EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0035838 (Gene tree)
Gene ID: 38900
Gene Symbol: ldbr
Alias: -
Full Name: lariat debranching enzyme
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 1789 bases
Position: chr3L:8121827-8123615
Accession: FBgn0035838
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0076410	DBR1	PF05011.13	5.1e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0076687	-	1734	-	FBpp0076410	534 (aa)	-	Q9VSD7

Gene Model

Click here to download FBgn0035838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0035838's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0035838	ldbr	78	50.239	ENSG00000138231	DBR1	93	68.182	Homo_sapiens
FBgn0035838	ldbr	78	54.654	ENSAPOG00000004318	dbr1	69	54.067	Acanthochromis_polyacanthus
FBgn0035838	ldbr	78	50.602	ENSAMEG00000006272	DBR1	69	50.843	Ailuropoda_melanoleuca
FBgn0035838	ldbr	78	51.790	ENSACIG00000020512	dbr1	68	51.914	Amphilophus_citrinellus
FBgn0035838	ldbr	78	54.415	ENSAOCG00000008060	dbr1	69	54.067	Amphiprion_ocellaris
FBgn0035838	ldbr	78	54.415	ENSAPEG00000021944	dbr1	69	54.067	Amphiprion_percula
FBgn0035838	ldbr	78	52.983	ENSATEG00000019673	dbr1	70	52.871	Anabas_testudineus
FBgn0035838	ldbr	100	41.421	ENSACAG00000016760	DBR1	70	48.926	Anolis_carolinensis
FBgn0035838	ldbr	78	51.196	ENSANAG00000028952	DBR1	63	68.098	Aotus_nancymaae
FBgn0035838	ldbr	84	50.000	ENSACLG00000024027	dbr1	78	49.888	Astatotilapia_calliptera
FBgn0035838	ldbr	85	50.985	ENSAMXG00000030736	dbr1	72	50.766	Astyanax_mexicanus
FBgn0035838	ldbr	78	51.185	ENSBTAG00000019949	DBR1	68	64.979	Bos_taurus
FBgn0035838	ldbr	78	42.991	WBGene00000937	dbr-1	78	42.757	Caenorhabditis_elegans
FBgn0035838	ldbr	99	42.215	ENSCJAG00000002433	DBR1	69	50.597	Callithrix_jacchus
FBgn0035838	ldbr	78	50.957	ENSCAFG00000007501	DBR1	69	51.675	Canis_familiaris
FBgn0035838	ldbr	78	50.957	ENSCAFG00020008060	DBR1	68	65.401	Canis_lupus_dingo
FBgn0035838	ldbr	78	50.948	ENSCHIG00000026937	DBR1	69	50.948	Capra_hircus
FBgn0035838	ldbr	78	49.526	ENSTSYG00000005317	DBR1	69	49.522	Carlito_syrichta
FBgn0035838	ldbr	78	46.698	ENSCPOG00000006179	DBR1	69	46.934	Cavia_porcellus
FBgn0035838	ldbr	95	45.117	ENSCCAG00000025708	DBR1	70	50.718	Cebus_capucinus
FBgn0035838	ldbr	78	50.239	ENSCATG00000032054	DBR1	69	50.478	Cercocebus_atys
FBgn0035838	ldbr	78	50.000	ENSCLAG00000001800	DBR1	69	50.478	Chinchilla_lanigera
FBgn0035838	ldbr	78	50.239	ENSCSAG00000010977	DBR1	69	50.478	Chlorocebus_sabaeus
FBgn0035838	ldbr	67	54.000	ENSCHOG00000000730	DBR1	59	54.000	Choloepus_hoffmanni
FBgn0035838	ldbr	78	50.239	ENSCPBG00000007633	DBR1	64	50.478	Chrysemys_picta_bellii
FBgn0035838	ldbr	79	49.412	ENSCING00000011388	-	89	48.941	Ciona_intestinalis
FBgn0035838	ldbr	78	49.642	ENSCSAVG00000007545	-	100	48.926	Ciona_savignyi
FBgn0035838	ldbr	99	41.552	ENSCANG00000024237	DBR1	70	50.478	Colobus_angolensis_palliatus
FBgn0035838	ldbr	78	52.133	ENSCGRG00001018497	Dbr1	69	52.133	Cricetulus_griseus_chok1gshd
FBgn0035838	ldbr	78	47.393	ENSCGRG00000005958	Dbr1	67	47.393	Cricetulus_griseus_crigri
FBgn0035838	ldbr	78	53.191	ENSCSEG00000002813	dbr1	67	53.081	Cynoglossus_semilaevis
FBgn0035838	ldbr	78	52.983	ENSCVAG00000019969	dbr1	68	52.871	Cyprinodon_variegatus
FBgn0035838	ldbr	78	51.914	ENSDARG00000056923	dbr1	72	49.330	Danio_rerio
FBgn0035838	ldbr	78	51.074	ENSDNOG00000043630	DBR1	69	50.835	Dasypus_novemcinctus
FBgn0035838	ldbr	78	48.449	ENSEBUG00000007494	dbr1	67	48.449	Eptatretus_burgeri
FBgn0035838	ldbr	78	52.133	ENSEASG00005003788	DBR1	69	51.896	Equus_asinus_asinus
FBgn0035838	ldbr	78	52.370	ENSECAG00000013920	DBR1	69	52.133	Equus_caballus
FBgn0035838	ldbr	78	40.431	ENSEEUG00000007059	DBR1	69	40.670	Erinaceus_europaeus
FBgn0035838	ldbr	78	53.699	ENSELUG00000005587	dbr1	73	51.345	Esox_lucius
FBgn0035838	ldbr	78	50.718	ENSFCAG00000002229	DBR1	69	50.957	Felis_catus
FBgn0035838	ldbr	100	42.783	ENSFALG00000013467	DBR1	60	50.957	Ficedula_albicollis
FBgn0035838	ldbr	78	51.422	ENSFDAG00000009524	DBR1	70	51.659	Fukomys_damarensis
FBgn0035838	ldbr	78	52.267	ENSFHEG00000001743	dbr1	68	51.675	Fundulus_heteroclitus
FBgn0035838	ldbr	78	53.333	ENSGMOG00000006925	dbr1	68	53.333	Gadus_morhua
FBgn0035838	ldbr	66	49.716	ENSGALG00000043797	DBR1	64	49.716	Gallus_gallus
FBgn0035838	ldbr	79	51.887	ENSGAFG00000001046	dbr1	71	51.773	Gambusia_affinis
FBgn0035838	ldbr	81	52.436	ENSGACG00000009122	dbr1	71	51.972	Gasterosteus_aculeatus
FBgn0035838	ldbr	78	50.239	ENSGAGG00000001244	DBR1	71	50.478	Gopherus_agassizii
FBgn0035838	ldbr	78	44.976	ENSGGOG00000004564	DBR1	68	45.215	Gorilla_gorilla
FBgn0035838	ldbr	84	50.223	ENSHBUG00000000882	dbr1	73	49.441	Haplochromis_burtoni
FBgn0035838	ldbr	96	46.272	ENSHGLG00000014529	Dbr1	70	51.659	Heterocephalus_glaber_female
FBgn0035838	ldbr	96	46.272	ENSHGLG00100013202	Dbr1	70	51.659	Heterocephalus_glaber_male
FBgn0035838	ldbr	78	54.177	ENSHCOG00000004179	dbr1	70	53.828	Hippocampus_comes
FBgn0035838	ldbr	79	52.246	ENSIPUG00000023749	dbr1	73	49.571	Ictalurus_punctatus
FBgn0035838	ldbr	78	50.708	ENSSTOG00000007122	DBR1	69	50.236	Ictidomys_tridecemlineatus
FBgn0035838	ldbr	78	50.236	ENSJJAG00000017080	Dbr1	69	50.708	Jaculus_jaculus
FBgn0035838	ldbr	78	51.675	ENSKMAG00000004869	dbr1	69	51.914	Kryptolebias_marmoratus
FBgn0035838	ldbr	79	53.066	ENSLBEG00000021307	dbr1	73	50.993	Labrus_bergylta
FBgn0035838	ldbr	100	42.388	ENSLACG00000005547	DBR1	71	51.294	Latimeria_chalumnae
FBgn0035838	ldbr	78	52.594	ENSLOCG00000004160	dbr1	67	52.482	Lepisosteus_oculatus
FBgn0035838	ldbr	100	41.596	ENSLAFG00000005827	DBR1	70	50.711	Loxodonta_africana
FBgn0035838	ldbr	78	50.239	ENSMFAG00000043642	DBR1	69	50.478	Macaca_fascicularis
FBgn0035838	ldbr	78	50.239	ENSMMUG00000021284	DBR1	69	50.478	Macaca_mulatta
FBgn0035838	ldbr	78	50.239	ENSMNEG00000041740	DBR1	69	50.478	Macaca_nemestrina
FBgn0035838	ldbr	78	51.905	ENSMAMG00000012205	dbr1	65	66.667	Mastacembelus_armatus
FBgn0035838	ldbr	84	50.000	ENSMZEG00005021338	dbr1	73	49.888	Maylandia_zebra
FBgn0035838	ldbr	58	44.373	ENSMGAG00000002142	DBR1	63	44.373	Meleagris_gallopavo
FBgn0035838	ldbr	100	42.882	ENSMAUG00000010037	Dbr1	70	51.896	Mesocricetus_auratus
FBgn0035838	ldbr	78	51.422	ENSMICG00000049533	DBR1	69	51.659	Microcebus_murinus
FBgn0035838	ldbr	78	51.185	ENSMOCG00000018746	Dbr1	71	51.185	Microtus_ochrogaster
FBgn0035838	ldbr	78	52.506	ENSMMOG00000000719	dbr1	67	52.506	Mola_mola
FBgn0035838	ldbr	100	42.169	ENSMODG00000018554	DBR1	69	50.957	Monodelphis_domestica
FBgn0035838	ldbr	78	51.675	ENSMALG00000022283	dbr1	70	48.571	Monopterus_albus
FBgn0035838	ldbr	78	51.313	MGP_CAROLIEiJ_G0032564	Dbr1	97	67.066	Mus_caroli
FBgn0035838	ldbr	78	51.313	ENSMUSG00000032469	Dbr1	97	67.066	Mus_musculus
FBgn0035838	ldbr	78	51.659	MGP_PahariEiJ_G0015433	Dbr1	97	67.066	Mus_pahari
FBgn0035838	ldbr	78	51.313	MGP_SPRETEiJ_G0033708	Dbr1	97	67.066	Mus_spretus
FBgn0035838	ldbr	78	50.474	ENSMPUG00000009230	DBR1	69	50.711	Mustela_putorius_furo
FBgn0035838	ldbr	78	51.896	ENSMLUG00000026117	DBR1	69	51.422	Myotis_lucifugus
FBgn0035838	ldbr	100	43.493	ENSNGAG00000003518	Dbr1	74	50.333	Nannospalax_galili
FBgn0035838	ldbr	78	52.267	ENSNBRG00000016318	dbr1	68	51.435	Neolamprologus_brichardi
FBgn0035838	ldbr	78	50.239	ENSNLEG00000032263	DBR1	68	50.478	Nomascus_leucogenys
FBgn0035838	ldbr	100	41.509	ENSMEUG00000009188	DBR1	70	49.522	Notamacropus_eugenii
FBgn0035838	ldbr	93	38.532	ENSOPRG00000016510	DBR1	68	44.503	Ochotona_princeps
FBgn0035838	ldbr	100	43.080	ENSODEG00000018178	DBR1	70	51.196	Octodon_degus
FBgn0035838	ldbr	78	52.267	ENSONIG00000013801	dbr1	67	51.675	Oreochromis_niloticus
FBgn0035838	ldbr	72	47.396	ENSOANG00000007783	DBR1	70	47.135	Ornithorhynchus_anatinus
FBgn0035838	ldbr	72	52.835	ENSOCUG00000015129	DBR1	61	53.093	Oryctolagus_cuniculus
FBgn0035838	ldbr	78	53.349	ENSORLG00015001112	dbr1	75	52.055	Oryzias_latipes_hsok
FBgn0035838	ldbr	100	43.881	ENSOMEG00000000857	dbr1	72	51.914	Oryzias_melastigma
FBgn0035838	ldbr	78	51.435	ENSOGAG00000033095	DBR1	69	51.675	Otolemur_garnettii
FBgn0035838	ldbr	78	50.118	ENSOARG00000007589	DBR1	69	49.761	Ovis_aries
FBgn0035838	ldbr	78	50.239	ENSPPAG00000031137	DBR1	69	50.478	Pan_paniscus
FBgn0035838	ldbr	78	50.718	ENSPPRG00000013629	DBR1	69	50.957	Panthera_pardus
FBgn0035838	ldbr	76	50.000	ENSPTIG00000012674	DBR1	67	50.246	Panthera_tigris_altaica
FBgn0035838	ldbr	78	50.000	ENSPTRG00000015441	DBR1	69	50.239	Pan_troglodytes
FBgn0035838	ldbr	78	50.239	ENSPANG00000012664	DBR1	69	50.478	Papio_anubis
FBgn0035838	ldbr	78	51.435	ENSPKIG00000000310	dbr1	66	51.435	Paramormyrops_kingsleyae
FBgn0035838	ldbr	88	40.748	ENSPSIG00000015486	DBR1	66	49.859	Pelodiscus_sinensis
FBgn0035838	ldbr	78	52.133	ENSPEMG00000020602	Dbr1	69	52.133	Peromyscus_maniculatus_bairdii
FBgn0035838	ldbr	78	50.597	ENSPMAG00000008620	dbr1	99	50.597	Petromyzon_marinus
FBgn0035838	ldbr	78	50.718	ENSPCIG00000006494	DBR1	69	50.239	Phascolarctos_cinereus
FBgn0035838	ldbr	79	52.830	ENSPLAG00000011665	dbr1	71	52.246	Poecilia_latipinna
FBgn0035838	ldbr	79	52.594	ENSPMEG00000010080	dbr1	71	52.009	Poecilia_mexicana
FBgn0035838	ldbr	82	50.787	ENSPREG00000020157	dbr1	75	50.676	Poecilia_reticulata
FBgn0035838	ldbr	99	41.652	ENSPPYG00000014139	DBR1	69	50.478	Pongo_abelii
FBgn0035838	ldbr	78	50.597	ENSPCAG00000012956	DBR1	97	50.119	Procavia_capensis
FBgn0035838	ldbr	78	51.422	ENSPCOG00000016894	DBR1	69	51.659	Propithecus_coquereli
FBgn0035838	ldbr	78	40.802	ENSPVAG00000007713	DBR1	69	41.038	Pteropus_vampyrus
FBgn0035838	ldbr	84	50.223	ENSPNYG00000015453	dbr1	73	49.441	Pundamilia_nyererei
FBgn0035838	ldbr	80	51.288	ENSPNAG00000025595	dbr1	74	49.138	Pygocentrus_nattereri
FBgn0035838	ldbr	100	42.808	ENSRNOG00000014588	Dbr1	69	50.948	Rattus_norvegicus
FBgn0035838	ldbr	78	50.237	ENSRBIG00000045002	DBR1	69	50.474	Rhinopithecus_bieti
FBgn0035838	ldbr	78	50.237	ENSRROG00000044819	DBR1	69	50.474	Rhinopithecus_roxellana
FBgn0035838	ldbr	62	38.592	YKL149C	DBR1	86	38.028	Saccharomyces_cerevisiae
FBgn0035838	ldbr	99	41.638	ENSSBOG00000032048	DBR1	69	50.478	Saimiri_boliviensis_boliviensis
FBgn0035838	ldbr	100	41.581	ENSSHAG00000006752	DBR1	69	50.000	Sarcophilus_harrisii
FBgn0035838	ldbr	78	52.029	ENSSFOG00015011410	dbr1	77	49.889	Scleropages_formosus
FBgn0035838	ldbr	80	52.804	ENSSMAG00000016078	dbr1	70	52.336	Scophthalmus_maximus
FBgn0035838	ldbr	78	52.267	ENSSDUG00000017849	dbr1	66	52.153	Seriola_dumerili
FBgn0035838	ldbr	78	52.029	ENSSLDG00000019891	dbr1	67	51.914	Seriola_lalandi_dorsalis
FBgn0035838	ldbr	96	44.186	ENSSARG00000009558	-	71	48.325	Sorex_araneus
FBgn0035838	ldbr	89	40.076	ENSSPUG00000004724	DBR1	61	48.611	Sphenodon_punctatus
FBgn0035838	ldbr	100	44.407	ENSSPAG00000016892	dbr1	68	52.871	Stegastes_partitus
FBgn0035838	ldbr	100	42.609	ENSSSCG00000031098	DBR1	70	51.675	Sus_scrofa
FBgn0035838	ldbr	93	41.450	ENSTGUG00000007073	DBR1	73	47.393	Taeniopygia_guttata
FBgn0035838	ldbr	79	52.494	ENSTRUG00000021594	dbr1	67	52.494	Takifugu_rubripes
FBgn0035838	ldbr	79	52.844	ENSTNIG00000006710	dbr1	75	49.781	Tetraodon_nigroviridis
FBgn0035838	ldbr	78	51.185	ENSTTRG00000004020	DBR1	69	50.957	Tursiops_truncatus
FBgn0035838	ldbr	78	50.835	ENSUAMG00000004639	DBR1	69	51.074	Ursus_americanus
FBgn0035838	ldbr	78	50.718	ENSUMAG00000015012	DBR1	69	50.957	Ursus_maritimus
FBgn0035838	ldbr	78	46.411	ENSVPAG00000011711	DBR1	69	45.933	Vicugna_pacos
FBgn0035838	ldbr	78	50.718	ENSVVUG00000026604	DBR1	69	51.435	Vulpes_vulpes
FBgn0035838	ldbr	100	42.808	ENSXETG00000027491	dbr1	71	51.551	Xenopus_tropicalis
FBgn0035838	ldbr	79	52.358	ENSXCOG00000018078	dbr1	76	50.000	Xiphophorus_couchianus
FBgn0035838	ldbr	79	52.358	ENSXMAG00000007311	dbr1	76	50.000	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000375	RNA splicing, via transesterification reactions	-	ISS	Process
GO:0000398	mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISS	Component
GO:0006396	RNA processing	10908584.	ISS	Process
GO:0008419	RNA lariat debranching enzyme activity	21873635.	IBA	Function
GO:0008419	RNA lariat debranching enzyme activity	10908584.	ISS	Function