EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0035901 (Gene tree)
Gene ID: 38969
Gene Symbol: CG6745
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 3005 bases
Position: chr3L:8510003-8513007
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0076346	TruD	PF01142.18	7.6e-72	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0076620	-	2770	-	FBpp0076346	734 (aa)	-	Q9VSK9

Gene Model

Click here to download FBgn0035901's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0035901's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0035901	CG6745	88	34.776	ENSG00000091127	PUS7	84	33.942	Homo_sapiens
FBgn0035901	CG6745	88	37.713	ENSAPOG00000008645	pus7	89	37.442	Acanthochromis_polyacanthus
FBgn0035901	CG6745	88	35.494	ENSAMEG00000013229	PUS7	82	34.716	Ailuropoda_melanoleuca
FBgn0035901	CG6745	88	36.476	ENSACIG00000019006	pus7	88	36.476	Amphilophus_citrinellus
FBgn0035901	CG6745	88	37.481	ENSAOCG00000013110	pus7	89	37.825	Amphiprion_ocellaris
FBgn0035901	CG6745	88	37.403	ENSAPEG00000007260	pus7	89	37.750	Amphiprion_percula
FBgn0035901	CG6745	88	37.099	ENSATEG00000019185	pus7	88	37.099	Anabas_testudineus
FBgn0035901	CG6745	60	30.958	ENSAPLG00000012601	PUS7L	93	30.958	Anas_platyrhynchos
FBgn0035901	CG6745	88	35.231	ENSAPLG00000005024	PUS7	85	35.258	Anas_platyrhynchos
FBgn0035901	CG6745	88	34.916	ENSACAG00000014447	PUS7	86	34.947	Anolis_carolinensis
FBgn0035901	CG6745	88	35.231	ENSANAG00000035204	PUS7	84	34.769	Aotus_nancymaae
FBgn0035901	CG6745	88	37.403	ENSACLG00000026503	pus7	89	37.558	Astatotilapia_calliptera
FBgn0035901	CG6745	88	35.648	ENSAMXG00000014361	pus7	88	35.648	Astyanax_mexicanus
FBgn0035901	CG6745	60	30.599	ENSBTAG00000004718	PUS7L	57	30.599	Bos_taurus
FBgn0035901	CG6745	88	35.394	ENSBTAG00000007743	PUS7	84	35.538	Bos_taurus
FBgn0035901	CG6745	88	35.240	ENSCJAG00000016081	PUS7	84	35.077	Callithrix_jacchus
FBgn0035901	CG6745	88	35.240	ENSCAFG00000004035	PUS7	73	35.240	Canis_familiaris
FBgn0035901	CG6745	88	35.394	ENSCHIG00000021531	PUS7	84	35.538	Capra_hircus
FBgn0035901	CG6745	60	30.377	ENSCHIG00000011359	PUS7L	57	30.377	Capra_hircus
FBgn0035901	CG6745	87	35.194	ENSTSYG00000007882	PUS7	84	35.375	Carlito_syrichta
FBgn0035901	CG6745	73	33.333	ENSCAPG00000012674	PUS7	77	34.146	Cavia_aperea
FBgn0035901	CG6745	87	34.520	ENSCPOG00000004705	PUS7	84	34.769	Cavia_porcellus
FBgn0035901	CG6745	88	33.128	ENSCCAG00000031558	PUS7	83	32.669	Cebus_capucinus
FBgn0035901	CG6745	88	34.930	ENSCATG00000044868	PUS7	78	35.085	Cercocebus_atys
FBgn0035901	CG6745	87	34.830	ENSCLAG00000005275	PUS7	85	34.923	Chinchilla_lanigera
FBgn0035901	CG6745	60	30.088	ENSCLAG00000002416	PUS7L	57	30.088	Chinchilla_lanigera
FBgn0035901	CG6745	88	35.085	ENSCSAG00000011530	PUS7	82	35.240	Chlorocebus_sabaeus
FBgn0035901	CG6745	65	36.508	ENSCHOG00000011068	PUS7	62	36.508	Choloepus_hoffmanni
FBgn0035901	CG6745	60	30.752	ENSCHOG00000000787	PUS7L	92	30.752	Choloepus_hoffmanni
FBgn0035901	CG6745	89	35.061	ENSCPBG00000001198	PUS7	79	34.756	Chrysemys_picta_bellii
FBgn0035901	CG6745	60	30.786	ENSCPBG00000015394	PUS7L	58	30.786	Chrysemys_picta_bellii
FBgn0035901	CG6745	87	31.839	ENSCING00000008194	-	93	31.839	Ciona_intestinalis
FBgn0035901	CG6745	87	32.353	ENSCSAVG00000010678	-	99	32.353	Ciona_savignyi
FBgn0035901	CG6745	60	30.088	ENSCANG00000036667	PUS7L	64	30.088	Colobus_angolensis_palliatus
FBgn0035901	CG6745	88	35.085	ENSCANG00000041689	PUS7	84	35.231	Colobus_angolensis_palliatus
FBgn0035901	CG6745	88	35.549	ENSCGRG00001011955	Pus7	84	35.538	Cricetulus_griseus_chok1gshd
FBgn0035901	CG6745	88	35.549	ENSCGRG00000000387	Pus7	84	35.538	Cricetulus_griseus_crigri
FBgn0035901	CG6745	88	36.420	ENSCSEG00000009505	pus7	89	36.420	Cynoglossus_semilaevis
FBgn0035901	CG6745	88	36.321	ENSCVAG00000007338	pus7	88	36.321	Cyprinodon_variegatus
FBgn0035901	CG6745	88	35.439	ENSDARG00000031774	pus7	90	34.763	Danio_rerio
FBgn0035901	CG6745	88	35.394	ENSDNOG00000007868	PUS7	84	35.846	Dasypus_novemcinctus
FBgn0035901	CG6745	63	30.021	ENSDORG00000015109	Pus7l	60	30.021	Dipodomys_ordii
FBgn0035901	CG6745	88	34.923	ENSDORG00000014545	Pus7	84	35.077	Dipodomys_ordii
FBgn0035901	CG6745	88	33.898	ENSETEG00000009791	PUS7	84	33.538	Echinops_telfairi
FBgn0035901	CG6745	88	34.431	ENSEBUG00000006182	pus7	75	34.431	Eptatretus_burgeri
FBgn0035901	CG6745	88	36.196	ENSEASG00005017408	PUS7	84	36.154	Equus_asinus_asinus
FBgn0035901	CG6745	88	36.196	ENSECAG00000011144	PUS7	84	36.154	Equus_caballus
FBgn0035901	CG6745	56	49.123	ENSEEUG00000014173	PUS7	62	49.123	Erinaceus_europaeus
FBgn0035901	CG6745	76	45.217	ENSELUG00000008521	pus7	83	45.217	Esox_lucius
FBgn0035901	CG6745	87	35.459	ENSFCAG00000019145	PUS7	84	35.077	Felis_catus
FBgn0035901	CG6745	89	35.061	ENSFALG00000010323	PUS7	87	35.061	Ficedula_albicollis
FBgn0035901	CG6745	60	30.820	ENSFALG00000010205	PUS7L	99	30.820	Ficedula_albicollis
FBgn0035901	CG6745	87	35.449	ENSFDAG00000016064	PUS7	85	35.538	Fukomys_damarensis
FBgn0035901	CG6745	89	37.043	ENSFHEG00000018282	pus7	93	35.088	Fundulus_heteroclitus
FBgn0035901	CG6745	88	36.474	ENSGMOG00000004874	pus7	96	36.309	Gadus_morhua
FBgn0035901	CG6745	88	34.923	ENSGALG00000008132	PUS7	86	34.954	Gallus_gallus
FBgn0035901	CG6745	60	30.088	ENSGALG00000009577	PUS7L	60	30.088	Gallus_gallus
FBgn0035901	CG6745	88	36.167	ENSGAFG00000002980	pus7	92	35.312	Gambusia_affinis
FBgn0035901	CG6745	88	36.980	ENSGACG00000003840	pus7	96	36.963	Gasterosteus_aculeatus
FBgn0035901	CG6745	90	35.135	ENSGAGG00000006756	PUS7	87	34.809	Gopherus_agassizii
FBgn0035901	CG6745	88	34.776	ENSGGOG00000011898	PUS7	84	33.942	Gorilla_gorilla
FBgn0035901	CG6745	88	37.403	ENSHBUG00000015448	pus7	89	37.558	Haplochromis_burtoni
FBgn0035901	CG6745	87	35.449	ENSHGLG00000015697	PUS7	85	35.538	Heterocephalus_glaber_female
FBgn0035901	CG6745	87	35.449	ENSHGLG00100011745	PUS7	85	35.538	Heterocephalus_glaber_male
FBgn0035901	CG6745	88	34.933	ENSHCOG00000005361	pus7	90	34.712	Hippocampus_comes
FBgn0035901	CG6745	88	35.185	ENSIPUG00000015465	pus7	85	35.185	Ictalurus_punctatus
FBgn0035901	CG6745	87	35.340	ENSSTOG00000004974	PUS7	84	35.231	Ictidomys_tridecemlineatus
FBgn0035901	CG6745	51	34.701	ENSJJAG00000002299	Pus7l	53	34.701	Jaculus_jaculus
FBgn0035901	CG6745	88	32.975	ENSJJAG00000019164	Pus7	83	33.077	Jaculus_jaculus
FBgn0035901	CG6745	88	36.785	ENSKMAG00000013311	pus7	89	36.785	Kryptolebias_marmoratus
FBgn0035901	CG6745	88	36.794	ENSLBEG00000011849	pus7	83	36.794	Labrus_bergylta
FBgn0035901	CG6745	88	34.515	ENSLACG00000001737	PUS7	83	34.515	Latimeria_chalumnae
FBgn0035901	CG6745	74	33.151	ENSLOCG00000015489	pus7	95	33.151	Lepisosteus_oculatus
FBgn0035901	CG6745	92	34.808	ENSLAFG00000017478	PUS7	89	35.103	Loxodonta_africana
FBgn0035901	CG6745	88	34.930	ENSMFAG00000046201	PUS7	78	35.085	Macaca_fascicularis
FBgn0035901	CG6745	88	35.077	ENSMMUG00000017575	PUS7	78	35.231	Macaca_mulatta
FBgn0035901	CG6745	88	35.077	ENSMNEG00000041563	PUS7	84	34.094	Macaca_nemestrina
FBgn0035901	CG6745	88	34.930	ENSMLEG00000001039	PUS7	84	35.077	Mandrillus_leucophaeus
FBgn0035901	CG6745	88	36.963	ENSMAMG00000023153	pus7	89	36.963	Mastacembelus_armatus
FBgn0035901	CG6745	88	37.094	ENSMZEG00005009209	pus7	89	37.249	Maylandia_zebra
FBgn0035901	CG6745	88	34.769	ENSMGAG00000006721	PUS7	85	34.604	Meleagris_gallopavo
FBgn0035901	CG6745	88	35.385	ENSMAUG00000008206	Pus7	84	35.538	Mesocricetus_auratus
FBgn0035901	CG6745	60	30.310	ENSMICG00000043043	PUS7L	57	30.310	Microcebus_murinus
FBgn0035901	CG6745	88	35.890	ENSMICG00000010938	PUS7	84	35.846	Microcebus_murinus
FBgn0035901	CG6745	88	34.923	ENSMOCG00000019335	Pus7	84	34.094	Microtus_ochrogaster
FBgn0035901	CG6745	88	37.249	ENSMMOG00000000935	pus7	87	37.249	Mola_mola
FBgn0035901	CG6745	88	37.481	ENSMALG00000013492	pus7	89	37.481	Monopterus_albus
FBgn0035901	CG6745	88	35.077	MGP_CAROLIEiJ_G0026999	Pus7	96	41.899	Mus_caroli
FBgn0035901	CG6745	88	35.231	ENSMUSG00000057541	Pus7	96	41.899	Mus_musculus
FBgn0035901	CG6745	88	35.538	MGP_PahariEiJ_G0021771	Pus7	96	43.017	Mus_pahari
FBgn0035901	CG6745	88	35.077	MGP_SPRETEiJ_G0027995	Pus7	96	41.899	Mus_spretus
FBgn0035901	CG6745	84	35.122	ENSMPUG00000018259	PUS7	99	34.846	Mustela_putorius_furo
FBgn0035901	CG6745	88	35.240	ENSMLUG00000004941	PUS7	88	34.795	Myotis_lucifugus
FBgn0035901	CG6745	88	36.210	ENSNGAG00000023354	Pus7	85	36.167	Nannospalax_galili
FBgn0035901	CG6745	88	37.249	ENSNBRG00000019065	pus7	89	37.249	Neolamprologus_brichardi
FBgn0035901	CG6745	88	34.930	ENSNLEG00000008956	PUS7	84	34.094	Nomascus_leucogenys
FBgn0035901	CG6745	87	35.494	ENSODEG00000001435	PUS7	84	35.385	Octodon_degus
FBgn0035901	CG6745	88	36.631	ENSONIG00000008804	pus7	89	36.785	Oreochromis_niloticus
FBgn0035901	CG6745	88	35.846	ENSOANG00000003163	PUS7	83	35.538	Ornithorhynchus_anatinus
FBgn0035901	CG6745	88	35.747	ENSOCUG00000029160	PUS7	78	34.862	Oryctolagus_cuniculus
FBgn0035901	CG6745	88	35.858	ENSORLG00000002656	pus7	80	35.858	Oryzias_latipes
FBgn0035901	CG6745	88	35.703	ENSORLG00020019416	pus7	83	35.858	Oryzias_latipes_hni
FBgn0035901	CG6745	88	35.858	ENSORLG00015012352	pus7	88	35.858	Oryzias_latipes_hsok
FBgn0035901	CG6745	88	36.476	ENSOMEG00000008389	pus7	88	35.858	Oryzias_melastigma
FBgn0035901	CG6745	60	30.310	ENSOGAG00000028696	PUS7L	57	30.310	Otolemur_garnettii
FBgn0035901	CG6745	60	30.377	ENSOARG00000019691	PUS7L	57	30.377	Ovis_aries
FBgn0035901	CG6745	88	35.385	ENSOARG00000003160	PUS7	78	35.583	Ovis_aries
FBgn0035901	CG6745	88	34.776	ENSPPAG00000043532	PUS7	84	33.942	Pan_paniscus
FBgn0035901	CG6745	87	35.459	ENSPPRG00000021307	PUS7	84	35.077	Panthera_pardus
FBgn0035901	CG6745	87	35.303	ENSPTIG00000018973	PUS7	84	34.923	Panthera_tigris_altaica
FBgn0035901	CG6745	88	34.923	ENSPTRG00000043961	-	84	34.094	Pan_troglodytes
FBgn0035901	CG6745	88	34.776	ENSPTRG00000019565	PUS7	84	33.942	Pan_troglodytes
FBgn0035901	CG6745	88	31.839	ENSPANG00000014230	PUS7	83	31.846	Papio_anubis
FBgn0035901	CG6745	88	34.930	ENSPKIG00000007013	pus7	88	34.763	Paramormyrops_kingsleyae
FBgn0035901	CG6745	89	35.106	ENSPSIG00000004034	PUS7	87	35.106	Pelodiscus_sinensis
FBgn0035901	CG6745	60	30.531	ENSPSIG00000013905	PUS7L	69	30.088	Pelodiscus_sinensis
FBgn0035901	CG6745	88	36.585	ENSPMGG00000018583	pus7	88	36.585	Periophthalmus_magnuspinnatus
FBgn0035901	CG6745	70	52.632	ENSPEMG00000022616	Pus7	76	52.632	Peromyscus_maniculatus_bairdii
FBgn0035901	CG6745	88	35.692	ENSPCIG00000013543	PUS7	63	43.750	Phascolarctos_cinereus
FBgn0035901	CG6745	88	36.866	ENSPLAG00000015182	pus7	88	36.866	Poecilia_latipinna
FBgn0035901	CG6745	88	36.940	ENSPMEG00000006466	pus7	95	35.601	Poecilia_mexicana
FBgn0035901	CG6745	88	37.037	ENSPREG00000019080	pus7	95	35.745	Poecilia_reticulata
FBgn0035901	CG6745	78	43.243	ENSPPYG00000017891	PUS7	83	43.243	Pongo_abelii
FBgn0035901	CG6745	58	43.382	ENSPCAG00000004241	PUS7	58	43.382	Procavia_capensis
FBgn0035901	CG6745	60	30.088	ENSPCOG00000025211	PUS7L	57	30.088	Propithecus_coquereli
FBgn0035901	CG6745	88	36.196	ENSPCOG00000027014	PUS7	84	36.154	Propithecus_coquereli
FBgn0035901	CG6745	88	34.361	ENSPVAG00000003679	PUS7	84	34.308	Pteropus_vampyrus
FBgn0035901	CG6745	88	37.094	ENSPNYG00000006752	pus7	89	37.249	Pundamilia_nyererei
FBgn0035901	CG6745	88	36.210	ENSPNAG00000010812	pus7	80	36.210	Pygocentrus_nattereri
FBgn0035901	CG6745	88	35.285	ENSRNOG00000010572	Pus7	84	35.231	Rattus_norvegicus
FBgn0035901	CG6745	73	39.535	ENSRBIG00000012520	PUS7	73	39.535	Rhinopithecus_bieti
FBgn0035901	CG6745	88	34.930	ENSRROG00000042960	PUS7	84	35.077	Rhinopithecus_roxellana
FBgn0035901	CG6745	87	31.618	YOR243C	-	93	31.618	Saccharomyces_cerevisiae
FBgn0035901	CG6745	88	35.240	ENSSBOG00000030836	PUS7	84	34.769	Saimiri_boliviensis_boliviensis
FBgn0035901	CG6745	88	35.394	ENSSHAG00000008584	PUS7	84	36.012	Sarcophilus_harrisii
FBgn0035901	CG6745	88	34.342	ENSSFOG00015002315	pus7	88	34.299	Scleropages_formosus
FBgn0035901	CG6745	88	36.447	ENSSMAG00000007173	pus7	89	36.600	Scophthalmus_maximus
FBgn0035901	CG6745	88	37.174	ENSSDUG00000023238	pus7	89	35.549	Seriola_dumerili
FBgn0035901	CG6745	88	37.174	ENSSLDG00000023664	pus7	89	37.174	Seriola_lalandi_dorsalis
FBgn0035901	CG6745	70	44.776	ENSSARG00000013253	PUS7	72	44.776	Sorex_araneus
FBgn0035901	CG6745	89	34.909	ENSSPUG00000018496	PUS7	86	34.604	Sphenodon_punctatus
FBgn0035901	CG6745	88	37.249	ENSSPAG00000022258	pus7	89	37.596	Stegastes_partitus
FBgn0035901	CG6745	60	30.973	ENSSSCG00000000800	PUS7L	57	30.973	Sus_scrofa
FBgn0035901	CG6745	88	35.385	ENSSSCG00000015428	PUS7	80	35.538	Sus_scrofa
FBgn0035901	CG6745	60	30.088	ENSTGUG00000005924	PUS7L	69	30.088	Taeniopygia_guttata
FBgn0035901	CG6745	89	34.909	ENSTGUG00000002961	PUS7	96	35.106	Taeniopygia_guttata
FBgn0035901	CG6745	88	35.890	ENSTRUG00000016532	pus7	85	35.890	Takifugu_rubripes
FBgn0035901	CG6745	89	36.585	ENSTNIG00000015967	pus7	95	36.501	Tetraodon_nigroviridis
FBgn0035901	CG6745	71	32.218	ENSTBEG00000004158	-	65	32.780	Tupaia_belangeri
FBgn0035901	CG6745	88	35.703	ENSTTRG00000001476	PUS7	84	35.692	Tursiops_truncatus
FBgn0035901	CG6745	88	35.231	ENSUMAG00000018369	PUS7	91	34.515	Ursus_maritimus
FBgn0035901	CG6745	88	32.457	ENSVPAG00000008585	PUS7	84	32.612	Vicugna_pacos
FBgn0035901	CG6745	88	35.538	ENSVVUG00000014455	PUS7	84	35.538	Vulpes_vulpes
FBgn0035901	CG6745	50	30.026	ENSVVUG00000016965	PUS7L	51	30.026	Vulpes_vulpes
FBgn0035901	CG6745	88	36.574	ENSXETG00000023207	pus7	85	36.574	Xenopus_tropicalis
FBgn0035901	CG6745	88	36.728	ENSXCOG00000020897	pus7	97	34.979	Xiphophorus_couchianus
FBgn0035901	CG6745	88	36.574	ENSXMAG00000012668	pus7	92	34.936	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001522	pseudouridine synthesis	-	IEA	Process
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0009982	pseudouridine synthase activity	21873635.	IBA	Function