EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: FBgn0035402 (Gene tree)
Gene ID: 38375
Gene Symbol: Usp5
Alias: -
Full Name: Ubiquitin specific protease 5
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 2954
Position: chr3L: 3145405-3148358
Accession: FBgn0035402
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0307308	-	2706	-	FBpp0298309	827 (aa)	-	Q9VZU7
FBtr0073114	-	2779	-	FBpp0072976	827 (aa)	-	Q9VZU7
FBtr0445725	-	2687	-	FBpp0401600	827 (aa)	-	Q9VZU7

Gene Model

Click here to download FBgn0035402's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0035402's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001751	compound eye photoreceptor cell differentiation	24643212.	IMP	Process
GO:0004197	cysteine-type endopeptidase activity	21873635.	IBA	Function
GO:0004843	thiol-dependent ubiquitin-specific protease activity	21873635.	IBA	Function
GO:0004843	thiol-dependent ubiquitin-specific protease activity	-	ISS	Function
GO:0005634	nucleus	24292889.	HDA	Component
GO:0005737	cytoplasm	24292889.	HDA	Component
GO:0008270	zinc ion binding	-	IEA	Function
GO:0010992	ubiquitin recycling	25806519.	IMP	Process
GO:0010995	free ubiquitin chain depolymerization	25152394.	IMP	Process
GO:0016579	protein deubiquitination	21873635.	IBA	Process
GO:0016579	protein deubiquitination	-	ISS	Process
GO:0043066	negative regulation of apoptotic process	24643212.25806519.	IMP	Process
GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	25152394.	IMP	Process
GO:0046329	negative regulation of JNK cascade	24643212.	IMP	Process
GO:0071108	protein K48-linked deubiquitination	25152394.	IDA	Process
GO:0071108	protein K48-linked deubiquitination	25152394.	IMP	Process
GO:0090364	regulation of proteasome assembly	25806519.	IMP	Process
GO:1990380	Lys48-specific deubiquitinase activity	25152394.	IDA	Function