EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Gene Ontology

Description

Ensembl ID: FBgn0035942 (Gene tree)
Gene ID: 39023
Gene Symbol: ValRS-m
Alias: -
Full Name: Valyl-tRNA synthetase%2C mitochondrial
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 3496 bases
Position: chr3L:8961274-8964769
Accession: FBgn0035942
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0076287	tRNA-synt_1g	PF09334.11	6.5e-14	1	1
FBpp0312160	tRNA-synt_1g	PF09334.11	6.5e-14	1	1
FBpp0076287	Anticodon_1	PF08264.13	1.8e-25	1	1
FBpp0312160	Anticodon_1	PF08264.13	1.8e-25	1	1
FBpp0076287	tRNA-synt_1	PF00133.22	1e-173	1	1
FBpp0312160	tRNA-synt_1	PF00133.22	1e-173	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0346542	-	3254	-	FBpp0312160	994 (aa)	-	Q9VSR7
FBtr0076560	-	3148	-	FBpp0076287	994 (aa)	-	Q9VSR7

Gene Model

Click here to download FBgn0035942's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0035942's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0035942	ValRS-m	96	38.501	FBgn0027079	ValRS	83	40.382

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0002161	aminoacyl-tRNA editing activity	-	IEA	Function
GO:0004832	valine-tRNA ligase activity	21873635.	IBA	Function
GO:0004832	valine-tRNA ligase activity	26761199.	TAS	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005739	mitochondrion	26761199.	TAS	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0006438	valyl-tRNA aminoacylation	21873635.	IBA	Process
GO:0006438	valyl-tRNA aminoacylation	26761199.	TAS	Process