EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0035526 (Gene tree)
Gene ID: 38526
Gene Symbol: CG1316
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 3015 bases
Position: chr3L:4283851-4286865
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0073089	RRM_1	PF00076.22	9.8e-51	1	4
FBpp0073089	RRM_1	PF00076.22	9.8e-51	2	4
FBpp0073089	RRM_1	PF00076.22	9.8e-51	3	4
FBpp0073089	RRM_1	PF00076.22	9.8e-51	4	4

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0073233	-	2222	-	FBpp0073089	470 (aa)	-	Q9VZE4

Gene Model

Click here to download FBgn0035526's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0035526's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0035526	CG1316	96	35.451	ENSG00000155636	RBM45	93	36.069	Homo_sapiens
FBgn0035526	CG1316	93	36.752	ENSAPOG00000009219	rbm45	95	34.728	Acanthochromis_polyacanthus
FBgn0035526	CG1316	96	35.163	ENSAMEG00000000896	RBM45	93	36.285	Ailuropoda_melanoleuca
FBgn0035526	CG1316	93	38.356	ENSACIG00000009234	rbm45	95	34.858	Amphilophus_citrinellus
FBgn0035526	CG1316	93	35.897	ENSAOCG00000007638	rbm45	95	35.654	Amphiprion_ocellaris
FBgn0035526	CG1316	93	36.264	ENSAPEG00000014352	rbm45	95	35.443	Amphiprion_percula
FBgn0035526	CG1316	93	35.062	ENSATEG00000016948	rbm45	95	35.129	Anabas_testudineus
FBgn0035526	CG1316	96	35.652	ENSAPLG00000011049	RBM45	83	45.361	Anas_platyrhynchos
FBgn0035526	CG1316	96	36.008	ENSANAG00000034660	RBM45	93	35.991	Aotus_nancymaae
FBgn0035526	CG1316	93	37.255	ENSACLG00000027286	rbm45	95	35.652	Astatotilapia_calliptera
FBgn0035526	CG1316	93	36.207	ENSACLG00000027201	-	95	36.207	Astatotilapia_calliptera
FBgn0035526	CG1316	96	40.964	ENSAMXG00000007463	rbm45	95	36.730	Astyanax_mexicanus
FBgn0035526	CG1316	96	36.420	ENSBTAG00000006168	RBM45	93	36.266	Bos_taurus
FBgn0035526	CG1316	96	46.853	ENSCJAG00000021516	RBM45	92	50.413	Callithrix_jacchus
FBgn0035526	CG1316	96	36.122	ENSCAFG00000013640	RBM45	93	36.538	Canis_familiaris
FBgn0035526	CG1316	96	36.008	ENSCAFG00020007013	RBM45	93	35.991	Canis_lupus_dingo
FBgn0035526	CG1316	96	36.420	ENSCHIG00000010687	RBM45	93	36.266	Capra_hircus
FBgn0035526	CG1316	96	36.008	ENSTSYG00000007757	RBM45	93	36.226	Carlito_syrichta
FBgn0035526	CG1316	96	34.783	ENSCAPG00000009388	RBM45	90	36.458	Cavia_aperea
FBgn0035526	CG1316	96	35.637	ENSCPOG00000000684	RBM45	92	35.931	Cavia_porcellus
FBgn0035526	CG1316	96	36.777	ENSCCAG00000022783	RBM45	93	36.601	Cebus_capucinus
FBgn0035526	CG1316	96	36.008	ENSCATG00000041082	RBM45	93	36.285	Cercocebus_atys
FBgn0035526	CG1316	61	38.144	ENSCLAG00000015215	RBM45	78	36.770	Chinchilla_lanigera
FBgn0035526	CG1316	96	35.656	ENSCSAG00000014231	RBM45	93	35.622	Chlorocebus_sabaeus
FBgn0035526	CG1316	96	34.783	ENSCHOG00000009809	RBM45	97	36.458	Choloepus_hoffmanni
FBgn0035526	CG1316	96	35.398	ENSCPBG00000003246	RBM45	94	34.672	Chrysemys_picta_bellii
FBgn0035526	CG1316	96	36.008	ENSCANG00000040777	RBM45	93	35.991	Colobus_angolensis_palliatus
FBgn0035526	CG1316	91	36.518	ENSCGRG00001005759	Rbm45	93	36.933	Cricetulus_griseus_chok1gshd
FBgn0035526	CG1316	91	36.518	ENSCGRG00000010816	Rbm45	93	36.933	Cricetulus_griseus_crigri
FBgn0035526	CG1316	96	33.895	ENSCSEG00000017409	rbm45	95	33.333	Cynoglossus_semilaevis
FBgn0035526	CG1316	93	34.188	ENSCVAG00000016127	rbm45	95	33.839	Cyprinodon_variegatus
FBgn0035526	CG1316	96	37.045	ENSDARG00000063731	rbm45	95	37.045	Danio_rerio
FBgn0035526	CG1316	91	36.831	ENSDNOG00000001973	RBM45	93	36.481	Dasypus_novemcinctus
FBgn0035526	CG1316	96	36.025	ENSDORG00000015831	Rbm45	93	36.443	Dipodomys_ordii
FBgn0035526	CG1316	81	44.444	ENSETEG00000013424	RBM45	73	44.444	Echinops_telfairi
FBgn0035526	CG1316	97	37.093	ENSEBUG00000007042	rbm45	96	35.762	Eptatretus_burgeri
FBgn0035526	CG1316	96	36.008	ENSEASG00005022475	RBM45	93	35.991	Equus_asinus_asinus
FBgn0035526	CG1316	96	36.008	ENSECAG00000017129	RBM45	93	35.991	Equus_caballus
FBgn0035526	CG1316	96	36.207	ENSELUG00000023238	rbm45	95	36.422	Esox_lucius
FBgn0035526	CG1316	96	35.331	ENSELUG00000020878	-	94	35.560	Esox_lucius
FBgn0035526	CG1316	96	35.802	ENSFCAG00000018793	RBM45	93	35.776	Felis_catus
FBgn0035526	CG1316	96	34.783	ENSFALG00000003330	RBM45	97	37.500	Ficedula_albicollis
FBgn0035526	CG1316	91	36.403	ENSFDAG00000006840	-	93	35.256	Fukomys_damarensis
FBgn0035526	CG1316	91	34.737	ENSFHEG00000012844	rbm45	82	34.737	Fundulus_heteroclitus
FBgn0035526	CG1316	96	38.554	ENSGMOG00000002427	rbm45	95	33.836	Gadus_morhua
FBgn0035526	CG1316	96	35.652	ENSGALG00000009202	RBM45	78	45.087	Gallus_gallus
FBgn0035526	CG1316	93	36.304	ENSGAFG00000003709	rbm45	95	34.454	Gambusia_affinis
FBgn0035526	CG1316	93	37.241	ENSGACG00000011659	rbm45	97	37.471	Gasterosteus_aculeatus
FBgn0035526	CG1316	85	33.971	ENSGAGG00000017616	RBM45	96	33.886	Gopherus_agassizii
FBgn0035526	CG1316	96	35.451	ENSGGOG00000013981	RBM45	93	35.408	Gorilla_gorilla
FBgn0035526	CG1316	93	36.207	ENSHBUG00000015980	rbm45	95	36.207	Haplochromis_burtoni
FBgn0035526	CG1316	91	36.129	ENSHGLG00000007342	RBM45	93	35.421	Heterocephalus_glaber_female
FBgn0035526	CG1316	96	35.652	ENSHGLG00100011482	-	94	37.500	Heterocephalus_glaber_male
FBgn0035526	CG1316	93	35.974	ENSHCOG00000000850	rbm45	95	35.974	Hippocampus_comes
FBgn0035526	CG1316	96	36.989	ENSIPUG00000019576	RBM45	95	36.111	Ictalurus_punctatus
FBgn0035526	CG1316	96	36.008	ENSSTOG00000002708	RBM45	93	35.565	Ictidomys_tridecemlineatus
FBgn0035526	CG1316	81	35.523	ENSJJAG00000001312	Rbm45	89	34.597	Jaculus_jaculus
FBgn0035526	CG1316	93	36.819	ENSKMAG00000007636	rbm45	95	36.009	Kryptolebias_marmoratus
FBgn0035526	CG1316	93	34.105	ENSLBEG00000002556	-	97	35.106	Labrus_bergylta
FBgn0035526	CG1316	93	34.576	ENSLBEG00000011642	rbm45	95	34.238	Labrus_bergylta
FBgn0035526	CG1316	96	38.689	ENSLACG00000003728	RBM45	95	38.248	Latimeria_chalumnae
FBgn0035526	CG1316	96	36.129	ENSLOCG00000006862	rbm45	94	35.914	Lepisosteus_oculatus
FBgn0035526	CG1316	96	35.537	ENSLAFG00000007464	RBM45	94	37.255	Loxodonta_africana
FBgn0035526	CG1316	96	36.008	ENSMFAG00000042524	RBM45	93	35.991	Macaca_fascicularis
FBgn0035526	CG1316	96	35.656	ENSMMUG00000002013	RBM45	93	35.622	Macaca_mulatta
FBgn0035526	CG1316	96	36.008	ENSMNEG00000029136	RBM45	93	35.991	Macaca_nemestrina
FBgn0035526	CG1316	96	35.656	ENSMLEG00000042404	RBM45	93	36.876	Mandrillus_leucophaeus
FBgn0035526	CG1316	93	36.943	ENSMAMG00000022413	rbm45	95	35.456	Mastacembelus_armatus
FBgn0035526	CG1316	93	36.207	ENSMZEG00005027295	rbm45	95	36.207	Maylandia_zebra
FBgn0035526	CG1316	96	34.783	ENSMGAG00000009496	RBM45	83	46.392	Meleagris_gallopavo
FBgn0035526	CG1316	96	36.511	ENSMAUG00000016948	Rbm45	93	36.989	Mesocricetus_auratus
FBgn0035526	CG1316	96	36.214	ENSMICG00000003787	RBM45	93	36.207	Microcebus_murinus
FBgn0035526	CG1316	96	36.232	ENSMOCG00000017295	Rbm45	93	36.009	Microtus_ochrogaster
FBgn0035526	CG1316	93	34.120	ENSMMOG00000006808	rbm45	87	43.548	Mola_mola
FBgn0035526	CG1316	96	36.214	ENSMODG00000009742	RBM45	93	36.052	Monodelphis_domestica
FBgn0035526	CG1316	96	35.000	ENSMALG00000022126	rbm45	97	33.987	Monopterus_albus
FBgn0035526	CG1316	91	36.093	MGP_CAROLIEiJ_G0023686	Rbm45	93	36.207	Mus_caroli
FBgn0035526	CG1316	91	36.774	ENSMUSG00000042369	Rbm45	93	36.659	Mus_musculus
FBgn0035526	CG1316	94	35.950	MGP_PahariEiJ_G0025137	Rbm45	93	36.659	Mus_pahari
FBgn0035526	CG1316	91	36.774	MGP_SPRETEiJ_G0024607	Rbm45	93	36.659	Mus_spretus
FBgn0035526	CG1316	96	35.802	ENSMPUG00000003205	RBM45	93	35.776	Mustela_putorius_furo
FBgn0035526	CG1316	96	37.372	ENSNGAG00000023886	Rbm45	93	36.831	Nannospalax_galili
FBgn0035526	CG1316	93	45.055	ENSNBRG00000008816	rbm45	94	45.055	Neolamprologus_brichardi
FBgn0035526	CG1316	96	36.066	ENSNLEG00000006080	RBM45	93	36.052	Nomascus_leucogenys
FBgn0035526	CG1316	82	38.889	ENSMEUG00000007995	-	57	38.889	Notamacropus_eugenii
FBgn0035526	CG1316	91	35.421	ENSODEG00000007959	RBM45	93	34.125	Octodon_degus
FBgn0035526	CG1316	93	36.774	ENSONIG00000001450	rbm45	97	35.319	Oreochromis_niloticus
FBgn0035526	CG1316	96	35.417	ENSOANG00000008627	RBM45	97	35.417	Ornithorhynchus_anatinus
FBgn0035526	CG1316	96	36.008	ENSOCUG00000001125	RBM45	93	36.226	Oryctolagus_cuniculus
FBgn0035526	CG1316	92	35.345	ENSORLG00000024508	rbm45	95	34.402	Oryzias_latipes
FBgn0035526	CG1316	94	35.095	ENSOMEG00000015870	rbm45	95	35.269	Oryzias_melastigma
FBgn0035526	CG1316	95	36.458	ENSOGAG00000015195	RBM45	93	35.776	Otolemur_garnettii
FBgn0035526	CG1316	96	36.052	ENSOARG00000017348	RBM45	93	36.458	Ovis_aries
FBgn0035526	CG1316	96	35.163	ENSPPAG00000026278	RBM45	93	36.069	Pan_paniscus
FBgn0035526	CG1316	96	36.008	ENSPPRG00000017073	RBM45	93	36.422	Panthera_pardus
FBgn0035526	CG1316	96	36.008	ENSPTIG00000021277	RBM45	93	36.422	Panthera_tigris_altaica
FBgn0035526	CG1316	96	35.451	ENSPTRG00000012686	RBM45	93	35.408	Pan_troglodytes
FBgn0035526	CG1316	96	36.008	ENSPANG00000016088	RBM45	93	35.991	Papio_anubis
FBgn0035526	CG1316	96	35.699	ENSPKIG00000000284	rbm45	94	35.193	Paramormyrops_kingsleyae
FBgn0035526	CG1316	87	40.964	ENSPSIG00000002884	RBM45	96	40.964	Pelodiscus_sinensis
FBgn0035526	CG1316	93	37.054	ENSPMGG00000001551	rbm45	94	36.689	Periophthalmus_magnuspinnatus
FBgn0035526	CG1316	96	36.105	ENSPEMG00000002470	Rbm45	93	37.093	Peromyscus_maniculatus_bairdii
FBgn0035526	CG1316	98	35.897	ENSPMAG00000002965	rbm45	98	36.145	Petromyzon_marinus
FBgn0035526	CG1316	96	36.420	ENSPCIG00000025402	RBM45	93	36.266	Phascolarctos_cinereus
FBgn0035526	CG1316	93	35.000	ENSPFOG00000006641	rbm45	95	35.652	Poecilia_formosa
FBgn0035526	CG1316	93	35.000	ENSPLAG00000010571	rbm45	95	35.652	Poecilia_latipinna
FBgn0035526	CG1316	93	35.000	ENSPMEG00000001067	rbm45	95	35.652	Poecilia_mexicana
FBgn0035526	CG1316	93	35.652	ENSPREG00000004579	rbm45	95	36.304	Poecilia_reticulata
FBgn0035526	CG1316	96	35.451	ENSPPYG00000012974	RBM45	93	35.408	Pongo_abelii
FBgn0035526	CG1316	61	48.500	ENSPCAG00000004338	RBM45	58	48.925	Procavia_capensis
FBgn0035526	CG1316	96	36.570	ENSPCOG00000021526	RBM45	93	36.443	Propithecus_coquereli
FBgn0035526	CG1316	96	36.008	ENSPVAG00000010390	RBM45	93	35.565	Pteropus_vampyrus
FBgn0035526	CG1316	93	30.653	ENSPNYG00000010755	rbm45	96	30.464	Pundamilia_nyererei
FBgn0035526	CG1316	96	37.339	ENSPNAG00000021750	rbm45	95	37.849	Pygocentrus_nattereri
FBgn0035526	CG1316	91	37.527	ENSRNOG00000010595	Rbm45	93	37.093	Rattus_norvegicus
FBgn0035526	CG1316	96	35.802	ENSRBIG00000033680	RBM45	93	35.991	Rhinopithecus_bieti
FBgn0035526	CG1316	96	35.802	ENSRROG00000031398	RBM45	93	35.991	Rhinopithecus_roxellana
FBgn0035526	CG1316	96	35.656	ENSSBOG00000005469	RBM45	93	35.622	Saimiri_boliviensis_boliviensis
FBgn0035526	CG1316	96	33.884	ENSSHAG00000005667	RBM45	97	36.275	Sarcophilus_harrisii
FBgn0035526	CG1316	96	38.272	ENSSFOG00015012262	rbm45	94	35.865	Scleropages_formosus
FBgn0035526	CG1316	88	34.163	ENSSMAG00000001822	rbm45	93	34.932	Scophthalmus_maximus
FBgn0035526	CG1316	93	35.805	ENSSDUG00000014461	rbm45	95	35.760	Seriola_dumerili
FBgn0035526	CG1316	93	35.805	ENSSLDG00000017621	rbm45	95	35.760	Seriola_lalandi_dorsalis
FBgn0035526	CG1316	91	30.753	ENSSPUG00000005740	RBM45	75	38.150	Sphenodon_punctatus
FBgn0035526	CG1316	93	35.394	ENSSPAG00000023188	rbm45	95	35.282	Stegastes_partitus
FBgn0035526	CG1316	96	35.597	ENSSSCG00000015996	RBM45	92	47.849	Sus_scrofa
FBgn0035526	CG1316	92	33.546	ENSTGUG00000009116	-	91	33.546	Taeniopygia_guttata
FBgn0035526	CG1316	71	35.398	ENSTGUG00000015654	-	95	37.500	Taeniopygia_guttata
FBgn0035526	CG1316	93	35.637	ENSTRUG00000005485	rbm45	95	36.009	Takifugu_rubripes
FBgn0035526	CG1316	93	34.395	ENSTNIG00000009859	rbm45	95	34.273	Tetraodon_nigroviridis
FBgn0035526	CG1316	96	31.762	ENSTTRG00000007653	RBM45	93	31.545	Tursiops_truncatus
FBgn0035526	CG1316	96	35.802	ENSUAMG00000012989	RBM45	93	35.776	Ursus_americanus
FBgn0035526	CG1316	96	36.069	ENSUMAG00000016503	RBM45	94	37.500	Ursus_maritimus
FBgn0035526	CG1316	72	38.372	ENSVPAG00000001558	RBM45	87	38.509	Vicugna_pacos
FBgn0035526	CG1316	96	36.008	ENSVVUG00000010078	RBM45	93	35.991	Vulpes_vulpes
FBgn0035526	CG1316	93	37.755	ENSXETG00000015007	rbm45	95	34.820	Xenopus_tropicalis
FBgn0035526	CG1316	93	34.783	ENSXCOG00000014247	rbm45	94	34.565	Xiphophorus_couchianus
FBgn0035526	CG1316	93	35.435	ENSXMAG00000026302	rbm45	95	36.087	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003729	mRNA binding	10908586.	ISS	Function