EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0035692 (Gene tree)
Gene ID: 38720
Gene Symbol: Sf3b6
Alias: -
Full Name: Splicing factor 3b subunit 6
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 1056 bases
Position: chr3L:6192124-6193179
Accession: FBgn0035692
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0076723	RRM_1	PF00076.22	2.4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0077015	-	920	-	FBpp0076723	121 (aa)	-	Q9VRV7

Gene Model

Click here to download FBgn0035692's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0035692's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0035692	Sf3b6	95	77.391	ENSG00000115128	SF3B6	92	77.391	Homo_sapiens
FBgn0035692	Sf3b6	95	77.391	ENSAPOG00000023788	sf3b6	92	77.391	Acanthochromis_polyacanthus
FBgn0035692	Sf3b6	95	77.391	ENSAMEG00000002786	SF3B6	92	77.391	Ailuropoda_melanoleuca
FBgn0035692	Sf3b6	95	77.391	ENSACIG00000012608	sf3b6	92	77.391	Amphilophus_citrinellus
FBgn0035692	Sf3b6	95	77.391	ENSAOCG00000013394	sf3b6	92	77.391	Amphiprion_ocellaris
FBgn0035692	Sf3b6	95	77.391	ENSAPEG00000015311	sf3b6	92	77.391	Amphiprion_percula
FBgn0035692	Sf3b6	95	77.391	ENSATEG00000016569	sf3b6	92	77.391	Anabas_testudineus
FBgn0035692	Sf3b6	95	77.391	ENSACAG00000011677	SF3B6	92	77.391	Anolis_carolinensis
FBgn0035692	Sf3b6	95	77.391	ENSANAG00000027284	SF3B6	88	77.391	Aotus_nancymaae
FBgn0035692	Sf3b6	95	77.391	ENSACLG00000007793	sf3b6	92	77.391	Astatotilapia_calliptera
FBgn0035692	Sf3b6	95	77.391	ENSAMXG00000034888	sf3b6	92	77.391	Astyanax_mexicanus
FBgn0035692	Sf3b6	95	77.391	ENSBTAG00000003407	SF3B6	92	77.391	Bos_taurus
FBgn0035692	Sf3b6	95	75.652	ENSBTAG00000049128	-	92	75.652	Bos_taurus
FBgn0035692	Sf3b6	94	70.435	WBGene00016808	C50D2.5	83	70.435	Caenorhabditis_elegans
FBgn0035692	Sf3b6	95	77.391	ENSCJAG00000007716	SF3B6	92	77.391	Callithrix_jacchus
FBgn0035692	Sf3b6	95	77.391	ENSCAFG00000003957	SF3B6	92	77.391	Canis_familiaris
FBgn0035692	Sf3b6	95	77.391	ENSCAFG00020025576	SF3B6	92	77.391	Canis_lupus_dingo
FBgn0035692	Sf3b6	95	77.391	ENSCHIG00000009902	SF3B6	92	77.391	Capra_hircus
FBgn0035692	Sf3b6	95	77.391	ENSTSYG00000013978	SF3B6	92	77.391	Carlito_syrichta
FBgn0035692	Sf3b6	92	78.378	ENSCAPG00000016302	SF3B6	91	78.378	Cavia_aperea
FBgn0035692	Sf3b6	95	77.391	ENSCPOG00000008016	SF3B6	93	76.522	Cavia_porcellus
FBgn0035692	Sf3b6	95	77.391	ENSCCAG00000036653	SF3B6	92	77.391	Cebus_capucinus
FBgn0035692	Sf3b6	91	77.273	ENSCCAG00000018894	-	86	77.273	Cebus_capucinus
FBgn0035692	Sf3b6	95	77.391	ENSCATG00000030936	SF3B6	92	77.391	Cercocebus_atys
FBgn0035692	Sf3b6	95	77.391	ENSCLAG00000014512	SF3B6	94	77.391	Chinchilla_lanigera
FBgn0035692	Sf3b6	95	77.391	ENSCSAG00000008390	SF3B6	92	77.391	Chlorocebus_sabaeus
FBgn0035692	Sf3b6	95	77.391	ENSCHOG00000000689	SF3B6	92	77.391	Choloepus_hoffmanni
FBgn0035692	Sf3b6	76	75.000	ENSCHOG00000013886	-	78	75.000	Choloepus_hoffmanni
FBgn0035692	Sf3b6	95	77.391	ENSCPBG00000020042	SF3B6	92	77.391	Chrysemys_picta_bellii
FBgn0035692	Sf3b6	95	73.043	ENSCING00000012689	-	91	73.043	Ciona_intestinalis
FBgn0035692	Sf3b6	95	77.391	ENSCANG00000030559	SF3B6	92	77.391	Colobus_angolensis_palliatus
FBgn0035692	Sf3b6	95	77.391	ENSCGRG00001014595	Sf3b6	94	77.679	Cricetulus_griseus_chok1gshd
FBgn0035692	Sf3b6	95	77.391	ENSCGRG00000005272	Sf3b6	94	77.679	Cricetulus_griseus_crigri
FBgn0035692	Sf3b6	95	76.522	ENSCSEG00000019017	sf3b6	92	76.522	Cynoglossus_semilaevis
FBgn0035692	Sf3b6	95	76.522	ENSCVAG00000005055	sf3b6	92	76.522	Cyprinodon_variegatus
FBgn0035692	Sf3b6	95	77.391	ENSDARG00000009753	sf3b6	92	77.391	Danio_rerio
FBgn0035692	Sf3b6	95	77.391	ENSDNOG00000007148	SF3B6	92	77.391	Dasypus_novemcinctus
FBgn0035692	Sf3b6	92	65.487	ENSDORG00000029761	-	88	65.487	Dipodomys_ordii
FBgn0035692	Sf3b6	92	65.487	ENSDORG00000027390	-	88	65.487	Dipodomys_ordii
FBgn0035692	Sf3b6	95	77.391	ENSDORG00000009772	Sf3b6	92	77.391	Dipodomys_ordii
FBgn0035692	Sf3b6	92	78.378	ENSEBUG00000004424	sf3b6	87	78.378	Eptatretus_burgeri
FBgn0035692	Sf3b6	95	67.826	ENSEASG00005008061	-	92	67.826	Equus_asinus_asinus
FBgn0035692	Sf3b6	95	77.391	ENSEASG00005009993	SF3B6	92	77.391	Equus_asinus_asinus
FBgn0035692	Sf3b6	77	75.269	ENSECAG00000027755	-	79	75.269	Equus_caballus
FBgn0035692	Sf3b6	74	86.667	ENSECAG00000015618	SF3B6	83	86.667	Equus_caballus
FBgn0035692	Sf3b6	95	75.652	ENSELUG00000010379	sf3b6	92	75.652	Esox_lucius
FBgn0035692	Sf3b6	95	77.391	ENSFCAG00000031365	SF3B6	92	77.391	Felis_catus
FBgn0035692	Sf3b6	95	77.391	ENSFALG00000001651	SF3B6	92	77.391	Ficedula_albicollis
FBgn0035692	Sf3b6	95	77.391	ENSFDAG00000007864	SF3B6	92	77.391	Fukomys_damarensis
FBgn0035692	Sf3b6	95	76.522	ENSFHEG00000000685	sf3b6	92	76.522	Fundulus_heteroclitus
FBgn0035692	Sf3b6	95	74.783	ENSGMOG00000005123	sf3b6	92	74.783	Gadus_morhua
FBgn0035692	Sf3b6	72	77.011	ENSGALG00000016501	SF3B6	96	77.011	Gallus_gallus
FBgn0035692	Sf3b6	95	77.391	ENSGAFG00000009334	sf3b6	92	77.391	Gambusia_affinis
FBgn0035692	Sf3b6	95	76.522	ENSGACG00000004803	sf3b6	92	76.522	Gasterosteus_aculeatus
FBgn0035692	Sf3b6	95	77.391	ENSGAGG00000012240	SF3B6	92	77.391	Gopherus_agassizii
FBgn0035692	Sf3b6	95	77.391	ENSGGOG00000040806	SF3B6	92	77.391	Gorilla_gorilla
FBgn0035692	Sf3b6	95	77.391	ENSHBUG00000012556	sf3b6	92	77.391	Haplochromis_burtoni
FBgn0035692	Sf3b6	95	77.391	ENSHGLG00000014895	SF3B14	92	77.391	Heterocephalus_glaber_female
FBgn0035692	Sf3b6	95	77.391	ENSHGLG00100008639	SF3B14	92	77.391	Heterocephalus_glaber_male
FBgn0035692	Sf3b6	95	76.522	ENSHCOG00000019962	sf3b6	92	76.522	Hippocampus_comes
FBgn0035692	Sf3b6	95	77.391	ENSIPUG00000023800	sf3b6	92	77.391	Ictalurus_punctatus
FBgn0035692	Sf3b6	95	77.391	ENSJJAG00000021819	Sf3b6	92	77.391	Jaculus_jaculus
FBgn0035692	Sf3b6	95	77.391	ENSKMAG00000004000	sf3b6	92	77.391	Kryptolebias_marmoratus
FBgn0035692	Sf3b6	95	75.652	ENSLBEG00000022937	sf3b6	92	75.652	Labrus_bergylta
FBgn0035692	Sf3b6	95	77.391	ENSLACG00000014326	SF3B6	92	77.391	Latimeria_chalumnae
FBgn0035692	Sf3b6	95	77.391	ENSLOCG00000016481	sf3b6	92	77.391	Lepisosteus_oculatus
FBgn0035692	Sf3b6	95	77.391	ENSLAFG00000029423	SF3B6	92	77.391	Loxodonta_africana
FBgn0035692	Sf3b6	95	77.391	ENSMFAG00000038178	SF3B6	92	77.391	Macaca_fascicularis
FBgn0035692	Sf3b6	95	77.391	ENSMMUG00000001282	SF3B6	92	77.391	Macaca_mulatta
FBgn0035692	Sf3b6	95	77.391	ENSMNEG00000029050	SF3B6	92	77.391	Macaca_nemestrina
FBgn0035692	Sf3b6	95	77.391	ENSMLEG00000019896	SF3B6	92	77.391	Mandrillus_leucophaeus
FBgn0035692	Sf3b6	74	86.667	ENSMAMG00000007713	sf3b6	82	86.667	Mastacembelus_armatus
FBgn0035692	Sf3b6	95	77.391	ENSMZEG00005003557	sf3b6	92	77.391	Maylandia_zebra
FBgn0035692	Sf3b6	95	77.391	ENSMGAG00000014057	SF3B6	92	77.391	Meleagris_gallopavo
FBgn0035692	Sf3b6	95	77.391	ENSMAUG00000000586	-	92	77.391	Mesocricetus_auratus
FBgn0035692	Sf3b6	95	77.391	ENSMICG00000032874	SF3B6	92	77.391	Microcebus_murinus
FBgn0035692	Sf3b6	95	77.391	ENSMOCG00000014338	Sf3b6	92	77.391	Microtus_ochrogaster
FBgn0035692	Sf3b6	95	76.522	ENSMMOG00000015653	sf3b6	92	76.522	Mola_mola
FBgn0035692	Sf3b6	95	72.174	ENSMODG00000002144	SF3B6	92	72.174	Monodelphis_domestica
FBgn0035692	Sf3b6	95	76.522	ENSMALG00000019642	sf3b6	62	76.522	Monopterus_albus
FBgn0035692	Sf3b6	95	77.391	MGP_CAROLIEiJ_G0017590	Sf3b6	92	77.391	Mus_caroli
FBgn0035692	Sf3b6	95	77.391	ENSMUSG00000037361	Sf3b6	97	76.577	Mus_musculus
FBgn0035692	Sf3b6	95	77.391	MGP_PahariEiJ_G0029348	Sf3b6	92	77.391	Mus_pahari
FBgn0035692	Sf3b6	95	77.391	MGP_SPRETEiJ_G0018434	Sf3b6	92	77.391	Mus_spretus
FBgn0035692	Sf3b6	95	77.391	ENSMPUG00000013957	SF3B6	92	77.391	Mustela_putorius_furo
FBgn0035692	Sf3b6	96	76.724	ENSMLUG00000002473	SF3B6	93	76.724	Myotis_lucifugus
FBgn0035692	Sf3b6	95	77.391	ENSNGAG00000020256	Sf3b6	92	77.391	Nannospalax_galili
FBgn0035692	Sf3b6	95	77.391	ENSNBRG00000018244	sf3b6	92	77.391	Neolamprologus_brichardi
FBgn0035692	Sf3b6	95	77.391	ENSNLEG00000000815	-	92	77.391	Nomascus_leucogenys
FBgn0035692	Sf3b6	87	77.143	ENSODEG00000009547	SF3B6	88	77.143	Octodon_degus
FBgn0035692	Sf3b6	95	77.391	ENSONIG00000001219	sf3b6	92	77.391	Oreochromis_niloticus
FBgn0035692	Sf3b6	95	77.391	ENSOANG00000007627	SF3B6	92	77.391	Ornithorhynchus_anatinus
FBgn0035692	Sf3b6	95	77.391	ENSOCUG00000022008	SF3B6	92	77.391	Oryctolagus_cuniculus
FBgn0035692	Sf3b6	95	75.652	ENSORLG00000015955	sf3b6	92	75.652	Oryzias_latipes
FBgn0035692	Sf3b6	95	75.652	ENSORLG00020005875	sf3b6	92	75.652	Oryzias_latipes_hni
FBgn0035692	Sf3b6	95	75.652	ENSORLG00015001347	sf3b6	92	75.652	Oryzias_latipes_hsok
FBgn0035692	Sf3b6	95	76.522	ENSOMEG00000014506	sf3b6	92	76.522	Oryzias_melastigma
FBgn0035692	Sf3b6	95	77.391	ENSOGAG00000004468	SF3B6	92	77.391	Otolemur_garnettii
FBgn0035692	Sf3b6	95	77.391	ENSOARG00000017819	SF3B6	92	77.391	Ovis_aries
FBgn0035692	Sf3b6	95	77.391	ENSPPAG00000027816	SF3B6	92	77.391	Pan_paniscus
FBgn0035692	Sf3b6	95	77.391	ENSPPRG00000023257	SF3B6	92	77.391	Panthera_pardus
FBgn0035692	Sf3b6	95	77.391	ENSPTIG00000013322	SF3B6	92	77.391	Panthera_tigris_altaica
FBgn0035692	Sf3b6	95	77.391	ENSPTRG00000011709	SF3B6	92	77.391	Pan_troglodytes
FBgn0035692	Sf3b6	95	77.391	ENSPANG00000021963	SF3B6	92	77.391	Papio_anubis
FBgn0035692	Sf3b6	95	77.391	ENSPKIG00000012311	sf3b6	92	77.391	Paramormyrops_kingsleyae
FBgn0035692	Sf3b6	92	78.378	ENSPSIG00000017115	SF3B6	97	78.378	Pelodiscus_sinensis
FBgn0035692	Sf3b6	75	84.615	ENSPMGG00000014621	sf3b6	76	84.615	Periophthalmus_magnuspinnatus
FBgn0035692	Sf3b6	95	77.391	ENSPEMG00000010308	Sf3b6	93	77.679	Peromyscus_maniculatus_bairdii
FBgn0035692	Sf3b6	94	77.193	ENSPMAG00000006008	sf3b6	91	77.193	Petromyzon_marinus
FBgn0035692	Sf3b6	95	77.391	ENSPCIG00000022128	-	92	77.391	Phascolarctos_cinereus
FBgn0035692	Sf3b6	95	60.870	ENSPCIG00000015858	-	92	60.870	Phascolarctos_cinereus
FBgn0035692	Sf3b6	95	77.391	ENSPFOG00000012494	sf3b6	92	77.391	Poecilia_formosa
FBgn0035692	Sf3b6	95	77.391	ENSPLAG00000020460	sf3b6	92	77.391	Poecilia_latipinna
FBgn0035692	Sf3b6	95	77.391	ENSPMEG00000004426	sf3b6	92	77.391	Poecilia_mexicana
FBgn0035692	Sf3b6	95	77.391	ENSPPYG00000012603	SF3B6	92	77.391	Pongo_abelii
FBgn0035692	Sf3b6	95	77.391	ENSPVAG00000011346	SF3B6	92	77.391	Pteropus_vampyrus
FBgn0035692	Sf3b6	95	77.391	ENSPNYG00000021832	sf3b6	92	77.391	Pundamilia_nyererei
FBgn0035692	Sf3b6	95	77.391	ENSPNAG00000008845	sf3b6	83	86.667	Pygocentrus_nattereri
FBgn0035692	Sf3b6	95	63.478	ENSRNOG00000046172	Sf3b6	92	63.478	Rattus_norvegicus
FBgn0035692	Sf3b6	95	77.391	ENSRBIG00000039598	SF3B6	93	78.378	Rhinopithecus_bieti
FBgn0035692	Sf3b6	95	77.391	ENSRROG00000011368	SF3B6	92	77.391	Rhinopithecus_roxellana
FBgn0035692	Sf3b6	95	77.391	ENSSBOG00000002914	SF3B6	92	77.391	Saimiri_boliviensis_boliviensis
FBgn0035692	Sf3b6	95	77.391	ENSSFOG00015014370	sf3b6	92	77.391	Scleropages_formosus
FBgn0035692	Sf3b6	95	75.652	ENSSMAG00000004566	sf3b6	92	75.652	Scophthalmus_maximus
FBgn0035692	Sf3b6	95	77.391	ENSSDUG00000006538	sf3b6	92	77.391	Seriola_dumerili
FBgn0035692	Sf3b6	95	77.391	ENSSLDG00000004494	sf3b6	92	77.391	Seriola_lalandi_dorsalis
FBgn0035692	Sf3b6	95	77.391	ENSSARG00000011902	-	92	77.391	Sorex_araneus
FBgn0035692	Sf3b6	95	77.391	ENSSPUG00000014919	SF3B6	92	77.391	Sphenodon_punctatus
FBgn0035692	Sf3b6	95	77.391	ENSSPAG00000013201	sf3b6	92	77.391	Stegastes_partitus
FBgn0035692	Sf3b6	95	77.391	ENSSSCG00000008587	SF3B6	92	77.391	Sus_scrofa
FBgn0035692	Sf3b6	95	77.391	ENSTGUG00000013191	SF3B6	92	77.391	Taeniopygia_guttata
FBgn0035692	Sf3b6	95	77.391	ENSTRUG00000025286	sf3b6	92	77.391	Takifugu_rubripes
FBgn0035692	Sf3b6	95	77.391	ENSTNIG00000009719	sf3b6	92	77.391	Tetraodon_nigroviridis
FBgn0035692	Sf3b6	92	78.378	ENSTBEG00000012532	SF3B6	97	78.378	Tupaia_belangeri
FBgn0035692	Sf3b6	92	78.378	ENSTTRG00000013430	SF3B6	97	78.378	Tursiops_truncatus
FBgn0035692	Sf3b6	95	77.391	ENSUAMG00000025329	SF3B6	92	77.391	Ursus_americanus
FBgn0035692	Sf3b6	95	61.207	ENSUAMG00000000978	-	92	61.207	Ursus_americanus
FBgn0035692	Sf3b6	95	77.391	ENSUMAG00000022835	SF3B6	92	77.391	Ursus_maritimus
FBgn0035692	Sf3b6	92	78.378	ENSVPAG00000005546	SF3B6	97	78.378	Vicugna_pacos
FBgn0035692	Sf3b6	95	77.391	ENSVVUG00000010874	SF3B6	92	77.391	Vulpes_vulpes
FBgn0035692	Sf3b6	95	77.391	ENSXETG00000018204	sf3b6	92	77.391	Xenopus_tropicalis
FBgn0035692	Sf3b6	74	86.667	ENSXCOG00000008477	sf3b6	70	86.667	Xiphophorus_couchianus
FBgn0035692	Sf3b6	95	77.391	ENSXMAG00000010747	sf3b6	84	85.714	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0000398	mRNA splicing, via spliceosome	18981222.	IC	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003729	mRNA binding	10908586.	ISS	Function
GO:0005686	U2 snRNP	21873635.	IBA	Component
GO:0005689	U12-type spliceosomal complex	21873635.	IBA	Component
GO:0071011	precatalytic spliceosome	18981222.	HDA	Component
GO:0071013	catalytic step 2 spliceosome	18981222.	HDA	Component
GO:0071013	catalytic step 2 spliceosome	21873635.	IBA	Component