EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0035720 (Gene tree)
Gene ID: 38756
Gene Symbol: CG10077
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Minus strand
Length: 6414 bases
Position: chr3L:6949491-6955904
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0290159	ResIII	PF04851.15	4.9e-06	1	1
FBpp0076649	ResIII	PF04851.15	1.2e-05	1	1
FBpp0305296	ResIII	PF04851.15	1.2e-05	1	1
FBpp0290159	DEAD	PF00270.29	9.1e-52	1	1
FBpp0076649	DEAD	PF00270.29	2.7e-51	1	1
FBpp0305296	DEAD	PF00270.29	2.7e-51	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0300937	-	3634	-	FBpp0290159	472 (aa)	-	Q7KU78
FBtr0333083	-	3420	-	FBpp0305296	818 (aa)	-	Q8MZI3
FBtr0076940	-	3543	-	FBpp0076649	818 (aa)	-	Q8MZI3

Gene Model

Click here to download FBgn0035720's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0035720's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0035720	CG10077	70	32.424	FBgn0037573	CG7483	95	34.328
FBgn0035720	CG10077	68	32.188	FBgn0032919	CG9253	70	33.604
FBgn0035720	CG10077	66	33.871	FBgn0001942	eIF4A	88	35.813
FBgn0035720	CG10077	66	31.861	FBgn0010220	Dbp45A	70	31.332
FBgn0035720	CG10077	70	40.669	FBgn0032690	CG10333	52	41.355
FBgn0035720	CG10077	69	30.769	FBgn0036754	CG5589	61	32.249
FBgn0035720	CG10077	74	36.667	FBgn0015331	abs	69	38.051
FBgn0035720	CG10077	69	40.351	FBgn0263231	bel	52	41.487
FBgn0035720	CG10077	66	31.090	FBgn0004419	me31B	85	32.713
FBgn0035720	CG10077	64	32.099	FBgn0037561	CG9630	59	32.976
FBgn0035720	CG10077	76	44.149	FBgn0037549	CG7878	62	44.843
FBgn0035720	CG10077	74	37.845	FBgn0283442	vas	60	40.547
FBgn0035720	CG10077	77	41.622	FBgn0036104	CG6418	55	41.124
FBgn0035720	CG10077	76	70.914	FBgn0003261	Rm62	86	67.430
FBgn0035720	CG10077	65	32.258	FBgn0266581	pit	51	33.048

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0035720	CG10077	78	65.768	ENSG00000100201	DDX17	75	66.667	Homo_sapiens
FBgn0035720	CG10077	78	66.486	ENSAPOG00000017303	si:dkey-156n14.5	69	66.817	Acanthochromis_polyacanthus
FBgn0035720	CG10077	78	65.768	ENSAMEG00000010601	DDX17	64	64.731	Ailuropoda_melanoleuca
FBgn0035720	CG10077	78	66.216	ENSAOCG00000004874	si:dkey-156n14.5	68	66.591	Amphiprion_ocellaris
FBgn0035720	CG10077	78	65.946	ENSAPEG00000018317	si:dkey-156n14.5	69	66.366	Amphiprion_percula
FBgn0035720	CG10077	78	66.216	ENSATEG00000021733	si:dkey-156n14.5	71	66.817	Anabas_testudineus
FBgn0035720	CG10077	81	64.508	ENSAPLG00000014334	-	77	65.217	Anas_platyrhynchos
FBgn0035720	CG10077	71	68.750	ENSANAG00000035052	DDX17	66	68.780	Aotus_nancymaae
FBgn0035720	CG10077	82	64.341	ENSACLG00000015882	DDX17	73	65.342	Astatotilapia_calliptera
FBgn0035720	CG10077	84	64.810	ENSACLG00000015887	si:dkey-156n14.5	68	67.269	Astatotilapia_calliptera
FBgn0035720	CG10077	79	65.860	ENSBTAG00000009887	DDX17	94	64.031	Bos_taurus
FBgn0035720	CG10077	77	57.260	WBGene00010260	ddx-17	81	59.031	Caenorhabditis_elegans
FBgn0035720	CG10077	81	64.660	ENSCJAG00000011797	DDX17	90	64.660	Callithrix_jacchus
FBgn0035720	CG10077	78	65.768	ENSCAFG00000001395	DDX17	72	64.731	Canis_familiaris
FBgn0035720	CG10077	85	62.044	ENSCAFG00020002867	DDX17	94	64.031	Canis_lupus_dingo
FBgn0035720	CG10077	79	65.860	ENSCHIG00000021332	DDX17	94	64.031	Capra_hircus
FBgn0035720	CG10077	82	63.613	ENSTSYG00000001303	DDX17	96	64.341	Carlito_syrichta
FBgn0035720	CG10077	79	65.860	ENSCPOG00000011790	DDX17	94	64.031	Cavia_porcellus
FBgn0035720	CG10077	79	65.860	ENSCCAG00000024116	DDX17	94	64.433	Cebus_capucinus
FBgn0035720	CG10077	79	65.860	ENSCATG00000035701	DDX17	94	64.031	Cercocebus_atys
FBgn0035720	CG10077	79	65.860	ENSCLAG00000017294	DDX17	94	64.031	Chinchilla_lanigera
FBgn0035720	CG10077	78	65.768	ENSCSAG00000006649	DDX17	72	64.731	Chlorocebus_sabaeus
FBgn0035720	CG10077	78	65.499	ENSCHOG00000001931	DDX17	64	64.516	Choloepus_hoffmanni
FBgn0035720	CG10077	75	48.333	ENSCING00000008750	-	75	48.252	Ciona_intestinalis
FBgn0035720	CG10077	78	62.228	ENSCING00000004147	-	78	61.659	Ciona_intestinalis
FBgn0035720	CG10077	79	65.860	ENSCANG00000002348	DDX17	94	64.031	Colobus_angolensis_palliatus
FBgn0035720	CG10077	78	65.768	ENSCGRG00001023050	Ddx17	71	64.516	Cricetulus_griseus_chok1gshd
FBgn0035720	CG10077	78	65.768	ENSCGRG00000007756	Ddx17	71	64.516	Cricetulus_griseus_crigri
FBgn0035720	CG10077	79	66.667	ENSCSEG00000011351	si:dkey-156n14.5	95	64.122	Cynoglossus_semilaevis
FBgn0035720	CG10077	78	66.486	ENSCVAG00000010921	si:dkey-156n14.5	71	64.946	Cyprinodon_variegatus
FBgn0035720	CG10077	79	66.578	ENSDARG00000010873	DDX17	92	65.873	Danio_rerio
FBgn0035720	CG10077	78	65.768	ENSDNOG00000006499	DDX17	64	64.731	Dasypus_novemcinctus
FBgn0035720	CG10077	78	65.768	ENSDORG00000003358	Ddx17	71	64.731	Dipodomys_ordii
FBgn0035720	CG10077	78	65.768	ENSEASG00005018767	DDX17	72	64.731	Equus_asinus_asinus
FBgn0035720	CG10077	79	65.860	ENSECAG00000025110	DDX17	94	64.031	Equus_caballus
FBgn0035720	CG10077	79	65.860	ENSFCAG00000031570	DDX17	94	64.031	Felis_catus
FBgn0035720	CG10077	82	64.103	ENSFALG00000012560	DDX17	63	64.946	Ficedula_albicollis
FBgn0035720	CG10077	81	64.249	ENSFDAG00000009967	DDX17	72	65.000	Fukomys_damarensis
FBgn0035720	CG10077	82	64.103	ENSGALG00000037360	DDX17	71	64.946	Gallus_gallus
FBgn0035720	CG10077	84	52.618	ENSGACG00000019151	si:dkey-156n14.5	71	56.081	Gasterosteus_aculeatus
FBgn0035720	CG10077	81	64.249	ENSGGOG00000008309	DDX17	94	64.031	Gorilla_gorilla
FBgn0035720	CG10077	84	65.063	ENSHBUG00000021303	si:dkey-156n14.5	68	67.494	Haplochromis_burtoni
FBgn0035720	CG10077	82	64.341	ENSHBUG00000022268	DDX17	72	65.342	Haplochromis_burtoni
FBgn0035720	CG10077	78	65.768	ENSHGLG00000012568	DDX17	64	64.516	Heterocephalus_glaber_female
FBgn0035720	CG10077	79	65.860	ENSHGLG00100011291	DDX17	94	63.776	Heterocephalus_glaber_male
FBgn0035720	CG10077	81	66.234	ENSIPUG00000015768	si:dkey-156n14.5	96	66.234	Ictalurus_punctatus
FBgn0035720	CG10077	78	65.768	ENSSTOG00000013699	DDX17	64	64.731	Ictidomys_tridecemlineatus
FBgn0035720	CG10077	78	65.768	ENSJJAG00000011350	Ddx17	64	64.516	Jaculus_jaculus
FBgn0035720	CG10077	79	65.860	ENSMFAG00000046051	DDX17	94	64.031	Macaca_fascicularis
FBgn0035720	CG10077	79	65.860	ENSMMUG00000004304	DDX17	94	64.031	Macaca_mulatta
FBgn0035720	CG10077	79	65.860	ENSMNEG00000022218	DDX17	94	64.031	Macaca_nemestrina
FBgn0035720	CG10077	83	62.779	ENSMLEG00000029141	DDX17	93	63.496	Mandrillus_leucophaeus
FBgn0035720	CG10077	78	66.486	ENSMAMG00000008427	si:dkey-156n14.5	68	65.463	Mastacembelus_armatus
FBgn0035720	CG10077	84	64.810	ENSMZEG00005009937	si:dkey-156n14.5	68	67.269	Maylandia_zebra
FBgn0035720	CG10077	82	63.939	ENSMGAG00000012423	DDX17	86	75.281	Meleagris_gallopavo
FBgn0035720	CG10077	76	56.630	ENSMAUG00000020476	Ddx17	91	55.556	Mesocricetus_auratus
FBgn0035720	CG10077	79	65.860	ENSMICG00000011601	DDX17	94	64.031	Microcebus_murinus
FBgn0035720	CG10077	78	63.612	ENSMOCG00000010769	Ddx17	64	62.796	Microtus_ochrogaster
FBgn0035720	CG10077	82	63.660	ENSMMOG00000002806	-	93	64.304	Mola_mola
FBgn0035720	CG10077	82	62.972	ENSMMOG00000007416	si:dkey-156n14.5	92	63.038	Mola_mola
FBgn0035720	CG10077	78	65.768	ENSMODG00000009681	DDX17	75	64.731	Monodelphis_domestica
FBgn0035720	CG10077	78	66.216	ENSMALG00000002485	si:dkey-156n14.5	69	66.591	Monopterus_albus
FBgn0035720	CG10077	78	65.768	MGP_CAROLIEiJ_G0020017	Ddx17	71	64.516	Mus_caroli
FBgn0035720	CG10077	79	65.860	ENSMUSG00000055065	Ddx17	97	63.706	Mus_musculus
FBgn0035720	CG10077	78	65.768	MGP_PahariEiJ_G0020019	Ddx17	71	64.516	Mus_pahari
FBgn0035720	CG10077	78	65.768	MGP_SPRETEiJ_G0020915	Ddx17	71	64.516	Mus_spretus
FBgn0035720	CG10077	78	65.768	ENSMPUG00000013125	DDX17	72	64.731	Mustela_putorius_furo
FBgn0035720	CG10077	81	64.249	ENSMLUG00000013151	DDX17	71	65.000	Myotis_lucifugus
FBgn0035720	CG10077	78	65.768	ENSNGAG00000004001	Ddx17	71	64.516	Nannospalax_galili
FBgn0035720	CG10077	82	64.433	ENSNBRG00000002592	DDX17	87	65.092	Neolamprologus_brichardi
FBgn0035720	CG10077	84	64.899	ENSNBRG00000020059	-	92	64.541	Neolamprologus_brichardi
FBgn0035720	CG10077	82	63.683	ENSNLEG00000015117	DDX17	93	64.433	Nomascus_leucogenys
FBgn0035720	CG10077	81	64.249	ENSMEUG00000009627	DDX17	61	64.249	Notamacropus_eugenii
FBgn0035720	CG10077	78	65.768	ENSOPRG00000014734	DDX17	64	64.731	Ochotona_princeps
FBgn0035720	CG10077	78	61.867	ENSODEG00000013118	DDX17	64	61.620	Octodon_degus
FBgn0035720	CG10077	79	67.116	ENSONIG00000018880	si:dkey-156n14.5	95	64.541	Oreochromis_niloticus
FBgn0035720	CG10077	78	65.768	ENSOCUG00000004982	DDX17	72	64.731	Oryctolagus_cuniculus
FBgn0035720	CG10077	82	65.039	ENSORLG00000013685	si:dkey-156n14.5	71	65.864	Oryzias_latipes
FBgn0035720	CG10077	82	65.039	ENSORLG00020021743	si:dkey-156n14.5	71	65.864	Oryzias_latipes_hni
FBgn0035720	CG10077	82	65.039	ENSORLG00015022548	si:dkey-156n14.5	71	65.864	Oryzias_latipes_hsok
FBgn0035720	CG10077	82	65.553	ENSOMEG00000009515	si:dkey-156n14.5	71	67.269	Oryzias_melastigma
FBgn0035720	CG10077	78	65.768	ENSOGAG00000001539	DDX17	71	64.731	Otolemur_garnettii
FBgn0035720	CG10077	81	64.249	ENSOARG00000015489	DDX17	73	65.000	Ovis_aries
FBgn0035720	CG10077	81	64.249	ENSPPAG00000042301	DDX17	94	64.031	Pan_paniscus
FBgn0035720	CG10077	78	65.768	ENSPPRG00000008444	DDX17	62	64.731	Panthera_pardus
FBgn0035720	CG10077	81	64.341	ENSPTIG00000008733	DDX17	93	64.341	Panthera_tigris_altaica
FBgn0035720	CG10077	81	64.249	ENSPTRG00000014369	DDX17	94	64.031	Pan_troglodytes
FBgn0035720	CG10077	81	64.249	ENSPANG00000015143	DDX17	94	64.031	Papio_anubis
FBgn0035720	CG10077	78	67.297	ENSPKIG00000002575	si:dkey-156n14.5	65	67.269	Paramormyrops_kingsleyae
FBgn0035720	CG10077	81	64.829	ENSPKIG00000007831	DDX17	68	64.978	Paramormyrops_kingsleyae
FBgn0035720	CG10077	50	63.830	ENSPMGG00000007437	si:dkey-156n14.5	78	63.830	Periophthalmus_magnuspinnatus
FBgn0035720	CG10077	78	65.768	ENSPEMG00000021115	Ddx17	71	64.516	Peromyscus_maniculatus_bairdii
FBgn0035720	CG10077	78	65.768	ENSPCIG00000001652	DDX17	72	64.731	Phascolarctos_cinereus
FBgn0035720	CG10077	78	66.667	ENSPREG00000000506	si:dkey-156n14.5	71	65.302	Poecilia_reticulata
FBgn0035720	CG10077	78	65.768	ENSPPYG00000011821	DDX17	72	64.731	Pongo_abelii
FBgn0035720	CG10077	78	65.768	ENSPCAG00000011672	DDX17	64	64.731	Procavia_capensis
FBgn0035720	CG10077	81	64.660	ENSPCOG00000014360	DDX17	92	64.660	Propithecus_coquereli
FBgn0035720	CG10077	78	65.768	ENSPVAG00000010133	DDX17	64	64.731	Pteropus_vampyrus
FBgn0035720	CG10077	84	65.063	ENSPNYG00000005694	si:dkey-156n14.5	68	67.494	Pundamilia_nyererei
FBgn0035720	CG10077	82	64.341	ENSPNYG00000019669	-	72	65.342	Pundamilia_nyererei
FBgn0035720	CG10077	81	65.974	ENSPNAG00000029948	si:dkey-156n14.5	94	66.062	Pygocentrus_nattereri
FBgn0035720	CG10077	78	65.768	ENSRNOG00000051170	Ddx17	72	64.516	Rattus_norvegicus
FBgn0035720	CG10077	78	65.768	ENSRBIG00000031437	DDX17	95	61.480	Rhinopithecus_bieti
FBgn0035720	CG10077	79	65.860	ENSRROG00000045378	DDX17	94	64.031	Rhinopithecus_roxellana
FBgn0035720	CG10077	78	62.366	YNL112W	-	82	60.667	Saccharomyces_cerevisiae
FBgn0035720	CG10077	78	55.615	ENSSBOG00000024547	DDX17	62	56.624	Saimiri_boliviensis_boliviensis
FBgn0035720	CG10077	81	64.083	ENSSHAG00000004578	DDX17	73	64.859	Sarcophilus_harrisii
FBgn0035720	CG10077	81	64.829	ENSSFOG00015012308	ddx17	68	64.978	Scleropages_formosus
FBgn0035720	CG10077	78	66.216	ENSSMAG00000007794	si:dkey-156n14.5	68	66.140	Scophthalmus_maximus
FBgn0035720	CG10077	81	64.474	ENSSMAG00000005509	DDX17	70	64.901	Scophthalmus_maximus
FBgn0035720	CG10077	82	64.433	ENSSPAG00000019808	-	94	65.092	Stegastes_partitus
FBgn0035720	CG10077	78	65.946	ENSSPAG00000017130	si:dkey-156n14.5	69	66.366	Stegastes_partitus
FBgn0035720	CG10077	79	65.860	ENSSSCG00000000104	DDX17	94	64.031	Sus_scrofa
FBgn0035720	CG10077	82	64.103	ENSTGUG00000010391	DDX17	71	64.946	Taeniopygia_guttata
FBgn0035720	CG10077	81	64.062	ENSTRUG00000021931	si:dkey-156n14.5	71	64.901	Takifugu_rubripes
FBgn0035720	CG10077	53	61.111	ENSTNIG00000002291	-	91	62.041	Tetraodon_nigroviridis
FBgn0035720	CG10077	81	62.694	ENSTTRG00000005623	DDX17	73	63.696	Tursiops_truncatus
FBgn0035720	CG10077	83	63.131	ENSUAMG00000007290	DDX17	93	65.066	Ursus_americanus
FBgn0035720	CG10077	71	68.955	ENSVPAG00000001476	DDX17	56	68.949	Vicugna_pacos
FBgn0035720	CG10077	79	65.860	ENSVVUG00000022762	DDX17	94	64.031	Vulpes_vulpes
FBgn0035720	CG10077	78	66.216	ENSXETG00000006900	ddx17	76	64.655	Xenopus_tropicalis
FBgn0035720	CG10077	78	66.757	ENSXMAG00000005078	si:dkey-156n14.5	71	65.368	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003724	RNA helicase activity	10908586.	ISS	Function
GO:0005524	ATP binding	-	IEA	Function