EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0035532 (Gene tree)
Gene ID: 38533
Gene Symbol: CG15014
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Minus strand
Length: 1155 bases
Position: chr3L:4321105-4322259
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0073196	THUMP	PF02926.17	1.8e-12	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0073340	-	1155	-	FBpp0073196	324 (aa)	-	Q9VZD8

Gene Model

Click here to download FBgn0035532's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0035532's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0035532	CG15014	87	33.779	ENSG00000066654	THUMPD1	73	34.909	Homo_sapiens
FBgn0035532	CG15014	94	32.602	ENSAPOG00000008440	thumpd1	92	32.588	Acanthochromis_polyacanthus
FBgn0035532	CG15014	91	33.548	ENSAMEG00000006257	THUMPD1	78	33.993	Ailuropoda_melanoleuca
FBgn0035532	CG15014	79	33.962	ENSACIG00000024395	thumpd1	86	33.225	Amphilophus_citrinellus
FBgn0035532	CG15014	94	32.911	ENSAOCG00000003509	thumpd1	91	32.903	Amphiprion_ocellaris
FBgn0035532	CG15014	94	32.381	ENSAPEG00000010515	thumpd1	91	32.362	Amphiprion_percula
FBgn0035532	CG15014	91	35.354	ENSATEG00000004737	thumpd1	85	34.007	Anabas_testudineus
FBgn0035532	CG15014	90	32.203	ENSAPLG00000015259	THUMPD1	81	34.959	Anas_platyrhynchos
FBgn0035532	CG15014	53	32.597	ENSACAG00000022881	-	98	32.597	Anolis_carolinensis
FBgn0035532	CG15014	88	33.788	ENSACAG00000009625	-	90	34.915	Anolis_carolinensis
FBgn0035532	CG15014	94	31.832	ENSANAG00000026882	-	78	33.562	Aotus_nancymaae
FBgn0035532	CG15014	90	32.026	ENSACLG00000004830	thumpd1	88	32.997	Astatotilapia_calliptera
FBgn0035532	CG15014	92	33.119	ENSAMXG00000012356	thumpd1	88	33.115	Astyanax_mexicanus
FBgn0035532	CG15014	94	32.317	ENSBTAG00000047673	THUMPD1	85	32.710	Bos_taurus
FBgn0035532	CG15014	91	31.861	ENSCJAG00000009499	THUMPD1	78	32.765	Callithrix_jacchus
FBgn0035532	CG15014	82	33.448	ENSCAFG00000017985	THUMPD1	78	34.106	Canis_familiaris
FBgn0035532	CG15014	82	33.448	ENSCAFG00020021861	THUMPD1	78	34.106	Canis_lupus_dingo
FBgn0035532	CG15014	91	34.194	ENSCHIG00000010134	THUMPD1	79	34.323	Capra_hircus
FBgn0035532	CG15014	86	32.886	ENSTSYG00000011537	THUMPD1	74	33.453	Carlito_syrichta
FBgn0035532	CG15014	92	33.228	ENSCPOG00000023684	-	83	31.949	Cavia_porcellus
FBgn0035532	CG15014	92	33.228	ENSCPOG00000008919	-	83	31.949	Cavia_porcellus
FBgn0035532	CG15014	94	30.488	ENSCCAG00000019379	-	68	32.056	Cebus_capucinus
FBgn0035532	CG15014	89	32.595	ENSCCAG00000030205	THUMPD1	78	33.562	Cebus_capucinus
FBgn0035532	CG15014	85	30.796	ENSCATG00000020844	-	75	31.579	Cercocebus_atys
FBgn0035532	CG15014	87	33.445	ENSCATG00000040309	THUMPD1	73	34.545	Cercocebus_atys
FBgn0035532	CG15014	89	34.754	ENSCLAG00000016508	THUMPD1	81	34.106	Chinchilla_lanigera
FBgn0035532	CG15014	87	33.445	ENSCSAG00000007610	THUMPD1	76	34.495	Chlorocebus_sabaeus
FBgn0035532	CG15014	93	31.804	ENSCHOG00000005587	THUMPD1	85	31.250	Choloepus_hoffmanni
FBgn0035532	CG15014	89	32.895	ENSCPBG00000019055	THUMPD1	81	33.333	Chrysemys_picta_bellii
FBgn0035532	CG15014	81	32.331	ENSCANG00000035822	-	82	32.331	Colobus_angolensis_palliatus
FBgn0035532	CG15014	77	30.502	ENSCANG00000038770	THUMPD1	79	30.588	Colobus_angolensis_palliatus
FBgn0035532	CG15014	89	33.123	ENSCGRG00001014829	Thumpd1	78	34.130	Cricetulus_griseus_chok1gshd
FBgn0035532	CG15014	89	33.123	ENSCGRG00000000060	Thumpd1	78	34.130	Cricetulus_griseus_crigri
FBgn0035532	CG15014	94	34.385	ENSCSEG00000002041	thumpd1	92	34.628	Cynoglossus_semilaevis
FBgn0035532	CG15014	79	32.830	ENSCVAG00000014960	thumpd1	85	32.653	Cyprinodon_variegatus
FBgn0035532	CG15014	90	30.822	ENSDARG00000100264	thumpd1	78	30.822	Danio_rerio
FBgn0035532	CG15014	89	33.540	ENSDNOG00000043510	THUMPD1	83	33.333	Dasypus_novemcinctus
FBgn0035532	CG15014	89	34.194	ENSDORG00000028216	Thumpd1	83	33.766	Dipodomys_ordii
FBgn0035532	CG15014	82	33.212	ENSETEG00000002763	THUMPD1	58	33.460	Echinops_telfairi
FBgn0035532	CG15014	81	30.634	ENSEBUG00000011011	THUMPD1	71	30.741	Eptatretus_burgeri
FBgn0035532	CG15014	92	32.692	ENSECAG00000005354	THUMPD1	80	32.787	Equus_caballus
FBgn0035532	CG15014	79	35.185	ENSEEUG00000011256	THUMPD1	60	35.878	Erinaceus_europaeus
FBgn0035532	CG15014	91	33.670	ENSELUG00000013612	thumpd1	58	37.079	Esox_lucius
FBgn0035532	CG15014	91	31.776	ENSFCAG00000039296	THUMPD1	83	32.166	Felis_catus
FBgn0035532	CG15014	71	34.914	ENSFALG00000014029	THUMPD1	95	33.452	Ficedula_albicollis
FBgn0035532	CG15014	82	34.328	ENSFHEG00000013319	thumpd1	88	30.503	Fundulus_heteroclitus
FBgn0035532	CG15014	85	34.589	ENSGMOG00000003369	thumpd1	85	34.256	Gadus_morhua
FBgn0035532	CG15014	87	32.517	ENSGAFG00000011000	thumpd1	85	33.217	Gambusia_affinis
FBgn0035532	CG15014	82	32.971	ENSGACG00000019511	thumpd1	74	34.118	Gasterosteus_aculeatus
FBgn0035532	CG15014	89	32.119	ENSGAGG00000008225	THUMPD1	89	32.566	Gopherus_agassizii
FBgn0035532	CG15014	63	30.622	ENSGGOG00000043232	-	67	32.719	Gorilla_gorilla
FBgn0035532	CG15014	97	32.326	ENSGGOG00000005231	-	63	32.653	Gorilla_gorilla
FBgn0035532	CG15014	90	32.026	ENSHBUG00000017996	thumpd1	88	32.660	Haplochromis_burtoni
FBgn0035532	CG15014	91	34.185	ENSHGLG00000011001	-	83	33.226	Heterocephalus_glaber_female
FBgn0035532	CG15014	91	34.185	ENSHGLG00100016023	THUMPD1	83	33.226	Heterocephalus_glaber_male
FBgn0035532	CG15014	72	32.520	ENSHCOG00000008618	thumpd1	50	33.333	Hippocampus_comes
FBgn0035532	CG15014	90	33.775	ENSIPUG00000012500	thumpd1	67	32.558	Ictalurus_punctatus
FBgn0035532	CG15014	93	31.889	ENSSTOG00000007011	THUMPD1	84	32.278	Ictidomys_tridecemlineatus
FBgn0035532	CG15014	94	33.631	ENSJJAG00000004295	-	83	35.048	Jaculus_jaculus
FBgn0035532	CG15014	85	35.379	ENSLBEG00000009349	thumpd1	86	34.797	Labrus_bergylta
FBgn0035532	CG15014	92	33.437	ENSLACG00000005833	THUMPD1	87	30.960	Latimeria_chalumnae
FBgn0035532	CG15014	90	33.446	ENSLOCG00000000854	thumpd1	90	34.680	Lepisosteus_oculatus
FBgn0035532	CG15014	89	32.484	ENSLAFG00000025838	THUMPD1	80	32.026	Loxodonta_africana
FBgn0035532	CG15014	87	33.445	ENSMFAG00000036996	THUMPD1	73	34.545	Macaca_fascicularis
FBgn0035532	CG15014	81	30.258	ENSMFAG00000041474	-	82	31.086	Macaca_fascicularis
FBgn0035532	CG15014	87	33.445	ENSMMUG00000004225	THUMPD1	73	34.545	Macaca_mulatta
FBgn0035532	CG15014	72	30.380	ENSMNEG00000038856	-	70	31.330	Macaca_nemestrina
FBgn0035532	CG15014	87	33.445	ENSMNEG00000020726	THUMPD1	73	34.545	Macaca_nemestrina
FBgn0035532	CG15014	81	30.741	ENSMLEG00000030012	-	81	31.579	Mandrillus_leucophaeus
FBgn0035532	CG15014	87	33.445	ENSMLEG00000036436	THUMPD1	73	34.545	Mandrillus_leucophaeus
FBgn0035532	CG15014	93	32.353	ENSMAMG00000006858	thumpd1	86	32.026	Mastacembelus_armatus
FBgn0035532	CG15014	90	32.026	ENSMZEG00005013693	thumpd1	88	32.660	Maylandia_zebra
FBgn0035532	CG15014	60	34.450	ENSMGAG00000010340	THUMPD1	74	37.013	Meleagris_gallopavo
FBgn0035532	CG15014	89	33.123	ENSMAUG00000013306	Thumpd1	78	33.788	Mesocricetus_auratus
FBgn0035532	CG15014	89	32.797	ENSMICG00000038483	-	76	33.101	Microcebus_murinus
FBgn0035532	CG15014	89	34.069	ENSMOCG00000003447	Thumpd1	78	34.471	Microtus_ochrogaster
FBgn0035532	CG15014	83	33.214	ENSMMOG00000011323	thumpd1	77	31.429	Mola_mola
FBgn0035532	CG15014	88	34.114	ENSMODG00000024776	-	81	34.385	Monodelphis_domestica
FBgn0035532	CG15014	98	32.749	ENSMODG00000006971	-	80	34.700	Monodelphis_domestica
FBgn0035532	CG15014	79	33.585	ENSMALG00000019522	thumpd1	92	30.844	Monopterus_albus
FBgn0035532	CG15014	86	31.894	MGP_CAROLIEiJ_G0030382	Thumpd1	76	34.875	Mus_caroli
FBgn0035532	CG15014	86	33.770	ENSMUSG00000030942	Thumpd1	76	35.231	Mus_musculus
FBgn0035532	CG15014	89	35.048	MGP_PahariEiJ_G0013593	Thumpd1	78	36.426	Mus_pahari
FBgn0035532	CG15014	88	33.887	ENSMLUG00000010547	THUMPD1	79	34.007	Myotis_lucifugus
FBgn0035532	CG15014	89	32.797	ENSNGAG00000018643	Thumpd1	76	34.146	Nannospalax_galili
FBgn0035532	CG15014	90	32.353	ENSNBRG00000006987	thumpd1	82	33.333	Neolamprologus_brichardi
FBgn0035532	CG15014	87	35.254	ENSNLEG00000012369	THUMPD1	73	34.182	Nomascus_leucogenys
FBgn0035532	CG15014	70	45.000	ENSOPRG00000011342	THUMPD1	58	46.429	Ochotona_princeps
FBgn0035532	CG15014	89	34.084	ENSODEG00000012360	THUMPD1	81	33.224	Octodon_degus
FBgn0035532	CG15014	84	33.449	ENSONIG00000000146	thumpd1	92	33.692	Oreochromis_niloticus
FBgn0035532	CG15014	91	37.255	ENSOANG00000014297	THUMPD1	78	35.235	Ornithorhynchus_anatinus
FBgn0035532	CG15014	51	32.418	ENSOCUG00000025354	-	83	32.418	Oryctolagus_cuniculus
FBgn0035532	CG15014	89	33.962	ENSOCUG00000009895	-	84	34.084	Oryctolagus_cuniculus
FBgn0035532	CG15014	98	30.864	ENSORLG00000027557	thumpd1	89	31.293	Oryzias_latipes
FBgn0035532	CG15014	83	31.636	ENSORLG00020010206	thumpd1	89	31.293	Oryzias_latipes_hni
FBgn0035532	CG15014	83	31.636	ENSORLG00015009581	thumpd1	89	31.293	Oryzias_latipes_hsok
FBgn0035532	CG15014	85	30.961	ENSOMEG00000019361	thumpd1	88	31.373	Oryzias_melastigma
FBgn0035532	CG15014	86	33.559	ENSOGAG00000026723	THUMPD1	77	33.677	Otolemur_garnettii
FBgn0035532	CG15014	91	34.516	ENSOARG00000013107	THUMPD1	79	34.983	Ovis_aries
FBgn0035532	CG15014	97	31.737	ENSPPAG00000033818	-	63	33.447	Pan_paniscus
FBgn0035532	CG15014	93	31.902	ENSPPRG00000014118	-	83	32.484	Panthera_pardus
FBgn0035532	CG15014	93	32.209	ENSPTIG00000013856	-	83	32.803	Panthera_tigris_altaica
FBgn0035532	CG15014	97	31.737	ENSPTRG00000007848	THUMPD1	63	33.447	Pan_troglodytes
FBgn0035532	CG15014	81	30.258	ENSPANG00000034881	-	82	31.086	Papio_anubis
FBgn0035532	CG15014	87	33.445	ENSPANG00000025507	THUMPD1	73	34.545	Papio_anubis
FBgn0035532	CG15014	84	36.000	ENSPKIG00000014491	thumpd1	75	36.538	Paramormyrops_kingsleyae
FBgn0035532	CG15014	75	35.366	ENSPSIG00000012430	THUMPD1	79	35.772	Pelodiscus_sinensis
FBgn0035532	CG15014	80	32.576	ENSPMGG00000014479	thumpd1	82	34.553	Periophthalmus_magnuspinnatus
FBgn0035532	CG15014	61	34.146	ENSPMAG00000001389	thumpd1	81	31.797	Petromyzon_marinus
FBgn0035532	CG15014	94	33.019	ENSPCIG00000029241	THUMPD1	58	34.286	Phascolarctos_cinereus
FBgn0035532	CG15014	90	32.770	ENSPFOG00000012649	thumpd1	87	33.446	Poecilia_formosa
FBgn0035532	CG15014	90	32.542	ENSPLAG00000000137	thumpd1	87	33.220	Poecilia_latipinna
FBgn0035532	CG15014	90	32.542	ENSPMEG00000007750	thumpd1	87	33.220	Poecilia_mexicana
FBgn0035532	CG15014	75	34.553	ENSPREG00000000144	thumpd1	78	35.366	Poecilia_reticulata
FBgn0035532	CG15014	69	32.068	ENSPPYG00000007160	-	74	32.353	Pongo_abelii
FBgn0035532	CG15014	57	35.263	ENSPCAG00000001534	THUMPD1	65	33.679	Procavia_capensis
FBgn0035532	CG15014	89	33.119	ENSPCOG00000024663	THUMPD1	81	32.566	Propithecus_coquereli
FBgn0035532	CG15014	79	32.222	ENSPVAG00000005659	-	68	32.824	Pteropus_vampyrus
FBgn0035532	CG15014	90	32.026	ENSPNYG00000007061	thumpd1	87	32.660	Pundamilia_nyererei
FBgn0035532	CG15014	85	32.975	ENSPNAG00000024872	thumpd1	87	32.975	Pygocentrus_nattereri
FBgn0035532	CG15014	51	32.597	ENSRNOG00000014946	AABR07005588.1	82	32.597	Rattus_norvegicus
FBgn0035532	CG15014	89	33.123	ENSRBIG00000040752	THUMPD1	78	34.130	Rhinopithecus_bieti
FBgn0035532	CG15014	81	31.985	ENSRBIG00000040136	-	85	32.836	Rhinopithecus_bieti
FBgn0035532	CG15014	89	33.123	ENSRROG00000042189	THUMPD1	78	34.130	Rhinopithecus_roxellana
FBgn0035532	CG15014	81	31.618	ENSRROG00000045699	-	85	32.463	Rhinopithecus_roxellana
FBgn0035532	CG15014	90	32.177	ENSSBOG00000034246	THUMPD1	78	32.877	Saimiri_boliviensis_boliviensis
FBgn0035532	CG15014	75	34.146	ENSSHAG00000003853	THUMPD1	69	35.361	Sarcophilus_harrisii
FBgn0035532	CG15014	94	32.808	ENSSMAG00000000723	thumpd1	90	31.410	Scophthalmus_maximus
FBgn0035532	CG15014	94	32.698	ENSSDUG00000014502	thumpd1	88	33.333	Seriola_dumerili
FBgn0035532	CG15014	94	33.016	ENSSLDG00000007694	thumpd1	88	33.660	Seriola_lalandi_dorsalis
FBgn0035532	CG15014	88	32.168	ENSSPUG00000005096	THUMPD1	87	30.247	Sphenodon_punctatus
FBgn0035532	CG15014	93	33.654	ENSSPAG00000006993	thumpd1	92	34.194	Stegastes_partitus
FBgn0035532	CG15014	93	33.028	ENSSSCG00000024748	THUMPD1	85	32.812	Sus_scrofa
FBgn0035532	CG15014	89	36.082	ENSTGUG00000009247	THUMPD1	99	35.739	Taeniopygia_guttata
FBgn0035532	CG15014	92	32.803	ENSTRUG00000015656	thumpd1	88	34.106	Takifugu_rubripes
FBgn0035532	CG15014	82	34.307	ENSTNIG00000001584	thumpd1	79	34.118	Tetraodon_nigroviridis
FBgn0035532	CG15014	91	32.595	ENSTBEG00000005252	THUMPD1	73	32.039	Tupaia_belangeri
FBgn0035532	CG15014	93	32.416	ENSTTRG00000016435	THUMPD1	85	31.875	Tursiops_truncatus
FBgn0035532	CG15014	91	34.194	ENSVPAG00000003422	THUMPD1	80	34.323	Vicugna_pacos
FBgn0035532	CG15014	91	32.087	ENSVVUG00000023241	THUMPD1	83	32.484	Vulpes_vulpes
FBgn0035532	CG15014	55	36.464	ENSXETG00000005539	thumpd1	60	36.464	Xenopus_tropicalis
FBgn0035532	CG15014	82	32.714	ENSXMAG00000026052	thumpd1	87	33.220	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0006400	tRNA modification	21873635.	IBA	Process