931	ENSOGAG00000001124	NOM1	85	38.274	Otolemur_garnettii
FBgn0035336	CG9004	77	35.131	ENSOARG00000007261	NOM1	67	39.087	Ovis_aries
FBgn0035336	CG9004	80	35.261	ENSPPAG00000041374	NOM1	61	38.993	Pan_paniscus
FBgn0035336	CG9004	79	34.877	ENSPTIG00000013532	NOM1	70	38.550	Panthera_tigris_altaica
FBgn0035336	CG9004	62	38.951	ENSPTRG00000019917	NOM1	61	38.993	Pan_troglodytes
FBgn0035336	CG9004	62	39.366	ENSPANG00000007605	NOM1	60	39.366	Papio_anubis
FBgn0035336	CG9004	79	36.047	ENSPKIG00000005825	nom1	60	38.402	Paramormyrops_kingsleyae
FBgn0035336	CG9004	62	41.011	ENSPSIG00000017848	NOM1	86	41.199	Pelodiscus_sinensis
FBgn0035336	CG9004	77	35.088	ENSPMGG00000002577	nom1	78	35.757	Periophthalmus_magnuspinnatus
FBgn0035336	CG9004	77	37.519	ENSPEMG00000024180	Nom1	58	39.412	Peromyscus_maniculatus_bairdii
FBgn0035336	CG9004	59	39.842	ENSPCIG00000027941	NOM1	55	39.842	Phascolarctos_cinereus
FBgn0035336	CG9004	60	39.038	ENSPFOG00000015771	nom1	60	39.038	Poecilia_formosa
FBgn0035336	CG9004	60	38.846	ENSPLAG00000007856	nom1	77	36.850	Poecilia_latipinna
FBgn0035336	CG9004	77	35.879	ENSPMEG00000014155	nom1	77	37.021	Poecilia_mexicana
FBgn0035336	CG9004	77	35.745	ENSPREG00000008850	nom1	61	39.155	Poecilia_reticulata
FBgn0035336	CG9004	77	34.125	ENSPPYG00000018222	NOM1	56	36.542	Pongo_abelii
FBgn0035336	CG9004	50	35.363	ENSPCAG00000000440	NOM1	53	35.116	Procavia_capensis
FBgn0035336	CG9004	62	38.764	ENSPCOG00000015222	NOM1	98	38.764	Propithecus_coquereli
FBgn0035336	CG9004	77	36.432	ENSPVAG00000014760	NOM1	58	39.328	Pteropus_vampyrus
FBgn0035336	CG9004	60	38.104	ENSPNYG00000006975	nom1	90	38.039	Pundamilia_nyererei
FBgn0035336	CG9004	59	40.509	ENSPNAG00000011085	nom1	79	36.579	Pygocentrus_nattereri
FBgn0035336	CG9004	78	33.764	ENSRNOG00000048969	AABR07059041.1	61	36.276	Rattus_norvegicus
FBgn0035336	CG9004	80	37.303	ENSRBIG00000037042	NOM1	60	39.626	Rhinopithecus_bieti
FBgn0035336	CG9004	80	37.159	ENSRROG00000037293	NOM1	60	39.400	Rhinopithecus_roxellana
FBgn0035336	CG9004	53	38.074	ENSSFOG00015003196	nom1	92	38.074	Scleropages_formosus
FBgn0035336	CG9004	77	34.388	ENSSMAG00000011047	nom1	62	37.773	Scophthalmus_maximus
FBgn0035336	CG9004	60	38.760	ENSSDUG00000006834	nom1	59	38.760	Seriola_dumerili
FBgn0035336	CG9004	77	36.215	ENSSLDG00000021812	nom1	59	38.372	Seriola_lalandi_dorsalis
FBgn0035336	CG9004	81	33.154	ENSSPUG00000002556	NOM1	90	40.752	Sphenodon_punctatus
FBgn0035336	CG9004	60	38.150	ENSSPAG00000000953	nom1	59	38.150	Stegastes_partitus
FBgn0035336	CG9004	79	36.720	ENSTGUG00000000702	-	74	40.713	Taeniopygia_guttata
FBgn0035336	CG9004	59	38.402	ENSTRUG00000010239	nom1	60	38.402	Takifugu_rubripes
FBgn0035336	CG9004	81	36.143	ENSTNIG00000012783	nom1	68	37.798	Tetraodon_nigroviridis
FBgn0035336	CG9004	77	37.275	ENSTTRG00000009691	NOM1	59	39.882	Tursiops_truncatus
FBgn0035336	CG9004	62	39.623	ENSUAMG00000025450	NOM1	59	39.662	Ursus_americanus
FBgn0035336	CG9004	80	36.430	ENSUMAG00000014275	NOM1	75	39.623	Ursus_maritimus
FBgn0035336	CG9004	80	36.035	ENSVVUG00000002608	NOM1	60	39.474	Vulpes_vulpes
FBgn0035336	CG9004	80	36.017	ENSXETG00000021611	nom1	82	40.476	Xenopus_tropicalis
FBgn0035336	CG9004	77	34.864	ENSXMAG00000002451	nom1	86	35.381	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005730	nucleolus	-	ISS	Component
GO:0042274	ribosomal small subunit biogenesis	21873635.	IBA	Process