EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0035520 (Gene tree)
Gene ID: 38520
Gene Symbol: CG11586
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 1174 bases
Position: chr3L:4261297-4262470
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0073099	zf-met	PF12874.7	2.7e-06	1	1
FBpp0305745	zf-met	PF12874.7	2.7e-06	1	1
FBpp0073099	zf-C2H2_jaz	PF12171.8	1.4e-06	1	1
FBpp0305745	zf-C2H2_jaz	PF12171.8	1.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0333568	-	760	-	FBpp0305745	194 (aa)	-	Q9VZF0
FBtr0073243	-	1115	-	FBpp0073099	194 (aa)	-	Q9VZF0

Gene Model

Click here to download FBgn0035520's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0035520's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0035520	CG11586	96	68.063	ENSG00000146007	ZMAT2	98	90.385	Homo_sapiens
FBgn0035520	CG11586	97	62.437	ENSAPOG00000004818	zmat2	95	60.101	Acanthochromis_polyacanthus
FBgn0035520	CG11586	96	68.063	ENSAMEG00000010766	ZMAT2	94	64.398	Ailuropoda_melanoleuca
FBgn0035520	CG11586	97	62.755	ENSACIG00000007914	zmat2	95	60.406	Amphilophus_citrinellus
FBgn0035520	CG11586	97	62.437	ENSAOCG00000016267	zmat2	95	60.101	Amphiprion_ocellaris
FBgn0035520	CG11586	97	62.437	ENSAPEG00000008887	zmat2	95	60.101	Amphiprion_percula
FBgn0035520	CG11586	97	62.944	ENSATEG00000009724	zmat2	95	60.606	Anabas_testudineus
FBgn0035520	CG11586	96	67.539	ENSACAG00000012747	ZMAT2	94	64.921	Anolis_carolinensis
FBgn0035520	CG11586	96	68.063	ENSANAG00000028921	ZMAT2	94	64.398	Aotus_nancymaae
FBgn0035520	CG11586	61	56.693	ENSACLG00000015635	-	86	57.724	Astatotilapia_calliptera
FBgn0035520	CG11586	97	62.694	ENSACLG00000000982	zmat2	95	59.596	Astatotilapia_calliptera
FBgn0035520	CG11586	97	62.694	ENSACLG00000001243	zmat2	95	59.596	Astatotilapia_calliptera
FBgn0035520	CG11586	97	60.938	ENSAMXG00000042537	zmat2	95	61.458	Astyanax_mexicanus
FBgn0035520	CG11586	96	68.063	ENSBTAG00000005441	ZMAT2	94	64.398	Bos_taurus
FBgn0035520	CG11586	96	68.063	ENSCJAG00000016231	-	94	64.398	Callithrix_jacchus
FBgn0035520	CG11586	96	67.016	ENSCJAG00000021456	-	94	63.351	Callithrix_jacchus
FBgn0035520	CG11586	96	68.063	ENSCAFG00000005907	ZMAT2	94	64.398	Canis_familiaris
FBgn0035520	CG11586	96	68.063	ENSCAFG00020000423	ZMAT2	94	64.398	Canis_lupus_dingo
FBgn0035520	CG11586	96	68.063	ENSCHIG00000014775	ZMAT2	94	64.398	Capra_hircus
FBgn0035520	CG11586	95	55.851	ENSTSYG00000032797	-	92	52.128	Carlito_syrichta
FBgn0035520	CG11586	96	68.063	ENSTSYG00000035442	-	94	64.398	Carlito_syrichta
FBgn0035520	CG11586	96	67.539	ENSCPOG00000037729	ZMAT2	94	63.874	Cavia_porcellus
FBgn0035520	CG11586	96	68.063	ENSCCAG00000024723	ZMAT2	94	64.398	Cebus_capucinus
FBgn0035520	CG11586	96	68.063	ENSCLAG00000017314	ZMAT2	94	64.398	Chinchilla_lanigera
FBgn0035520	CG11586	96	68.063	ENSCSAG00000012639	ZMAT2	94	64.398	Chlorocebus_sabaeus
FBgn0035520	CG11586	69	69.118	ENSCHOG00000007795	ZMAT2	87	69.118	Choloepus_hoffmanni
FBgn0035520	CG11586	96	67.539	ENSCPBG00000007718	ZMAT2	94	64.921	Chrysemys_picta_bellii
FBgn0035520	CG11586	76	70.470	ENSCSAVG00000008239	-	95	66.138	Ciona_savignyi
FBgn0035520	CG11586	96	68.063	ENSCANG00000039567	ZMAT2	94	64.398	Colobus_angolensis_palliatus
FBgn0035520	CG11586	96	68.063	ENSCGRG00001023749	Zmat2	94	64.398	Cricetulus_griseus_chok1gshd
FBgn0035520	CG11586	96	68.063	ENSCGRG00000013756	Zmat2	94	64.398	Cricetulus_griseus_crigri
FBgn0035520	CG11586	97	62.437	ENSCSEG00000006694	zmat2	86	58.586	Cynoglossus_semilaevis
FBgn0035520	CG11586	97	63.452	ENSCVAG00000003489	zmat2	95	61.111	Cyprinodon_variegatus
FBgn0035520	CG11586	96	61.257	ENSDARG00000004956	zmat2	95	60.733	Danio_rerio
FBgn0035520	CG11586	63	72.581	ENSDNOG00000015171	ZMAT2	98	66.935	Dasypus_novemcinctus
FBgn0035520	CG11586	96	48.947	ENSDORG00000014559	Zmat2	94	49.738	Dipodomys_ordii
FBgn0035520	CG11586	96	66.492	ENSETEG00000005406	-	94	62.827	Echinops_telfairi
FBgn0035520	CG11586	56	66.055	ENSEBUG00000015463	-	66	62.500	Eptatretus_burgeri
FBgn0035520	CG11586	96	68.063	ENSEASG00005018047	ZMAT2	94	64.398	Equus_asinus_asinus
FBgn0035520	CG11586	96	68.063	ENSECAG00000014412	ZMAT2	94	64.398	Equus_caballus
FBgn0035520	CG11586	72	72.535	ENSEEUG00000007861	ZMAT2	93	72.535	Erinaceus_europaeus
FBgn0035520	CG11586	96	66.316	ENSELUG00000021857	zmat2	92	66.316	Esox_lucius
FBgn0035520	CG11586	96	68.063	ENSFCAG00000001289	ZMAT2	94	64.398	Felis_catus
FBgn0035520	CG11586	96	67.016	ENSFALG00000008988	-	94	64.398	Ficedula_albicollis
FBgn0035520	CG11586	96	60.733	ENSFALG00000014244	-	94	59.686	Ficedula_albicollis
FBgn0035520	CG11586	96	68.063	ENSFDAG00000008372	ZMAT2	94	64.398	Fukomys_damarensis
FBgn0035520	CG11586	97	63.212	ENSFHEG00000016999	zmat2	95	60.825	Fundulus_heteroclitus
FBgn0035520	CG11586	72	67.832	ENSGMOG00000003032	zmat2	92	67.832	Gadus_morhua
FBgn0035520	CG11586	96	67.539	ENSGALG00000041746	ZMAT2	94	64.921	Gallus_gallus
FBgn0035520	CG11586	97	63.452	ENSGAFG00000009807	zmat2	96	59.091	Gambusia_affinis
FBgn0035520	CG11586	97	63.452	ENSGACG00000020892	zmat2	95	60.606	Gasterosteus_aculeatus
FBgn0035520	CG11586	96	67.539	ENSGAGG00000008849	ZMAT2	94	64.921	Gopherus_agassizii
FBgn0035520	CG11586	96	68.063	ENSGGOG00000005121	ZMAT2	94	64.398	Gorilla_gorilla
FBgn0035520	CG11586	86	64.497	ENSHBUG00000019195	zmat2	83	61.765	Haplochromis_burtoni
FBgn0035520	CG11586	97	59.898	ENSHBUG00000021112	-	92	57.576	Haplochromis_burtoni
FBgn0035520	CG11586	71	57.343	ENSHBUG00000021068	-	73	55.921	Haplochromis_burtoni
FBgn0035520	CG11586	96	68.063	ENSHGLG00000008187	-	94	64.398	Heterocephalus_glaber_female
FBgn0035520	CG11586	96	68.063	ENSHGLG00100002997	-	94	64.398	Heterocephalus_glaber_male
FBgn0035520	CG11586	97	63.452	ENSHCOG00000002199	zmat2	85	60.101	Hippocampus_comes
FBgn0035520	CG11586	96	60.209	ENSIPUG00000024080	Zmat2	95	60.733	Ictalurus_punctatus
FBgn0035520	CG11586	96	68.063	ENSSTOG00000002025	ZMAT2	94	64.398	Ictidomys_tridecemlineatus
FBgn0035520	CG11586	96	68.063	ENSJJAG00000003703	-	94	64.398	Jaculus_jaculus
FBgn0035520	CG11586	97	63.452	ENSKMAG00000005411	zmat2	95	60.101	Kryptolebias_marmoratus
FBgn0035520	CG11586	96	63.776	ENSLBEG00000002013	zmat2	95	60.406	Labrus_bergylta
FBgn0035520	CG11586	96	68.586	ENSLACG00000001030	ZMAT2	94	64.398	Latimeria_chalumnae
FBgn0035520	CG11586	96	60.733	ENSLOCG00000011219	zmat2	81	61.257	Lepisosteus_oculatus
FBgn0035520	CG11586	96	68.063	ENSLAFG00000018601	ZMAT2	94	64.398	Loxodonta_africana
FBgn0035520	CG11586	96	68.063	ENSMFAG00000037329	ZMAT2	94	64.398	Macaca_fascicularis
FBgn0035520	CG11586	96	68.063	ENSMMUG00000004484	ZMAT2	94	64.398	Macaca_mulatta
FBgn0035520	CG11586	96	68.063	ENSMNEG00000031600	ZMAT2	94	64.398	Macaca_nemestrina
FBgn0035520	CG11586	96	68.063	ENSMLEG00000041320	ZMAT2	94	64.398	Mandrillus_leucophaeus
FBgn0035520	CG11586	97	62.437	ENSMAMG00000022430	zmat2	96	60.101	Mastacembelus_armatus
FBgn0035520	CG11586	97	62.694	ENSMZEG00005027828	zmat2	95	59.596	Maylandia_zebra
FBgn0035520	CG11586	97	61.421	ENSMZEG00005001274	-	95	59.091	Maylandia_zebra
FBgn0035520	CG11586	96	67.539	ENSMGAG00000000843	ZMAT2	94	64.921	Meleagris_gallopavo
FBgn0035520	CG11586	96	47.938	ENSMAUG00000016579	Zmat2	94	47.938	Mesocricetus_auratus
FBgn0035520	CG11586	96	68.063	ENSMICG00000042843	ZMAT2	94	64.398	Microcebus_murinus
FBgn0035520	CG11586	96	66.489	ENSMOCG00000012659	Zmat2	94	62.766	Microtus_ochrogaster
FBgn0035520	CG11586	97	63.452	ENSMMOG00000016831	zmat2	95	60.101	Mola_mola
FBgn0035520	CG11586	96	68.063	ENSMODG00000011269	-	94	64.398	Monodelphis_domestica
FBgn0035520	CG11586	96	68.063	ENSMODG00000011277	-	94	64.398	Monodelphis_domestica
FBgn0035520	CG11586	97	64.948	ENSMALG00000009668	zmat2	95	63.636	Monopterus_albus
FBgn0035520	CG11586	96	68.063	MGP_CAROLIEiJ_G0022140	Zmat2	94	64.398	Mus_caroli
FBgn0035520	CG11586	96	68.063	ENSMUSG00000001383	Zmat2	94	64.398	Mus_musculus
FBgn0035520	CG11586	96	68.063	MGP_PahariEiJ_G0018874	Zmat2	94	64.398	Mus_pahari
FBgn0035520	CG11586	96	68.063	MGP_SPRETEiJ_G0023052	Zmat2	94	64.398	Mus_spretus
FBgn0035520	CG11586	96	68.063	ENSMPUG00000008383	ZMAT2	94	64.398	Mustela_putorius_furo
FBgn0035520	CG11586	96	63.351	ENSMLUG00000017525	ZMAT2	94	63.874	Myotis_lucifugus
FBgn0035520	CG11586	96	68.063	ENSNGAG00000009406	Zmat2	94	64.398	Nannospalax_galili
FBgn0035520	CG11586	97	62.694	ENSNBRG00000017902	zmat2	95	59.596	Neolamprologus_brichardi
FBgn0035520	CG11586	84	46.914	ENSNLEG00000009450	-	88	45.062	Nomascus_leucogenys
FBgn0035520	CG11586	72	72.535	ENSMEUG00000001757	ZMAT2	93	72.535	Notamacropus_eugenii
FBgn0035520	CG11586	96	68.063	ENSODEG00000002444	ZMAT2	94	64.398	Octodon_degus
FBgn0035520	CG11586	97	61.856	ENSONIG00000017873	zmat2	95	58.794	Oreochromis_niloticus
FBgn0035520	CG11586	82	70.000	ENSOANG00000007213	ZMAT2	91	66.875	Ornithorhynchus_anatinus
FBgn0035520	CG11586	96	68.063	ENSOCUG00000004255	ZMAT2	94	64.398	Oryctolagus_cuniculus
FBgn0035520	CG11586	97	64.433	ENSORLG00000024293	zmat2	95	61.026	Oryzias_latipes
FBgn0035520	CG11586	97	64.433	ENSORLG00020003239	zmat2	95	61.026	Oryzias_latipes_hni
FBgn0035520	CG11586	97	64.948	ENSORLG00015007715	zmat2	95	60.513	Oryzias_latipes_hsok
FBgn0035520	CG11586	97	64.249	ENSOMEG00000017427	zmat2	89	60.000	Oryzias_melastigma
FBgn0035520	CG11586	96	68.063	ENSOGAG00000002054	ZMAT2	94	64.398	Otolemur_garnettii
FBgn0035520	CG11586	96	68.063	ENSOARG00000018690	ZMAT2	94	64.398	Ovis_aries
FBgn0035520	CG11586	96	68.063	ENSPPAG00000034165	ZMAT2	94	64.398	Pan_paniscus
FBgn0035520	CG11586	96	68.063	ENSPPRG00000004163	ZMAT2	94	64.398	Panthera_pardus
FBgn0035520	CG11586	96	68.063	ENSPTIG00000008652	ZMAT2	94	64.398	Panthera_tigris_altaica
FBgn0035520	CG11586	96	68.063	ENSPTRG00000017327	ZMAT2	94	64.398	Pan_troglodytes
FBgn0035520	CG11586	96	63.684	ENSPANG00000032021	ZMAT2	94	63.684	Papio_anubis
FBgn0035520	CG11586	96	60.209	ENSPKIG00000017778	zmat2	95	60.733	Paramormyrops_kingsleyae
FBgn0035520	CG11586	63	71.774	ENSPSIG00000003832	ZMAT2	98	67.742	Pelodiscus_sinensis
FBgn0035520	CG11586	97	65.608	ENSPMGG00000005845	zmat2	95	62.105	Periophthalmus_magnuspinnatus
FBgn0035520	CG11586	96	68.063	ENSPEMG00000010300	Zmat2	94	64.398	Peromyscus_maniculatus_bairdii
FBgn0035520	CG11586	96	68.063	ENSPCIG00000021080	ZMAT2	94	64.398	Phascolarctos_cinereus
FBgn0035520	CG11586	97	63.452	ENSPFOG00000002482	zmat2	95	59.091	Poecilia_formosa
FBgn0035520	CG11586	97	63.452	ENSPLAG00000019239	zmat2	95	59.091	Poecilia_latipinna
FBgn0035520	CG11586	97	63.452	ENSPMEG00000024343	zmat2	95	59.091	Poecilia_mexicana
FBgn0035520	CG11586	96	68.063	ENSPPYG00000015866	ZMAT2	94	64.398	Pongo_abelii
FBgn0035520	CG11586	96	68.063	ENSPCAG00000001604	ZMAT2	94	64.398	Procavia_capensis
FBgn0035520	CG11586	96	68.063	ENSPCOG00000020829	ZMAT2	94	64.398	Propithecus_coquereli
FBgn0035520	CG11586	96	68.063	ENSPVAG00000009717	ZMAT2	94	64.398	Pteropus_vampyrus
FBgn0035520	CG11586	97	62.694	ENSPNYG00000022503	zmat2	95	59.596	Pundamilia_nyererei
FBgn0035520	CG11586	97	60.938	ENSPNAG00000013716	zmat2	95	61.458	Pygocentrus_nattereri
FBgn0035520	CG11586	96	68.063	ENSRNOG00000016016	Zmat2	94	64.398	Rattus_norvegicus
FBgn0035520	CG11586	96	68.063	ENSRBIG00000031072	ZMAT2	94	64.398	Rhinopithecus_bieti
FBgn0035520	CG11586	96	68.063	ENSRROG00000032700	ZMAT2	94	64.398	Rhinopithecus_roxellana
FBgn0035520	CG11586	96	68.063	ENSSBOG00000025911	ZMAT2	94	64.398	Saimiri_boliviensis_boliviensis
FBgn0035520	CG11586	96	68.063	ENSSHAG00000016524	ZMAT2	94	64.398	Sarcophilus_harrisii
FBgn0035520	CG11586	96	60.733	ENSSFOG00015022982	zmat2	95	61.257	Scleropages_formosus
FBgn0035520	CG11586	96	64.796	ENSSMAG00000011152	zmat2	95	61.421	Scophthalmus_maximus
FBgn0035520	CG11586	97	62.944	ENSSDUG00000023365	zmat2	95	60.606	Seriola_dumerili
FBgn0035520	CG11586	97	62.944	ENSSLDG00000008752	zmat2	95	60.606	Seriola_lalandi_dorsalis
FBgn0035520	CG11586	96	68.063	ENSSARG00000005898	ZMAT2	94	64.398	Sorex_araneus
FBgn0035520	CG11586	96	67.016	ENSSPUG00000000256	ZMAT2	94	64.398	Sphenodon_punctatus
FBgn0035520	CG11586	97	62.437	ENSSPAG00000011593	zmat2	95	60.101	Stegastes_partitus
FBgn0035520	CG11586	96	68.063	ENSSSCG00000029158	ZMAT2	94	64.398	Sus_scrofa
FBgn0035520	CG11586	96	67.539	ENSTGUG00000001696	ZMAT2	94	64.921	Taeniopygia_guttata
FBgn0035520	CG11586	97	62.944	ENSTRUG00000008262	zmat2	95	59.596	Takifugu_rubripes
FBgn0035520	CG11586	97	62.944	ENSTNIG00000007599	zmat2	95	59.091	Tetraodon_nigroviridis
FBgn0035520	CG11586	72	72.535	ENSUAMG00000004654	ZMAT2	74	72.535	Ursus_americanus
FBgn0035520	CG11586	96	68.063	ENSUMAG00000012852	ZMAT2	94	64.398	Ursus_maritimus
FBgn0035520	CG11586	61	73.950	ENSVPAG00000002463	ZMAT2	59	68.067	Vicugna_pacos
FBgn0035520	CG11586	96	68.063	ENSVVUG00000017308	ZMAT2	94	64.398	Vulpes_vulpes
FBgn0035520	CG11586	96	52.632	ENSXETG00000016118	zmat2	96	47.090	Xenopus_tropicalis
FBgn0035520	CG11586	97	65.957	ENSXMAG00000024441	zmat2	94	66.138	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0000398	mRNA splicing, via spliceosome	-	ISS	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005681	spliceosomal complex	-	IEA	Component
GO:0008270	zinc ion binding	-	IEA	Function
GO:0046540	U4/U6 x U5 tri-snRNP complex	21873635.	IBA	Component