EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0035987 (Gene tree)
Gene ID: 39083
Gene Symbol: CG3689
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 2798 bases
Position: chr3L:9411038-9413835
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0110163	NUDIX_2	PF13869.6	1.6e-78	1	1
FBpp0076184	NUDIX_2	PF13869.6	8.2e-60	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0076456	-	2225	-	FBpp0076184	203 (aa)	-	Q9VSY2
FBtr0110863	-	1375	-	FBpp0110163	237 (aa)	-	Q0E8G6

Gene Model

Click here to download FBgn0035987's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0035987's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0035987	CG3689	97	77.489	ENSG00000167005	NUDT21	100	87.324	Homo_sapiens
FBgn0035987	CG3689	97	76.856	ENSAPOG00000022515	nudt21	97	76.856	Acanthochromis_polyacanthus
FBgn0035987	CG3689	97	77.489	ENSAMEG00000016628	NUDT21	97	77.489	Ailuropoda_melanoleuca
FBgn0035987	CG3689	97	77.293	ENSACIG00000002809	nudt21	97	77.293	Amphilophus_citrinellus
FBgn0035987	CG3689	97	76.856	ENSAOCG00000004820	nudt21	97	76.856	Amphiprion_ocellaris
FBgn0035987	CG3689	97	76.856	ENSAPEG00000013434	nudt21	97	76.856	Amphiprion_percula
FBgn0035987	CG3689	97	76.856	ENSATEG00000002304	nudt21	97	76.856	Anabas_testudineus
FBgn0035987	CG3689	78	84.409	ENSAPLG00000012153	NUDT21	97	84.409	Anas_platyrhynchos
FBgn0035987	CG3689	97	77.056	ENSACAG00000007323	NUDT21	97	77.056	Anolis_carolinensis
FBgn0035987	CG3689	96	62.009	ENSANAG00000031404	-	99	62.009	Aotus_nancymaae
FBgn0035987	CG3689	97	77.489	ENSANAG00000034588	-	97	77.489	Aotus_nancymaae
FBgn0035987	CG3689	87	80.769	ENSANAG00000020715	-	97	80.769	Aotus_nancymaae
FBgn0035987	CG3689	97	77.729	ENSACLG00000004389	nudt21	97	77.729	Astatotilapia_calliptera
FBgn0035987	CG3689	97	77.293	ENSAMXG00000043933	nudt21	97	77.293	Astyanax_mexicanus
FBgn0035987	CG3689	97	77.489	ENSBTAG00000010207	NUDT21	97	77.489	Bos_taurus
FBgn0035987	CG3689	81	71.503	WBGene00009668	cfim-1	85	71.503	Caenorhabditis_elegans
FBgn0035987	CG3689	97	77.489	ENSCJAG00000041932	NUDT21	97	77.489	Callithrix_jacchus
FBgn0035987	CG3689	84	42.500	ENSCAFG00000030119	-	96	42.500	Canis_familiaris
FBgn0035987	CG3689	95	77.193	ENSCAFG00000002667	-	94	77.193	Canis_familiaris
FBgn0035987	CG3689	83	64.286	ENSCAFG00000006152	-	94	64.286	Canis_familiaris
FBgn0035987	CG3689	97	77.489	ENSCAFG00000023283	-	97	77.489	Canis_familiaris
FBgn0035987	CG3689	84	84.848	ENSCAFG00020010371	-	94	78.995	Canis_lupus_dingo
FBgn0035987	CG3689	96	75.214	ENSCAFG00020004953	-	90	75.214	Canis_lupus_dingo
FBgn0035987	CG3689	97	77.489	ENSCHIG00000026616	NUDT21	97	77.489	Capra_hircus
FBgn0035987	CG3689	97	77.489	ENSTSYG00000014602	NUDT21	97	77.489	Carlito_syrichta
FBgn0035987	CG3689	58	84.746	ENSCAPG00000010638	NUDT21	100	84.746	Cavia_aperea
FBgn0035987	CG3689	97	75.758	ENSCPOG00000003705	NUDT21	96	86.631	Cavia_porcellus
FBgn0035987	CG3689	97	59.574	ENSCCAG00000027748	-	97	59.574	Cebus_capucinus
FBgn0035987	CG3689	97	77.489	ENSCCAG00000035510	NUDT21	97	77.489	Cebus_capucinus
FBgn0035987	CG3689	97	77.489	ENSCATG00000042445	NUDT21	97	77.489	Cercocebus_atys
FBgn0035987	CG3689	97	77.489	ENSCLAG00000005751	NUDT21	90	84.817	Chinchilla_lanigera
FBgn0035987	CG3689	97	77.489	ENSCSAG00000005136	NUDT21	97	77.489	Chlorocebus_sabaeus
FBgn0035987	CG3689	97	77.489	ENSCPBG00000011976	NUDT21	97	77.489	Chrysemys_picta_bellii
FBgn0035987	CG3689	96	75.758	ENSCING00000018240	-	97	75.758	Ciona_intestinalis
FBgn0035987	CG3689	96	76.522	ENSCSAVG00000004322	-	97	76.522	Ciona_savignyi
FBgn0035987	CG3689	97	77.489	ENSCANG00000036650	NUDT21	97	77.489	Colobus_angolensis_palliatus
FBgn0035987	CG3689	90	60.280	ENSCGRG00001007481	-	93	60.280	Cricetulus_griseus_chok1gshd
FBgn0035987	CG3689	97	77.489	ENSCGRG00001016313	Nudt21	97	77.489	Cricetulus_griseus_chok1gshd
FBgn0035987	CG3689	97	77.489	ENSCGRG00000016451	Nudt21	97	77.489	Cricetulus_griseus_crigri
FBgn0035987	CG3689	90	60.280	ENSCGRG00000009012	-	93	60.280	Cricetulus_griseus_crigri
FBgn0035987	CG3689	97	77.293	ENSCSEG00000001524	nudt21	97	77.293	Cynoglossus_semilaevis
FBgn0035987	CG3689	97	77.729	ENSCVAG00000009683	nudt21	97	77.729	Cyprinodon_variegatus
FBgn0035987	CG3689	97	77.586	ENSDARG00000003153	nudt21	97	77.586	Danio_rerio
FBgn0035987	CG3689	92	73.636	ENSDNOG00000034510	-	97	73.636	Dasypus_novemcinctus
FBgn0035987	CG3689	84	61.307	ENSDORG00000030074	-	89	61.307	Dipodomys_ordii
FBgn0035987	CG3689	97	77.489	ENSDORG00000005129	-	97	77.489	Dipodomys_ordii
FBgn0035987	CG3689	94	76.889	ENSETEG00000013634	NUDT21	97	76.889	Echinops_telfairi
FBgn0035987	CG3689	99	73.840	ENSEBUG00000002498	nudt21	98	84.127	Eptatretus_burgeri
FBgn0035987	CG3689	97	77.489	ENSEASG00005004882	NUDT21	97	77.489	Equus_asinus_asinus
FBgn0035987	CG3689	97	77.489	ENSECAG00000001043	NUDT21	97	77.489	Equus_caballus
FBgn0035987	CG3689	97	77.489	ENSEEUG00000003402	NUDT21	97	77.489	Erinaceus_europaeus
FBgn0035987	CG3689	99	74.895	ENSELUG00000011938	-	96	74.895	Esox_lucius
FBgn0035987	CG3689	97	77.293	ENSELUG00000016262	-	97	77.293	Esox_lucius
FBgn0035987	CG3689	97	77.489	ENSFCAG00000008669	NUDT21	97	77.489	Felis_catus
FBgn0035987	CG3689	97	77.489	ENSFALG00000007561	NUDT21	97	77.489	Ficedula_albicollis
FBgn0035987	CG3689	97	77.489	ENSFDAG00000011750	NUDT21	97	77.489	Fukomys_damarensis
FBgn0035987	CG3689	77	85.714	ENSFHEG00000011485	nudt21	88	85.714	Fundulus_heteroclitus
FBgn0035987	CG3689	95	75.000	ENSGMOG00000002872	nudt21	97	75.000	Gadus_morhua
FBgn0035987	CG3689	97	77.293	ENSGAFG00000017473	nudt21	97	77.293	Gambusia_affinis
FBgn0035987	CG3689	97	74.672	ENSGACG00000015869	nudt21	95	74.672	Gasterosteus_aculeatus
FBgn0035987	CG3689	97	77.489	ENSGAGG00000017367	NUDT21	97	77.489	Gopherus_agassizii
FBgn0035987	CG3689	97	77.489	ENSGGOG00000002375	NUDT21	97	77.489	Gorilla_gorilla
FBgn0035987	CG3689	95	76.339	ENSHBUG00000015015	nudt21	97	76.339	Haplochromis_burtoni
FBgn0035987	CG3689	50	65.049	ENSHGLG00000002145	-	88	65.049	Heterocephalus_glaber_female
FBgn0035987	CG3689	97	77.489	ENSHGLG00000015947	NUDT21	97	77.489	Heterocephalus_glaber_female
FBgn0035987	CG3689	97	71.861	ENSHGLG00100000342	-	97	71.861	Heterocephalus_glaber_male
FBgn0035987	CG3689	99	73.729	ENSHGLG00100009154	-	99	73.729	Heterocephalus_glaber_male
FBgn0035987	CG3689	97	77.489	ENSHGLG00100011788	NUDT21	97	77.489	Heterocephalus_glaber_male
FBgn0035987	CG3689	97	78.166	ENSHCOG00000004360	nudt21	97	78.166	Hippocampus_comes
FBgn0035987	CG3689	97	77.293	ENSIPUG00000004208	nudt21	97	77.293	Ictalurus_punctatus
FBgn0035987	CG3689	97	77.489	ENSSTOG00000005838	NUDT21	97	77.489	Ictidomys_tridecemlineatus
FBgn0035987	CG3689	97	77.489	ENSJJAG00000017101	Nudt21	97	77.489	Jaculus_jaculus
FBgn0035987	CG3689	97	77.729	ENSKMAG00000008705	nudt21	97	77.729	Kryptolebias_marmoratus
FBgn0035987	CG3689	97	77.293	ENSLBEG00000024494	nudt21	97	77.293	Labrus_bergylta
FBgn0035987	CG3689	97	77.489	ENSLACG00000015324	NUDT21	97	77.489	Latimeria_chalumnae
FBgn0035987	CG3689	97	76.419	ENSLOCG00000008005	nudt21	97	76.419	Lepisosteus_oculatus
FBgn0035987	CG3689	84	60.101	ENSLAFG00000029402	-	99	60.101	Loxodonta_africana
FBgn0035987	CG3689	97	77.489	ENSLAFG00000028465	-	97	77.489	Loxodonta_africana
FBgn0035987	CG3689	97	77.489	ENSMFAG00000038276	NUDT21	97	77.489	Macaca_fascicularis
FBgn0035987	CG3689	97	77.489	ENSMMUG00000038955	NUDT21	97	77.489	Macaca_mulatta
FBgn0035987	CG3689	97	77.489	ENSMNEG00000038680	NUDT21	97	77.489	Macaca_nemestrina
FBgn0035987	CG3689	97	77.489	ENSMLEG00000041489	NUDT21	97	77.489	Mandrillus_leucophaeus
FBgn0035987	CG3689	97	76.856	ENSMAMG00000020931	nudt21	97	76.856	Mastacembelus_armatus
FBgn0035987	CG3689	97	77.729	ENSMZEG00005013153	nudt21	97	77.729	Maylandia_zebra
FBgn0035987	CG3689	79	86.631	ENSMGAG00000000975	NUDT21	99	86.631	Meleagris_gallopavo
FBgn0035987	CG3689	97	77.489	ENSMAUG00000000829	Nudt21	88	86.631	Mesocricetus_auratus
FBgn0035987	CG3689	97	77.489	ENSMICG00000046719	NUDT21	97	77.489	Microcebus_murinus
FBgn0035987	CG3689	97	77.489	ENSMOCG00000018234	Nudt21	93	83.333	Microtus_ochrogaster
FBgn0035987	CG3689	97	71.616	ENSMMOG00000016237	nudt21	97	71.616	Mola_mola
FBgn0035987	CG3689	97	77.489	ENSMODG00000013371	NUDT21	97	77.489	Monodelphis_domestica
FBgn0035987	CG3689	96	70.925	ENSMALG00000000627	nudt21	95	70.925	Monopterus_albus
FBgn0035987	CG3689	97	77.489	MGP_CAROLIEiJ_G0031388	Nudt21	97	77.489	Mus_caroli
FBgn0035987	CG3689	97	77.489	ENSMUSG00000031754	Nudt21	97	77.489	Mus_musculus
FBgn0035987	CG3689	97	77.489	MGP_PahariEiJ_G0022987	Nudt21	97	77.489	Mus_pahari
FBgn0035987	CG3689	97	77.489	MGP_SPRETEiJ_G0032507	Nudt21	97	77.489	Mus_spretus
FBgn0035987	CG3689	97	77.056	ENSMPUG00000019793	-	97	77.056	Mustela_putorius_furo
FBgn0035987	CG3689	97	77.489	ENSMPUG00000003451	-	97	77.489	Mustela_putorius_furo
FBgn0035987	CG3689	97	77.489	ENSMLUG00000004968	NUDT21	97	77.489	Myotis_lucifugus
FBgn0035987	CG3689	97	77.489	ENSNGAG00000023358	Nudt21	97	77.489	Nannospalax_galili
FBgn0035987	CG3689	95	77.232	ENSNBRG00000009313	nudt21	97	77.232	Neolamprologus_brichardi
FBgn0035987	CG3689	75	82.486	ENSNLEG00000009890	-	90	82.486	Nomascus_leucogenys
FBgn0035987	CG3689	97	77.489	ENSNLEG00000001963	NUDT21	97	77.489	Nomascus_leucogenys
FBgn0035987	CG3689	97	77.056	ENSMEUG00000015461	NUDT21	97	77.056	Notamacropus_eugenii
FBgn0035987	CG3689	97	75.325	ENSOPRG00000006689	NUDT21	97	75.325	Ochotona_princeps
FBgn0035987	CG3689	97	70.996	ENSODEG00000002256	-	97	70.996	Octodon_degus
FBgn0035987	CG3689	97	77.489	ENSODEG00000017012	-	97	77.489	Octodon_degus
FBgn0035987	CG3689	97	77.729	ENSONIG00000005734	nudt21	97	77.729	Oreochromis_niloticus
FBgn0035987	CG3689	85	84.314	ENSOANG00000012782	NUDT21	90	84.314	Ornithorhynchus_anatinus
FBgn0035987	CG3689	97	77.489	ENSOCUG00000017224	-	97	77.489	Oryctolagus_cuniculus
FBgn0035987	CG3689	97	76.190	ENSOCUG00000027084	-	97	76.190	Oryctolagus_cuniculus
FBgn0035987	CG3689	97	73.799	ENSOCUG00000021881	-	97	73.799	Oryctolagus_cuniculus
FBgn0035987	CG3689	97	77.729	ENSORLG00000008789	nudt21	97	77.729	Oryzias_latipes
FBgn0035987	CG3689	97	77.729	ENSORLG00020007635	nudt21	97	77.729	Oryzias_latipes_hni
FBgn0035987	CG3689	97	77.729	ENSORLG00015005300	nudt21	97	77.729	Oryzias_latipes_hsok
FBgn0035987	CG3689	97	77.729	ENSOMEG00000002368	nudt21	97	77.729	Oryzias_melastigma
FBgn0035987	CG3689	82	79.897	ENSOGAG00000033902	-	90	79.897	Otolemur_garnettii
FBgn0035987	CG3689	97	77.489	ENSOGAG00000014888	NUDT21	97	77.489	Otolemur_garnettii
FBgn0035987	CG3689	97	77.489	ENSOARG00000018460	NUDT21	97	77.489	Ovis_aries
FBgn0035987	CG3689	97	77.056	ENSPPAG00000043853	NUDT21	97	77.056	Pan_paniscus
FBgn0035987	CG3689	97	77.489	ENSPPRG00000023740	NUDT21	97	77.489	Panthera_pardus
FBgn0035987	CG3689	97	77.489	ENSPTIG00000021352	NUDT21	97	77.489	Panthera_tigris_altaica
FBgn0035987	CG3689	97	77.489	ENSPTRG00000008131	NUDT21	97	77.489	Pan_troglodytes
FBgn0035987	CG3689	97	77.489	ENSPANG00000019149	NUDT21	97	77.489	Papio_anubis
FBgn0035987	CG3689	97	77.293	ENSPKIG00000022541	-	97	77.293	Paramormyrops_kingsleyae
FBgn0035987	CG3689	97	77.293	ENSPKIG00000001620	nudt21	97	77.293	Paramormyrops_kingsleyae
FBgn0035987	CG3689	68	86.875	ENSPSIG00000008178	NUDT21	99	86.875	Pelodiscus_sinensis
FBgn0035987	CG3689	92	69.725	ENSPMGG00000002636	nudt21	88	69.725	Periophthalmus_magnuspinnatus
FBgn0035987	CG3689	97	77.489	ENSPEMG00000015463	Nudt21	97	77.489	Peromyscus_maniculatus_bairdii
FBgn0035987	CG3689	98	75.966	ENSPMAG00000000684	nudt21	99	75.966	Petromyzon_marinus
FBgn0035987	CG3689	97	77.489	ENSPCIG00000027199	NUDT21	97	77.489	Phascolarctos_cinereus
FBgn0035987	CG3689	97	78.166	ENSPFOG00000001419	nudt21	97	78.166	Poecilia_formosa
FBgn0035987	CG3689	97	78.166	ENSPLAG00000016420	nudt21	97	78.166	Poecilia_latipinna
FBgn0035987	CG3689	97	78.166	ENSPMEG00000022481	nudt21	97	78.166	Poecilia_mexicana
FBgn0035987	CG3689	97	78.166	ENSPREG00000001285	nudt21	97	78.166	Poecilia_reticulata
FBgn0035987	CG3689	97	77.489	ENSPPYG00000007365	NUDT21	97	77.489	Pongo_abelii
FBgn0035987	CG3689	97	67.532	ENSPCAG00000003875	NUDT21	97	67.532	Procavia_capensis
FBgn0035987	CG3689	96	65.066	ENSPCOG00000020893	-	99	65.066	Propithecus_coquereli
FBgn0035987	CG3689	89	70.755	ENSPCOG00000027587	-	99	70.755	Propithecus_coquereli
FBgn0035987	CG3689	97	77.489	ENSPCOG00000016104	-	97	77.489	Propithecus_coquereli
FBgn0035987	CG3689	79	86.631	ENSPVAG00000014583	NUDT21	99	86.631	Pteropus_vampyrus
FBgn0035987	CG3689	79	86.631	ENSPNYG00000014773	nudt21	94	86.631	Pundamilia_nyererei
FBgn0035987	CG3689	97	77.293	ENSPNAG00000017032	nudt21	97	77.293	Pygocentrus_nattereri
FBgn0035987	CG3689	97	77.489	ENSRNOG00000042983	Nudt21	97	77.489	Rattus_norvegicus
FBgn0035987	CG3689	97	77.489	ENSRBIG00000033736	-	97	77.489	Rhinopithecus_bieti
FBgn0035987	CG3689	97	76.856	ENSRBIG00000030142	-	97	76.856	Rhinopithecus_bieti
FBgn0035987	CG3689	97	77.489	ENSRROG00000034864	NUDT21	97	77.489	Rhinopithecus_roxellana
FBgn0035987	CG3689	97	77.489	ENSSBOG00000033712	NUDT21	97	77.489	Saimiri_boliviensis_boliviensis
FBgn0035987	CG3689	97	77.489	ENSSHAG00000009651	NUDT21	97	77.489	Sarcophilus_harrisii
FBgn0035987	CG3689	97	77.293	ENSSFOG00015011349	nudt21	78	77.293	Scleropages_formosus
FBgn0035987	CG3689	97	77.155	ENSSFOG00015013984	nudt21	97	77.155	Scleropages_formosus
FBgn0035987	CG3689	97	76.856	ENSSMAG00000000646	nudt21	97	76.856	Scophthalmus_maximus
FBgn0035987	CG3689	97	76.856	ENSSDUG00000019001	nudt21	97	76.856	Seriola_dumerili
FBgn0035987	CG3689	97	76.856	ENSSLDG00000018315	nudt21	97	76.856	Seriola_lalandi_dorsalis
FBgn0035987	CG3689	97	77.489	ENSSARG00000006493	NUDT21	97	77.489	Sorex_araneus
FBgn0035987	CG3689	97	77.489	ENSSPUG00000004128	NUDT21	97	77.489	Sphenodon_punctatus
FBgn0035987	CG3689	97	76.856	ENSSPAG00000010060	nudt21	97	76.856	Stegastes_partitus
FBgn0035987	CG3689	96	46.930	ENSSSCG00000032485	-	96	46.930	Sus_scrofa
FBgn0035987	CG3689	87	73.206	ENSSSCG00000004786	-	93	73.206	Sus_scrofa
FBgn0035987	CG3689	97	77.489	ENSSSCG00000034521	NUDT21	97	77.489	Sus_scrofa
FBgn0035987	CG3689	78	64.674	ENSSSCG00000007921	-	88	65.169	Sus_scrofa
FBgn0035987	CG3689	97	77.489	ENSTGUG00000006599	NUDT21	97	77.489	Taeniopygia_guttata
FBgn0035987	CG3689	97	77.293	ENSTRUG00000017953	nudt21	97	77.293	Takifugu_rubripes
FBgn0035987	CG3689	97	77.293	ENSTNIG00000009312	nudt21	97	77.293	Tetraodon_nigroviridis
FBgn0035987	CG3689	64	71.212	ENSTBEG00000007664	NUDT21	53	71.212	Tupaia_belangeri
FBgn0035987	CG3689	97	77.489	ENSTTRG00000013545	NUDT21	97	77.489	Tursiops_truncatus
FBgn0035987	CG3689	95	76.652	ENSUAMG00000016945	NUDT21	94	76.652	Ursus_americanus
FBgn0035987	CG3689	97	77.489	ENSUMAG00000001344	NUDT21	97	77.489	Ursus_maritimus
FBgn0035987	CG3689	97	77.489	ENSVPAG00000003701	NUDT21	97	77.489	Vicugna_pacos
FBgn0035987	CG3689	81	70.000	ENSVVUG00000021791	-	87	70.000	Vulpes_vulpes
FBgn0035987	CG3689	86	74.146	ENSVVUG00000013998	-	92	74.146	Vulpes_vulpes
FBgn0035987	CG3689	97	77.489	ENSXETG00000020017	nudt21	97	77.489	Xenopus_tropicalis
FBgn0035987	CG3689	97	77.293	ENSXMAG00000014172	nudt21	97	77.293	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003729	mRNA binding	21873635.	IBA	Function
GO:0005849	mRNA cleavage factor complex	21873635.	IBA	Component
GO:0006378	mRNA polyadenylation	-	IEA	Process
GO:0006397	mRNA processing	21873635.	IBA	Process
GO:0016787	hydrolase activity	-	IEA	Function
GO:0017091	AU-rich element binding	21873635.	IBA	Function