EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
FBgn0035422 (Gene tree)
Gene ID
38397
Gene Symbol
RpL28
Alias
-
Full Name
Ribosomal protein L28
Gene Type
protein_coding
Species
Drosophila_melanogaster
Status
confidence
Strand
Minus strand
Length
2050 bases
Position
chr3L:3220911-3222960
Accession
FBgn0035422
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
FBpp0072957Ribosomal_L28ePF01778.171.2e-3211
FBpp0072959Ribosomal_L28ePF01778.171.2e-3211
FBpp0072960Ribosomal_L28ePF01778.171.2e-3211
FBpp0291506Ribosomal_L28ePF01778.171.2e-3211
FBpp0291507Ribosomal_L28ePF01778.171.2e-3211
FBpp0297522Ribosomal_L28ePF01778.171.2e-3211
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27378189Global changes of the RNA bound proteome during the maternal-to-zygotic transition in DrosophilaIC & embryos.MZT2016 Jul 5Sysoev VODOI: 10.1038/ncomms12128
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
FBtr0306567-851-FBpp0297522144 (aa)-Q9VZS5
FBtr0302301-624-FBpp0291507144 (aa)-Q9VZS5
FBtr0302300-650-FBpp0291506144 (aa)-Q9VZS5
FBtr0073098-656-FBpp0072960144 (aa)-Q9VZS5
FBtr0073095-887-FBpp0072957144 (aa)-Q9VZS5
FBtr0073097-547-FBpp0072959144 (aa)-Q9VZS5
Gene Model
Click here to download FBgn0035422's gene model file
Protein-Protein Interaction (PPI)

Clik here to download FBgn0035422's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
FBgn0035422RpL289245.865ENSG00000108107RPL289450.746Homo_sapiens
FBgn0035422RpL289447.794ENSAPOG00000023913rpl289847.794Acanthochromis_polyacanthus
FBgn0035422RpL289246.617ENSAMEG00000003764RPL289646.617Ailuropoda_melanoleuca
FBgn0035422RpL289450.735ENSACIG00000014369rpl289850.735Amphilophus_citrinellus
FBgn0035422RpL289448.529ENSAOCG00000019874rpl289248.529Amphiprion_ocellaris
FBgn0035422RpL289448.529ENSAPEG00000020972rpl289848.529Amphiprion_percula
FBgn0035422RpL289449.265ENSATEG00000013839rpl289849.265Anabas_testudineus
FBgn0035422RpL289546.715ENSACAG00000015980-9946.715Anolis_carolinensis
FBgn0035422RpL289436.029ENSACAG00000006100-9836.029Anolis_carolinensis
FBgn0035422RpL289245.865ENSANAG00000034536RPL289450.746Aotus_nancymaae
FBgn0035422RpL289450.735ENSACLG00000027917rpl289650.735Astatotilapia_calliptera
FBgn0035422RpL289545.985ENSAMXG00000042541rpl289846.324Astyanax_mexicanus
FBgn0035422RpL289345.522ENSBTAG00000023343RPL286346.970Bos_taurus
FBgn0035422RpL288539.344WBGene00004442rpl-289039.344Caenorhabditis_elegans
FBgn0035422RpL289245.865ENSCJAG00000000869RPL289645.865Callithrix_jacchus
FBgn0035422RpL289247.368ENSCAFG00000002585RPL289647.368Canis_familiaris
FBgn0035422RpL289247.368ENSCAFG00020015496-9647.368Canis_lupus_dingo
FBgn0035422RpL285048.611ENSCAFG00020007821-5548.611Canis_lupus_dingo
FBgn0035422RpL289248.120ENSCAFG00020024049-9648.120Canis_lupus_dingo
FBgn0035422RpL289048.092ENSCHIG00000025540-9348.092Capra_hircus
FBgn0035422RpL289332.836ENSCHIG00000010485-8834.375Capra_hircus
FBgn0035422RpL287541.667ENSTSYG00000032922-9241.667Carlito_syrichta
FBgn0035422RpL289030.000ENSTSYG00000036697-8330.000Carlito_syrichta
FBgn0035422RpL289245.865ENSTSYG00000033853RPL289645.865Carlito_syrichta
FBgn0035422RpL289146.565ENSCAPG00000007161-9446.565Cavia_aperea
FBgn0035422RpL289146.565ENSCPOG00000012833-9446.565Cavia_porcellus
FBgn0035422RpL289145.802ENSCPOG00000023112-9445.802Cavia_porcellus
FBgn0035422RpL289245.865ENSCCAG00000025765RPL289450.746Cebus_capucinus
FBgn0035422RpL289037.692ENSCCAG00000003452-9337.692Cebus_capucinus
FBgn0035422RpL289240.909ENSCCAG00000018730-9540.909Cebus_capucinus
FBgn0035422RpL289535.036ENSCCAG00000012793-9835.036Cebus_capucinus
FBgn0035422RpL288938.760ENSCATG00000039353-9138.760Cercocebus_atys
FBgn0035422RpL289245.865ENSCATG00000031417RPL289450.746Cercocebus_atys
FBgn0035422RpL289146.565ENSCLAG00000000684RPL289446.565Chinchilla_lanigera
FBgn0035422RpL289245.865ENSCSAG00000001738-9645.865Chlorocebus_sabaeus
FBgn0035422RpL288645.161ENSCSAG00000018419-9045.161Chlorocebus_sabaeus
FBgn0035422RpL287548.148ENSCPBG00000008298RPL286648.148Chrysemys_picta_bellii
FBgn0035422RpL288546.341ENSCSAVG00000008832-9846.341Ciona_savignyi
FBgn0035422RpL289246.970ENSCANG00000002437-9546.970Colobus_angolensis_palliatus
FBgn0035422RpL288937.500ENSCANG00000008828-9137.500Colobus_angolensis_palliatus
FBgn0035422RpL289543.796ENSCANG00000021622-9943.796Colobus_angolensis_palliatus
FBgn0035422RpL289246.970ENSCANG00000038322RPL289450.746Colobus_angolensis_palliatus
FBgn0035422RpL289036.154ENSCGRG00001019521-9336.154Cricetulus_griseus_chok1gshd
FBgn0035422RpL289245.865ENSCGRG00001023644Rpl289645.865Cricetulus_griseus_chok1gshd
FBgn0035422RpL287438.679ENSCGRG00000006958-7938.679Cricetulus_griseus_crigri
FBgn0035422RpL287546.296ENSCGRG00000004471Rpl289846.296Cricetulus_griseus_crigri
FBgn0035422RpL289449.265ENSCSEG00000001312rpl289849.265Cynoglossus_semilaevis
FBgn0035422RpL289450.000ENSCVAG00000022473rpl289850.000Cyprinodon_variegatus
FBgn0035422RpL289442.647ENSDARG00000005791rpl289443.939Danio_rerio
FBgn0035422RpL287432.847ENSDNOG00000046131RPL288432.847Dasypus_novemcinctus
FBgn0035422RpL289246.970ENSDNOG00000044172-9546.970Dasypus_novemcinctus
FBgn0035422RpL289245.113ENSDORG00000012809Rpl289645.113Dipodomys_ordii
FBgn0035422RpL288537.398ENSEBUG00000009129rpl289037.398Eptatretus_burgeri
FBgn0035422RpL289245.865ENSEASG00005020779RPL289645.865Equus_asinus_asinus
FBgn0035422RpL289645.652ENSECAG00000026938-6845.652Equus_caballus
FBgn0035422RpL289447.059ENSELUG00000001730rpl289847.059Esox_lucius
FBgn0035422RpL289245.865ENSFCAG00000005639-9645.865Felis_catus
FBgn0035422RpL288936.719ENSFCAG00000040593-7336.719Felis_catus
FBgn0035422RpL289146.565ENSFDAG00000021448RPL289446.565Fukomys_damarensis
FBgn0035422RpL289447.794ENSFHEG00000007732rpl287947.794Fundulus_heteroclitus
FBgn0035422RpL289444.853ENSGMOG00000015325rpl289844.853Gadus_morhua
FBgn0035422RpL289450.000ENSGAFG00000012973rpl289850.000Gambusia_affinis
FBgn0035422RpL289449.265ENSGACG00000016089rpl289849.265Gasterosteus_aculeatus
FBgn0035422RpL289449.265ENSGAGG00000016908RPL289849.265Gopherus_agassizii
FBgn0035422RpL289245.865ENSGGOG00000022653-9450.746Gorilla_gorilla
FBgn0035422RpL289435.294ENSGGOG00000027685-7235.036Gorilla_gorilla
FBgn0035422RpL289450.735ENSHBUG00000007390rpl289650.735Haplochromis_burtoni
FBgn0035422RpL289246.617ENSHGLG00000009865RPL289646.617Heterocephalus_glaber_female
FBgn0035422RpL289246.617ENSHGLG00100005407RPL289646.617Heterocephalus_glaber_male
FBgn0035422RpL289448.529ENSHCOG00000003134rpl289848.529Hippocampus_comes
FBgn0035422RpL289446.324ENSIPUG00000004935rpl289846.324Ictalurus_punctatus
FBgn0035422RpL289246.617ENSSTOG00000008006RPL289646.617Ictidomys_tridecemlineatus
FBgn0035422RpL289245.865ENSJJAG00000019841Rpl289645.865Jaculus_jaculus
FBgn0035422RpL289449.265ENSKMAG00000011412rpl289849.265Kryptolebias_marmoratus
FBgn0035422RpL289450.735ENSLBEG00000027857rpl289850.735Labrus_bergylta
FBgn0035422RpL287837.500ENSLACG00000011783RPL289938.938Latimeria_chalumnae
FBgn0035422RpL289450.000ENSLOCG00000003073rpl289150.000Lepisosteus_oculatus
FBgn0035422RpL289246.617ENSLAFG00000022257RPL289646.617Loxodonta_africana
FBgn0035422RpL289245.865ENSMFAG00000043131RPL289450.746Macaca_fascicularis
FBgn0035422RpL289245.865ENSMMUG00000015901RPL289450.746Macaca_mulatta
FBgn0035422RpL289245.865ENSMNEG00000032714RPL289450.746Macaca_nemestrina
FBgn0035422RpL289245.865ENSMLEG00000039619RPL289450.746Mandrillus_leucophaeus
FBgn0035422RpL289448.529ENSMAMG00000017519rpl289848.529Mastacembelus_armatus
FBgn0035422RpL289450.735ENSMZEG00005002151rpl289650.735Maylandia_zebra
FBgn0035422RpL289245.865ENSMAUG00000021147-9645.865Mesocricetus_auratus
FBgn0035422RpL289536.496ENSMAUG00000017070-9836.496Mesocricetus_auratus
FBgn0035422RpL289132.824ENSMAUG00000016592-7732.824Mesocricetus_auratus
FBgn0035422RpL289241.667ENSMAUG00000004738-9441.667Mesocricetus_auratus
FBgn0035422RpL289245.865ENSMAUG00000000783-9645.865Mesocricetus_auratus
FBgn0035422RpL289545.255ENSMICG00000000996RPL289945.255Microcebus_murinus
FBgn0035422RpL287443.925ENSMICG00000033709-9143.925Microcebus_murinus
FBgn0035422RpL289245.865ENSMOCG00000006245-9645.865Microtus_ochrogaster
FBgn0035422RpL289543.796ENSMOCG00000008075-9943.796Microtus_ochrogaster
FBgn0035422RpL289544.203ENSMOCG00000006881-9944.203Microtus_ochrogaster
FBgn0035422RpL289449.265ENSMMOG00000004489rpl289849.265Mola_mola
FBgn0035422RpL289247.368ENSMODG00000000275RPL289647.368Monodelphis_domestica
FBgn0035422RpL289447.794ENSMALG00000004571rpl289847.794Monopterus_albus
FBgn0035422RpL289245.865MGP_CAROLIEiJ_G0029130Rpl289645.865Mus_caroli
FBgn0035422RpL289245.865ENSMUSG00000030432Rpl289645.865Mus_musculus
FBgn0035422RpL289246.617MGP_PahariEiJ_G0020999Rpl289646.617Mus_pahari
FBgn0035422RpL289245.865MGP_SPRETEiJ_G0030183Rpl289645.865Mus_spretus
FBgn0035422RpL289246.617ENSMPUG00000007450RPL289646.617Mustela_putorius_furo
FBgn0035422RpL289544.526ENSMLUG00000023198-9944.526Myotis_lucifugus
FBgn0035422RpL289545.255ENSMLUG00000023789-9945.255Myotis_lucifugus
FBgn0035422RpL289032.308ENSNGAG00000001032-9932.308Nannospalax_galili
FBgn0035422RpL289246.617ENSNGAG00000016459Rpl288046.617Nannospalax_galili
FBgn0035422RpL289450.735ENSNBRG00000006729rpl288250.735Neolamprologus_brichardi
FBgn0035422RpL289245.865ENSNLEG00000010503-9450.746Nomascus_leucogenys
FBgn0035422RpL289435.294ENSNLEG00000029689-9735.294Nomascus_leucogenys
FBgn0035422RpL289246.212ENSOPRG00000000463-9546.212Ochotona_princeps
FBgn0035422RpL289146.565ENSODEG00000010391-9446.565Octodon_degus
FBgn0035422RpL289244.361ENSODEG00000019117-9644.361Octodon_degus
FBgn0035422RpL289146.565ENSODEG00000019864-9446.565Octodon_degus
FBgn0035422RpL289245.865ENSODEG00000020377-9645.865Octodon_degus
FBgn0035422RpL289450.735ENSONIG00000007486rpl289850.735Oreochromis_niloticus
FBgn0035422RpL289245.455ENSOCUG00000027112-9545.455Oryctolagus_cuniculus
FBgn0035422RpL289241.791ENSOCUG00000027875-9641.791Oryctolagus_cuniculus
FBgn0035422RpL289447.059ENSORLG00000005108rpl289847.059Oryzias_latipes
FBgn0035422RpL289447.059ENSORLG00020007182rpl289847.059Oryzias_latipes_hni
FBgn0035422RpL289447.059ENSORLG00015013944rpl289847.059Oryzias_latipes_hsok
FBgn0035422RpL289447.059ENSOMEG00000009716rpl289847.059Oryzias_melastigma
FBgn0035422RpL289545.255ENSOGAG00000025533RPL289945.255Otolemur_garnettii
FBgn0035422RpL289046.923ENSOARG00000001428RPL289346.923Ovis_aries
FBgn0035422RpL289531.387ENSPPAG00000032901-9831.387Pan_paniscus
FBgn0035422RpL289245.865ENSPPAG00000038000-9450.746Pan_paniscus
FBgn0035422RpL289135.115ENSPPAG00000034138-9335.115Pan_paniscus
FBgn0035422RpL289832.394ENSPPRG00000013998-8132.576Panthera_pardus
FBgn0035422RpL289245.865ENSPPRG00000012962-9645.865Panthera_pardus
FBgn0035422RpL289236.364ENSPPRG00000012498-9536.364Panthera_pardus
FBgn0035422RpL289245.865ENSPTIG00000011191-9645.865Panthera_tigris_altaica
FBgn0035422RpL289135.115ENSPTRG00000043676-9335.115Pan_troglodytes
FBgn0035422RpL289245.865ENSPTRG00000011505RPL289645.865Pan_troglodytes
FBgn0035422RpL289135.115ENSPTRG00000043492-9335.115Pan_troglodytes
FBgn0035422RpL289245.865ENSPANG00000029716RPL289450.746Papio_anubis
FBgn0035422RpL289445.588ENSPKIG00000014698rpl289845.588Paramormyrops_kingsleyae
FBgn0035422RpL287444.860ENSPSIG00000015206RPL288244.860Pelodiscus_sinensis
FBgn0035422RpL289449.265ENSPMGG00000004586rpl289849.265Periophthalmus_magnuspinnatus
FBgn0035422RpL289043.846ENSPEMG00000013352-9343.846Peromyscus_maniculatus_bairdii
FBgn0035422RpL289245.865ENSPEMG00000011755Rpl289645.865Peromyscus_maniculatus_bairdii
FBgn0035422RpL289745.324ENSPMAG00000008617rpl289845.324Petromyzon_marinus
FBgn0035422RpL288743.200ENSPCIG00000018601-9243.200Phascolarctos_cinereus
FBgn0035422RpL289449.265ENSPFOG00000002206rpl289849.265Poecilia_formosa
FBgn0035422RpL289449.265ENSPLAG00000003206rpl289849.265Poecilia_latipinna
FBgn0035422RpL289449.265ENSPMEG00000000595rpl289849.265Poecilia_mexicana
FBgn0035422RpL289449.265ENSPREG00000002015rpl289849.265Poecilia_reticulata
FBgn0035422RpL288134.188ENSPPYG00000029517-8334.188Pongo_abelii
FBgn0035422RpL289545.255ENSPPYG00000010417-9945.255Pongo_abelii
FBgn0035422RpL289542.336ENSPCOG00000007456-9942.336Propithecus_coquereli
FBgn0035422RpL289240.152ENSPCOG00000014236-8941.176Propithecus_coquereli
FBgn0035422RpL289545.255ENSPCOG00000017000RPL289450.746Propithecus_coquereli
FBgn0035422RpL289438.971ENSPCOG00000025957-9838.971Propithecus_coquereli
FBgn0035422RpL289246.617ENSPVAG00000007315RPL289646.617Pteropus_vampyrus
FBgn0035422RpL289450.735ENSPNYG00000004757rpl289850.735Pundamilia_nyererei
FBgn0035422RpL288948.438ENSPNAG00000003547rpl288548.438Pygocentrus_nattereri
FBgn0035422RpL289241.667ENSRNOG00000061441AABR07071935.19541.667Rattus_norvegicus
FBgn0035422RpL289241.007ENSRNOG00000009240AABR07016623.19541.007Rattus_norvegicus
FBgn0035422RpL289245.865ENSRNOG00000017127Rpl289645.865Rattus_norvegicus
FBgn0035422RpL289146.565ENSRNOG00000037673AABR07071891.29446.565Rattus_norvegicus
FBgn0035422RpL289244.361ENSRBIG00000003677-9644.361Rhinopithecus_bieti
FBgn0035422RpL289245.865ENSRBIG00000034637RPL289450.746Rhinopithecus_bieti
FBgn0035422RpL289245.865ENSRROG00000028904RPL289450.746Rhinopithecus_roxellana
FBgn0035422RpL289132.824ENSRROG00000030502-9332.824Rhinopithecus_roxellana
FBgn0035422RpL289245.865ENSSBOG00000028286RPL289450.746Saimiri_boliviensis_boliviensis
FBgn0035422RpL289734.532ENSSBOG00000034324-9534.532Saimiri_boliviensis_boliviensis
FBgn0035422RpL289447.794ENSSFOG00015012801-9847.794Scleropages_formosus
FBgn0035422RpL289447.794ENSSFOG00015001292rpl289847.794Scleropages_formosus
FBgn0035422RpL289449.265ENSSMAG00000008756rpl289849.265Scophthalmus_maximus
FBgn0035422RpL289449.265ENSSDUG00000015127rpl289849.265Seriola_dumerili
FBgn0035422RpL286935.294ENSSLDG00000009395-8135.294Seriola_lalandi_dorsalis
FBgn0035422RpL289449.265ENSSLDG00000000414rpl289849.265Seriola_lalandi_dorsalis
FBgn0035422RpL288642.742ENSSARG00000009741RPL289042.742Sorex_araneus
FBgn0035422RpL289549.635ENSSPUG00000010390RPL289849.635Sphenodon_punctatus
FBgn0035422RpL289450.000ENSSPAG00000015122rpl287050.000Stegastes_partitus
FBgn0035422RpL289146.565ENSSSCG00000039460-9446.565Sus_scrofa
FBgn0035422RpL289337.313ENSSSCG00000039543-8937.313Sus_scrofa
FBgn0035422RpL288237.288ENSSSCG00000030430-8437.288Sus_scrofa
FBgn0035422RpL289534.752ENSSSCG00000040515-7834.752Sus_scrofa
FBgn0035422RpL289448.529ENSTRUG00000025383rpl289848.529Takifugu_rubripes
FBgn0035422RpL289450.365ENSTNIG00000002577rpl289850.365Tetraodon_nigroviridis
FBgn0035422RpL289245.865ENSTTRG00000002428RPL289645.865Tursiops_truncatus
FBgn0035422RpL289246.617ENSUAMG00000017635RPL289646.617Ursus_americanus
FBgn0035422RpL288635.484ENSUAMG00000003339-9535.484Ursus_americanus
FBgn0035422RpL288535.772ENSUAMG00000002452-9335.772Ursus_americanus
FBgn0035422RpL288531.967ENSUAMG00000023977-7231.967Ursus_americanus
FBgn0035422RpL288635.484ENSUMAG00000006441-7635.484Ursus_maritimus
FBgn0035422RpL287547.222ENSUMAG00000024630-8547.222Ursus_maritimus
FBgn0035422RpL289447.794ENSXETG00000000132rpl289747.794Xenopus_tropicalis
FBgn0035422RpL289050.769ENSXCOG00000001554rpl289350.769Xiphophorus_couchianus
FBgn0035422RpL289449.265ENSXMAG00000005190rpl289849.265Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0002181cytoplasmic translation17927810.TASProcess
GO:0003735structural constituent of ribosome-IEAFunction
GO:0003735structural constituent of ribosome17927810.TASFunction
GO:0006412translation-IEAProcess
GO:0022625cytosolic large ribosomal subunit21873635.IBAComponent
GO:0022625cytosolic large ribosomal subunit17927810.TASComponent

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