EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0036018 (Gene tree)
Gene ID: 39119
Gene Symbol: CG3335
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 3085 bases
Position: chr3L:9624237-9627321
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0076112	RRM_1	PF00076.22	2e-75	1	6
FBpp0076112	RRM_1	PF00076.22	2e-75	2	6
FBpp0076112	RRM_1	PF00076.22	2e-75	3	6
FBpp0076112	RRM_1	PF00076.22	2e-75	4	6
FBpp0076112	RRM_1	PF00076.22	2e-75	5	6
FBpp0076112	RRM_1	PF00076.22	2e-75	6	6

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0076383	-	2926	-	FBpp0076112	918 (aa)	-	Q8MYR4

Gene Model

Click here to download FBgn0036018's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0036018's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0036018	CG3335	96	38.006	ENSG00000122965	RBM19	70	57.500	Homo_sapiens
FBgn0036018	CG3335	98	37.461	ENSAPOG00000010507	rbm19	67	43.598	Acanthochromis_polyacanthus
FBgn0036018	CG3335	96	38.784	ENSAMEG00000008544	RBM19	66	42.704	Ailuropoda_melanoleuca
FBgn0036018	CG3335	73	42.984	ENSACIG00000017780	rbm19	68	44.961	Amphilophus_citrinellus
FBgn0036018	CG3335	98	38.180	ENSAOCG00000008554	rbm19	96	39.014	Amphiprion_ocellaris
FBgn0036018	CG3335	96	38.257	ENSAPEG00000022381	rbm19	96	39.159	Amphiprion_percula
FBgn0036018	CG3335	98	38.561	ENSATEG00000007000	rbm19	98	38.841	Anabas_testudineus
FBgn0036018	CG3335	91	37.204	ENSAPLG00000015319	RBM19	67	40.960	Anas_platyrhynchos
FBgn0036018	CG3335	97	40.816	ENSACAG00000005065	RBM19	89	42.447	Anolis_carolinensis
FBgn0036018	CG3335	71	42.027	ENSANAG00000024136	RBM19	66	42.704	Aotus_nancymaae
FBgn0036018	CG3335	98	36.991	ENSACLG00000001399	rbm19	98	36.886	Astatotilapia_calliptera
FBgn0036018	CG3335	65	41.304	ENSAMXG00000017073	rbm19	97	37.528	Astyanax_mexicanus
FBgn0036018	CG3335	96	39.608	ENSBTAG00000031824	RBM19	97	39.748	Bos_taurus
FBgn0036018	CG3335	88	40.136	WBGene00004315	rbd-1	100	37.310	Caenorhabditis_elegans
FBgn0036018	CG3335	69	42.661	ENSCJAG00000009798	RBM19	66	42.726	Callithrix_jacchus
FBgn0036018	CG3335	96	39.397	ENSCAFG00000009146	RBM19	88	42.573	Canis_familiaris
FBgn0036018	CG3335	96	39.501	ENSCAFG00020017862	RBM19	88	42.726	Canis_lupus_dingo
FBgn0036018	CG3335	96	40.065	ENSCHIG00000014917	RBM19	96	40.608	Capra_hircus
FBgn0036018	CG3335	88	37.070	ENSTSYG00000007207	RBM19	63	40.830	Carlito_syrichta
FBgn0036018	CG3335	95	38.232	ENSCAPG00000006869	RBM19	67	42.813	Cavia_aperea
FBgn0036018	CG3335	100	38.217	ENSCPOG00000026629	RBM19	96	38.567	Cavia_porcellus
FBgn0036018	CG3335	83	34.793	ENSCCAG00000026637	-	91	39.474	Cebus_capucinus
FBgn0036018	CG3335	71	41.902	ENSCCAG00000021665	-	66	43.032	Cebus_capucinus
FBgn0036018	CG3335	71	41.384	ENSCATG00000035841	RBM19	95	38.339	Cercocebus_atys
FBgn0036018	CG3335	96	37.695	ENSCLAG00000009965	RBM19	73	40.706	Chinchilla_lanigera
FBgn0036018	CG3335	71	38.966	ENSCSAG00000002352	RBM19	65	39.742	Chlorocebus_sabaeus
FBgn0036018	CG3335	69	41.617	ENSCPBG00000011990	RBM19	65	43.036	Chrysemys_picta_bellii
FBgn0036018	CG3335	85	41.545	ENSCING00000023076	-	94	43.079	Ciona_intestinalis
FBgn0036018	CG3335	96	38.525	ENSCANG00000035927	RBM19	96	38.205	Colobus_angolensis_palliatus
FBgn0036018	CG3335	71	41.864	ENSCGRG00001000323	Rbm19	69	41.606	Cricetulus_griseus_chok1gshd
FBgn0036018	CG3335	71	41.864	ENSCGRG00000010371	Rbm19	69	41.606	Cricetulus_griseus_crigri
FBgn0036018	CG3335	96	38.598	ENSCSEG00000017436	rbm19	97	39.116	Cynoglossus_semilaevis
FBgn0036018	CG3335	99	37.539	ENSCVAG00000000300	rbm19	100	37.269	Cyprinodon_variegatus
FBgn0036018	CG3335	96	37.846	ENSDARG00000042590	rbm19	97	37.938	Danio_rerio
FBgn0036018	CG3335	96	38.066	ENSDNOG00000024534	RBM19	93	39.248	Dasypus_novemcinctus
FBgn0036018	CG3335	96	37.433	ENSDORG00000008549	Rbm19	100	37.315	Dipodomys_ordii
FBgn0036018	CG3335	54	49.254	ENSETEG00000016887	-	51	49.254	Echinops_telfairi
FBgn0036018	CG3335	80	35.457	ENSEBUG00000008521	-	80	40.994	Eptatretus_burgeri
FBgn0036018	CG3335	96	37.952	ENSEASG00005009452	RBM19	66	42.243	Equus_asinus_asinus
FBgn0036018	CG3335	99	37.726	ENSECAG00000023716	RBM19	66	42.266	Equus_caballus
FBgn0036018	CG3335	96	38.478	ENSELUG00000012561	rbm19	97	37.633	Esox_lucius
FBgn0036018	CG3335	96	37.683	ENSFCAG00000002962	RBM19	96	38.901	Felis_catus
FBgn0036018	CG3335	97	39.435	ENSFALG00000007768	RBM19	89	42.704	Ficedula_albicollis
FBgn0036018	CG3335	73	40.725	ENSFDAG00000004629	RBM19	69	40.816	Fukomys_damarensis
FBgn0036018	CG3335	96	37.487	ENSFHEG00000012578	rbm19	97	37.244	Fundulus_heteroclitus
FBgn0036018	CG3335	96	35.992	ENSGMOG00000013120	rbm19	93	41.900	Gadus_morhua
FBgn0036018	CG3335	87	44.720	ENSGALG00000008289	RBM19	82	42.857	Gallus_gallus
FBgn0036018	CG3335	96	36.870	ENSGAFG00000012337	rbm19	97	36.994	Gambusia_affinis
FBgn0036018	CG3335	96	37.792	ENSGACG00000009462	rbm19	99	37.726	Gasterosteus_aculeatus
FBgn0036018	CG3335	59	45.037	ENSGAGG00000019457	RBM19	91	45.404	Gopherus_agassizii
FBgn0036018	CG3335	96	38.422	ENSGGOG00000007371	RBM19	66	41.807	Gorilla_gorilla
FBgn0036018	CG3335	98	38.166	ENSHBUG00000009047	rbm19	98	38.634	Haplochromis_burtoni
FBgn0036018	CG3335	99	37.690	ENSHGLG00000010899	RBM19	69	41.973	Heterocephalus_glaber_female
FBgn0036018	CG3335	99	37.437	ENSHGLG00100017936	RBM19	69	41.364	Heterocephalus_glaber_male
FBgn0036018	CG3335	98	37.726	ENSHCOG00000016446	rbm19	98	37.566	Hippocampus_comes
FBgn0036018	CG3335	96	38.186	ENSIPUG00000023849	rbm19	97	38.397	Ictalurus_punctatus
FBgn0036018	CG3335	99	38.585	ENSKMAG00000014807	rbm19	73	42.963	Kryptolebias_marmoratus
FBgn0036018	CG3335	98	38.720	ENSLBEG00000012897	rbm19	98	38.847	Labrus_bergylta
FBgn0036018	CG3335	63	42.379	ENSLACG00000012030	RBM19	90	41.724	Latimeria_chalumnae
FBgn0036018	CG3335	96	38.050	ENSLOCG00000008341	rbm19	74	41.369	Lepisosteus_oculatus
FBgn0036018	CG3335	88	36.753	ENSLAFG00000004187	RBM19	65	40.455	Loxodonta_africana
FBgn0036018	CG3335	96	38.422	ENSMFAG00000046091	RBM19	96	38.100	Macaca_fascicularis
FBgn0036018	CG3335	96	38.525	ENSMMUG00000010496	RBM19	66	42.508	Macaca_mulatta
FBgn0036018	CG3335	96	36.268	ENSMNEG00000028452	RBM19	96	36.534	Macaca_nemestrina
FBgn0036018	CG3335	71	41.082	ENSMLEG00000034550	RBM19	68	41.593	Mandrillus_leucophaeus
FBgn0036018	CG3335	98	38.639	ENSMAMG00000014397	rbm19	67	43.836	Mastacembelus_armatus
FBgn0036018	CG3335	98	38.615	ENSMZEG00005016607	rbm19	98	38.269	Maylandia_zebra
FBgn0036018	CG3335	95	33.190	ENSMGAG00000010087	RBM19	97	33.584	Meleagris_gallopavo
FBgn0036018	CG3335	71	41.892	ENSMAUG00000019290	Rbm19	96	38.349	Mesocricetus_auratus
FBgn0036018	CG3335	69	42.249	ENSMICG00000014423	RBM19	66	42.770	Microcebus_murinus
FBgn0036018	CG3335	96	37.460	ENSMMOG00000017839	rbm19	67	43.760	Mola_mola
FBgn0036018	CG3335	97	39.644	ENSMODG00000003597	RBM19	97	39.341	Monodelphis_domestica
FBgn0036018	CG3335	71	41.501	ENSMALG00000012647	rbm19	68	43.272	Monopterus_albus
FBgn0036018	CG3335	71	41.481	MGP_CAROLIEiJ_G0027656	Rbm19	66	42.923	Mus_caroli
FBgn0036018	CG3335	71	41.654	ENSMUSG00000029594	Rbm19	66	43.405	Mus_musculus
FBgn0036018	CG3335	71	41.654	MGP_PahariEiJ_G0024238	Rbm19	66	42.945	Mus_pahari
FBgn0036018	CG3335	96	39.108	MGP_SPRETEiJ_G0028656	Rbm19	66	43.185	Mus_spretus
FBgn0036018	CG3335	71	41.263	ENSMPUG00000002694	RBM19	65	42.073	Mustela_putorius_furo
FBgn0036018	CG3335	96	37.526	ENSMLUG00000015075	RBM19	88	42.145	Myotis_lucifugus
FBgn0036018	CG3335	69	42.178	ENSNGAG00000009076	Rbm19	66	43.032	Nannospalax_galili
FBgn0036018	CG3335	96	38.131	ENSNBRG00000005913	rbm19	68	44.150	Neolamprologus_brichardi
FBgn0036018	CG3335	96	38.214	ENSNLEG00000000190	RBM19	66	42.266	Nomascus_leucogenys
FBgn0036018	CG3335	89	37.143	ENSMEUG00000004045	RBM19	67	35.152	Notamacropus_eugenii
FBgn0036018	CG3335	96	37.832	ENSOPRG00000012064	RBM19	85	42.530	Ochotona_princeps
FBgn0036018	CG3335	69	41.731	ENSODEG00000012977	RBM19	65	42.040	Octodon_degus
FBgn0036018	CG3335	98	38.124	ENSONIG00000013576	rbm19	86	43.988	Oreochromis_niloticus
FBgn0036018	CG3335	96	39.545	ENSOCUG00000009398	RBM19	65	43.526	Oryctolagus_cuniculus
FBgn0036018	CG3335	71	42.185	ENSORLG00000008077	rbm19	99	38.965	Oryzias_latipes
FBgn0036018	CG3335	97	38.120	ENSORLG00020013187	rbm19	99	38.906	Oryzias_latipes_hni
FBgn0036018	CG3335	98	38.130	ENSORLG00015001774	rbm19	98	38.703	Oryzias_latipes_hsok
FBgn0036018	CG3335	98	38.801	ENSOMEG00000003334	rbm19	67	42.922	Oryzias_melastigma
FBgn0036018	CG3335	88	36.983	ENSOGAG00000000602	RBM19	66	40.242	Otolemur_garnettii
FBgn0036018	CG3335	96	40.326	ENSOARG00000006827	RBM19	96	40.543	Ovis_aries
FBgn0036018	CG3335	96	38.135	ENSPPAG00000043712	RBM19	66	42.355	Pan_paniscus
FBgn0036018	CG3335	96	37.971	ENSPPRG00000023027	RBM19	96	38.372	Panthera_pardus
FBgn0036018	CG3335	96	37.633	ENSPTIG00000011096	RBM19	68	40.944	Panthera_tigris_altaica
FBgn0036018	CG3335	96	38.135	ENSPTRG00000005494	RBM19	66	42.355	Pan_troglodytes
FBgn0036018	CG3335	71	41.237	ENSPANG00000004795	RBM19	95	37.849	Papio_anubis
FBgn0036018	CG3335	96	37.916	ENSPKIG00000017095	rbm19	97	37.742	Paramormyrops_kingsleyae
FBgn0036018	CG3335	67	42.472	ENSPSIG00000008191	RBM19	70	42.788	Pelodiscus_sinensis
FBgn0036018	CG3335	80	50.505	ENSPMGG00000019087	rbm19	89	50.505	Periophthalmus_magnuspinnatus
FBgn0036018	CG3335	96	38.373	ENSPEMG00000018058	Rbm19	69	41.485	Peromyscus_maniculatus_bairdii
FBgn0036018	CG3335	71	42.121	ENSPCIG00000028861	RBM19	67	43.722	Phascolarctos_cinereus
FBgn0036018	CG3335	69	40.781	ENSPFOG00000015300	rbm19	97	37.979	Poecilia_formosa
FBgn0036018	CG3335	96	37.247	ENSPLAG00000000059	rbm19	97	38.085	Poecilia_latipinna
FBgn0036018	CG3335	96	37.194	ENSPMEG00000018585	rbm19	97	38.075	Poecilia_mexicana
FBgn0036018	CG3335	96	37.112	ENSPREG00000000978	rbm19	97	38.561	Poecilia_reticulata
FBgn0036018	CG3335	67	42.271	ENSPPYG00000004993	RBM19	96	38.397	Pongo_abelii
FBgn0036018	CG3335	96	38.676	ENSPCOG00000016190	RBM19	66	43.472	Propithecus_coquereli
FBgn0036018	CG3335	96	38.533	ENSPVAG00000011618	RBM19	66	42.966	Pteropus_vampyrus
FBgn0036018	CG3335	98	38.836	ENSPNYG00000017434	rbm19	98	39.744	Pundamilia_nyererei
FBgn0036018	CG3335	96	37.367	ENSPNAG00000012069	rbm19	97	37.792	Pygocentrus_nattereri
FBgn0036018	CG3335	96	38.900	ENSRNOG00000001397	Rbm19	66	43.385	Rattus_norvegicus
FBgn0036018	CG3335	88	42.857	ENSRBIG00000041419	RBM19	88	42.290	Rhinopithecus_bieti
FBgn0036018	CG3335	88	42.857	ENSRROG00000031938	RBM19	88	42.595	Rhinopithecus_roxellana
FBgn0036018	CG3335	94	31.034	YPR112C	-	58	33.774	Saccharomyces_cerevisiae
FBgn0036018	CG3335	86	37.179	ENSSBOG00000022679	-	88	35.935	Saimiri_boliviensis_boliviensis
FBgn0036018	CG3335	96	38.159	ENSSBOG00000021434	-	88	41.985	Saimiri_boliviensis_boliviensis
FBgn0036018	CG3335	97	40.000	ENSSHAG00000012256	RBM19	67	44.599	Sarcophilus_harrisii
FBgn0036018	CG3335	96	37.526	ENSSFOG00015005124	rbm19	97	37.460	Scleropages_formosus
FBgn0036018	CG3335	71	42.835	ENSSMAG00000011828	rbm19	66	43.445	Scophthalmus_maximus
FBgn0036018	CG3335	98	38.747	ENSSDUG00000013544	rbm19	98	39.532	Seriola_dumerili
FBgn0036018	CG3335	90	40.967	ENSSLDG00000025413	rbm19	85	47.475	Seriola_lalandi_dorsalis
FBgn0036018	CG3335	59	44.565	ENSSPUG00000011064	RBM19	91	44.565	Sphenodon_punctatus
FBgn0036018	CG3335	97	37.487	ENSSPAG00000018685	rbm19	69	42.835	Stegastes_partitus
FBgn0036018	CG3335	96	40.370	ENSSSCG00000009868	RBM19	96	40.785	Sus_scrofa
FBgn0036018	CG3335	96	39.308	ENSTGUG00000009017	RBM19	83	42.266	Taeniopygia_guttata
FBgn0036018	CG3335	97	37.553	ENSTRUG00000016032	rbm19	77	47.917	Takifugu_rubripes
FBgn0036018	CG3335	79	41.844	ENSTTRG00000003987	RBM19	80	41.844	Tursiops_truncatus
FBgn0036018	CG3335	95	39.030	ENSUAMG00000002076	RBM19	66	43.272	Ursus_americanus
FBgn0036018	CG3335	98	39.264	ENSUMAG00000010816	RBM19	67	43.425	Ursus_maritimus
FBgn0036018	CG3335	96	39.360	ENSVVUG00000007886	RBM19	88	42.791	Vulpes_vulpes
FBgn0036018	CG3335	73	39.734	ENSXETG00000017668	rbm19	70	39.734	Xenopus_tropicalis
FBgn0036018	CG3335	96	35.929	ENSXCOG00000016995	rbm19	77	47.475	Xiphophorus_couchianus
FBgn0036018	CG3335	96	37.326	ENSXMAG00000007641	rbm19	97	37.700	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003729	mRNA binding	10908586.	ISS	Function
GO:0004386	helicase activity	10908586.	ISS	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0016607	nuclear speck	21873635.	IBA	Component
GO:0045292	mRNA cis splicing, via spliceosome	21873635.	IBA	Process