EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0035534 (Gene tree)
Gene ID: 38535
Gene Symbol: mRpS6
Alias: -
Full Name: mitochondrial ribosomal protein S6
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 694 bases
Position: chr3L:4364550-4365243
Accession: FBgn0035534
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0073144	Ribosomal_S6	PF01250.17	4.9e-15	1	1
FBpp0297230	Ribosomal_S6	PF01250.17	4.9e-15	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0073288	-	535	-	FBpp0073144	147 (aa)	-	Q9VZD5
FBtr0306093	-	628	-	FBpp0297230	147 (aa)	-	Q9VZD5

Gene Model

Click here to download FBgn0035534's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0035534's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0035534	mRpS6	71	39.048	ENSIPUG00000017800	-	96	39.048	Ictalurus_punctatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	11279123.11402041.	ISS	Function
GO:0003735	structural constituent of ribosome	17927810.	TAS	Function
GO:0005763	mitochondrial small ribosomal subunit	21873635.	IBA	Component
GO:0005763	mitochondrial small ribosomal subunit	11279123.11402041.	ISS	Component
GO:0005763	mitochondrial small ribosomal subunit	17927810.	TAS	Component
GO:0006412	translation	11279123.	ISS	Process
GO:0032543	mitochondrial translation	11402041.	ISS	Process
GO:0032543	mitochondrial translation	17927810.	TAS	Process
GO:0070181	small ribosomal subunit rRNA binding	21873635.	IBA	Function