EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0036104 (Gene tree)
Gene ID: 39218
Gene Symbol: CG6418
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 2723 bases
Position: chr3L:10876315-10879037
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0076003	ResIII	PF04851.15	7.2e-05	1	1
FBpp0076003	DEAD	PF00270.29	3e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0076274	-	2723	-	FBpp0076003	791 (aa)	-	Q9VTC1

Gene Model

Click here to download FBgn0036104's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0036104's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0036104	CG6418	50	38.835	FBgn0263231	bel	54	38.140
FBgn0036104	CG6418	55	39.073	FBgn0037549	CG7878	64	38.581
FBgn0036104	CG6418	55	41.084	FBgn0003261	Rm62	80	42.120
FBgn0036104	CG6418	51	30.120	FBgn0036754	CG5589	69	30.120
FBgn0036104	CG6418	54	37.642	FBgn0015331	abs	70	37.642
FBgn0036104	CG6418	55	41.124	FBgn0035720	CG10077	77	41.622

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0036104	CG6418	87	56.133	ENSG00000198231	DDX42	99	49.495	Homo_sapiens
FBgn0036104	CG6418	84	58.045	ENSAPOG00000017675	ddx42	69	60.841	Acanthochromis_polyacanthus
FBgn0036104	CG6418	87	56.052	ENSAMEG00000003200	DDX42	65	60.514	Ailuropoda_melanoleuca
FBgn0036104	CG6418	72	62.390	ENSACIG00000007376	ddx42	75	60.399	Amphilophus_citrinellus
FBgn0036104	CG6418	84	57.997	ENSAOCG00000003520	ddx42	67	60.841	Amphiprion_ocellaris
FBgn0036104	CG6418	84	57.848	ENSAPEG00000000984	ddx42	67	60.194	Amphiprion_percula
FBgn0036104	CG6418	93	55.047	ENSATEG00000022920	ddx42	68	61.039	Anabas_testudineus
FBgn0036104	CG6418	92	55.962	ENSAPLG00000010544	DDX42	66	61.958	Anas_platyrhynchos
FBgn0036104	CG6418	93	54.521	ENSACAG00000003994	DDX42	65	60.450	Anolis_carolinensis
FBgn0036104	CG6418	87	56.277	ENSANAG00000035693	DDX42	79	62.324	Aotus_nancymaae
FBgn0036104	CG6418	84	57.612	ENSACLG00000025113	ddx42	67	60.356	Astatotilapia_calliptera
FBgn0036104	CG6418	85	56.414	ENSAMXG00000011435	ddx42	72	54.533	Astyanax_mexicanus
FBgn0036104	CG6418	84	56.437	ENSBTAG00000021058	DDX42	83	59.375	Bos_taurus
FBgn0036104	CG6418	93	48.096	WBGene00008119	C46F11.4	80	53.130	Caenorhabditis_elegans
FBgn0036104	CG6418	87	56.999	ENSCJAG00000019649	DDX42	82	60.461	Callithrix_jacchus
FBgn0036104	CG6418	87	55.988	ENSCAFG00000012818	DDX42	65	60.289	Canis_familiaris
FBgn0036104	CG6418	87	56.052	ENSCAFG00020026631	DDX42	66	60.514	Canis_lupus_dingo
FBgn0036104	CG6418	84	57.485	ENSCHIG00000014431	DDX42	67	60.645	Capra_hircus
FBgn0036104	CG6418	87	55.844	ENSTSYG00000001380	DDX42	74	59.930	Carlito_syrichta
FBgn0036104	CG6418	79	46.302	ENSCAPG00000013621	DDX42	77	46.612	Cavia_aperea
FBgn0036104	CG6418	92	53.888	ENSCPOG00000005633	DDX42	66	60.353	Cavia_porcellus
FBgn0036104	CG6418	72	62.324	ENSCCAG00000020612	DDX42	78	62.324	Cebus_capucinus
FBgn0036104	CG6418	87	56.133	ENSCATG00000030490	DDX42	73	62.324	Cercocebus_atys
FBgn0036104	CG6418	92	54.025	ENSCLAG00000003497	DDX42	66	60.514	Chinchilla_lanigera
FBgn0036104	CG6418	87	53.295	ENSCSAG00000003914	DDX42	65	57.372	Chlorocebus_sabaeus
FBgn0036104	CG6418	84	58.771	ENSCPBG00000026682	DDX42	65	60.737	Chrysemys_picta_bellii
FBgn0036104	CG6418	62	58.197	ENSCING00000001837	-	99	56.707	Ciona_intestinalis
FBgn0036104	CG6418	87	56.133	ENSCANG00000034663	DDX42	80	62.324	Colobus_angolensis_palliatus
FBgn0036104	CG6418	84	57.485	ENSCGRG00001009775	Ddx42	66	60.514	Cricetulus_griseus_chok1gshd
FBgn0036104	CG6418	84	57.485	ENSCGRG00000011718	Ddx42	66	60.514	Cricetulus_griseus_crigri
FBgn0036104	CG6418	84	57.271	ENSCSEG00000021574	ddx42	67	59.355	Cynoglossus_semilaevis
FBgn0036104	CG6418	84	58.045	ENSCVAG00000011404	ddx42	67	60.552	Cyprinodon_variegatus
FBgn0036104	CG6418	84	58.657	ENSDARG00000037928	ddx42	67	60.743	Danio_rerio
FBgn0036104	CG6418	88	56.188	ENSDNOG00000007961	DDX42	67	59.810	Dasypus_novemcinctus
FBgn0036104	CG6418	72	58.844	ENSDORG00000004199	Ddx42	65	55.863	Dipodomys_ordii
FBgn0036104	CG6418	87	55.731	ENSEBUG00000001155	ddx42	75	59.164	Eptatretus_burgeri
FBgn0036104	CG6418	87	56.052	ENSEASG00005013089	DDX42	79	62.390	Equus_asinus_asinus
FBgn0036104	CG6418	87	56.052	ENSECAG00000022684	DDX42	65	60.514	Equus_caballus
FBgn0036104	CG6418	64	56.974	ENSEEUG00000009144	DDX42	61	61.283	Erinaceus_europaeus
FBgn0036104	CG6418	84	58.771	ENSELUG00000020593	ddx42	66	60.841	Esox_lucius
FBgn0036104	CG6418	87	55.908	ENSFCAG00000003499	DDX42	71	59.835	Felis_catus
FBgn0036104	CG6418	91	56.540	ENSFALG00000004675	DDX42	54	61.798	Ficedula_albicollis
FBgn0036104	CG6418	92	54.025	ENSFDAG00000020516	DDX42	66	60.514	Fukomys_damarensis
FBgn0036104	CG6418	84	58.045	ENSFHEG00000023290	ddx42	68	60.390	Fundulus_heteroclitus
FBgn0036104	CG6418	82	53.939	ENSGMOG00000004595	ddx42	67	56.343	Gadus_morhua
FBgn0036104	CG6418	87	57.245	ENSGALG00000000581	DDX42	65	61.798	Gallus_gallus
FBgn0036104	CG6418	93	54.521	ENSGAFG00000011846	ddx42	76	55.153	Gambusia_affinis
FBgn0036104	CG6418	94	51.181	ENSGACG00000009782	ddx42	70	56.774	Gasterosteus_aculeatus
FBgn0036104	CG6418	84	58.533	ENSGAGG00000024411	DDX42	64	60.835	Gopherus_agassizii
FBgn0036104	CG6418	87	56.133	ENSGGOG00000006779	DDX42	78	62.324	Gorilla_gorilla
FBgn0036104	CG6418	84	57.612	ENSHBUG00000008705	ddx42	67	60.356	Haplochromis_burtoni
FBgn0036104	CG6418	92	51.989	ENSHGLG00000010024	DDX42	64	58.158	Heterocephalus_glaber_female
FBgn0036104	CG6418	92	53.888	ENSHGLG00100004479	-	66	60.514	Heterocephalus_glaber_male
FBgn0036104	CG6418	87	43.560	ENSHGLG00100007138	-	65	45.880	Heterocephalus_glaber_male
FBgn0036104	CG6418	84	59.036	ENSHCOG00000003357	ddx42	74	66.601	Hippocampus_comes
FBgn0036104	CG6418	84	58.074	ENSIPUG00000013327	ddx42	68	60.194	Ictalurus_punctatus
FBgn0036104	CG6418	87	56.052	ENSSTOG00000008922	DDX42	66	60.514	Ictidomys_tridecemlineatus
FBgn0036104	CG6418	87	56.052	ENSJJAG00000011727	Ddx42	67	60.353	Jaculus_jaculus
FBgn0036104	CG6418	84	57.721	ENSKMAG00000009914	ddx42	68	61.513	Kryptolebias_marmoratus
FBgn0036104	CG6418	84	56.973	ENSLBEG00000004687	ddx42	63	63.768	Labrus_bergylta
FBgn0036104	CG6418	84	59.549	ENSLACG00000013476	DDX42	66	61.613	Latimeria_chalumnae
FBgn0036104	CG6418	84	58.471	ENSLOCG00000011764	ddx42	67	60.611	Lepisosteus_oculatus
FBgn0036104	CG6418	93	53.504	ENSLAFG00000003249	DDX42	66	60.353	Loxodonta_africana
FBgn0036104	CG6418	87	56.133	ENSMFAG00000031356	DDX42	73	62.324	Macaca_fascicularis
FBgn0036104	CG6418	87	56.133	ENSMMUG00000016762	DDX42	77	62.324	Macaca_mulatta
FBgn0036104	CG6418	87	56.133	ENSMNEG00000038250	DDX42	74	62.324	Macaca_nemestrina
FBgn0036104	CG6418	87	56.133	ENSMLEG00000043080	DDX42	73	59.930	Mandrillus_leucophaeus
FBgn0036104	CG6418	93	54.899	ENSMAMG00000021888	ddx42	65	60.905	Mastacembelus_armatus
FBgn0036104	CG6418	84	57.612	ENSMZEG00005023103	ddx42	67	60.356	Maylandia_zebra
FBgn0036104	CG6418	87	57.245	ENSMGAG00000001822	DDX42	65	61.798	Meleagris_gallopavo
FBgn0036104	CG6418	75	61.409	ENSMAUG00000020774	-	79	60.500	Mesocricetus_auratus
FBgn0036104	CG6418	87	56.133	ENSMICG00000009952	DDX42	66	60.582	Microcebus_murinus
FBgn0036104	CG6418	84	57.485	ENSMOCG00000015504	Ddx42	66	60.514	Microtus_ochrogaster
FBgn0036104	CG6418	93	52.639	ENSMMOG00000016963	ddx42	62	58.306	Mola_mola
FBgn0036104	CG6418	54	56.092	ENSMODG00000009917	-	76	63.912	Monodelphis_domestica
FBgn0036104	CG6418	93	54.374	ENSMALG00000007800	ddx42	68	60.680	Monopterus_albus
FBgn0036104	CG6418	88	55.540	MGP_CAROLIEiJ_G0017314	Ddx42	66	60.514	Mus_caroli
FBgn0036104	CG6418	88	55.398	ENSMUSG00000020705	Ddx42	66	60.353	Mus_musculus
FBgn0036104	CG6418	79	58.637	MGP_PahariEiJ_G0018444	-	79	63.750	Mus_pahari
FBgn0036104	CG6418	84	57.485	MGP_SPRETEiJ_G0018158	Ddx42	66	60.514	Mus_spretus
FBgn0036104	CG6418	87	56.052	ENSMPUG00000014921	DDX42	65	60.514	Mustela_putorius_furo
FBgn0036104	CG6418	87	56.196	ENSMLUG00000011645	DDX42	64	60.674	Myotis_lucifugus
FBgn0036104	CG6418	84	57.485	ENSNGAG00000021897	Ddx42	66	60.514	Nannospalax_galili
FBgn0036104	CG6418	84	57.207	ENSNBRG00000004466	ddx42	67	59.935	Neolamprologus_brichardi
FBgn0036104	CG6418	87	56.133	ENSNLEG00000004248	DDX42	79	62.324	Nomascus_leucogenys
FBgn0036104	CG6418	70	50.179	ENSMEUG00000013227	-	69	50.087	Notamacropus_eugenii
FBgn0036104	CG6418	87	56.340	ENSOPRG00000014960	DDX42	65	60.645	Ochotona_princeps
FBgn0036104	CG6418	92	51.160	ENSODEG00000007810	DDX42	65	57.143	Octodon_degus
FBgn0036104	CG6418	84	57.612	ENSONIG00000000734	ddx42	67	60.356	Oreochromis_niloticus
FBgn0036104	CG6418	62	63.083	ENSOANG00000000265	DDX42	97	59.007	Ornithorhynchus_anatinus
FBgn0036104	CG6418	87	56.340	ENSOCUG00000004304	DDX42	60	60.645	Oryctolagus_cuniculus
FBgn0036104	CG6418	83	57.335	ENSORLG00000002395	ddx42	66	60.064	Oryzias_latipes
FBgn0036104	CG6418	83	57.186	ENSORLG00020011621	ddx42	68	59.903	Oryzias_latipes_hni
FBgn0036104	CG6418	83	57.335	ENSORLG00015004487	ddx42	68	60.064	Oryzias_latipes_hsok
FBgn0036104	CG6418	84	58.021	ENSOMEG00000020093	ddx42	68	60.356	Oryzias_melastigma
FBgn0036104	CG6418	87	56.133	ENSOGAG00000006872	DDX42	65	60.582	Otolemur_garnettii
FBgn0036104	CG6418	84	57.485	ENSOARG00000013540	DDX42	64	60.645	Ovis_aries
FBgn0036104	CG6418	87	56.133	ENSPPAG00000007496	DDX42	78	62.324	Pan_paniscus
FBgn0036104	CG6418	87	55.908	ENSPPRG00000002740	DDX42	65	60.645	Panthera_pardus
FBgn0036104	CG6418	87	55.908	ENSPTIG00000009932	DDX42	65	60.645	Panthera_tigris_altaica
FBgn0036104	CG6418	87	56.133	ENSPTRG00000009523	DDX42	78	62.324	Pan_troglodytes
FBgn0036104	CG6418	87	56.133	ENSPANG00000020990	DDX42	73	62.324	Papio_anubis
FBgn0036104	CG6418	84	59.220	ENSPKIG00000002901	ddx42	71	61.389	Paramormyrops_kingsleyae
FBgn0036104	CG6418	84	58.832	ENSPSIG00000010289	DDX42	74	61.156	Pelodiscus_sinensis
FBgn0036104	CG6418	84	56.712	ENSPMGG00000009323	ddx42	66	58.632	Periophthalmus_magnuspinnatus
FBgn0036104	CG6418	84	57.335	ENSPEMG00000006755	Ddx42	66	60.353	Peromyscus_maniculatus_bairdii
FBgn0036104	CG6418	80	59.561	ENSPMAG00000005580	ddx42	81	59.135	Petromyzon_marinus
FBgn0036104	CG6418	87	56.628	ENSPCIG00000009093	DDX42	65	60.353	Phascolarctos_cinereus
FBgn0036104	CG6418	84	57.808	ENSPFOG00000014104	ddx42	66	60.714	Poecilia_formosa
FBgn0036104	CG6418	84	57.958	ENSPLAG00000010522	ddx42	66	60.841	Poecilia_latipinna
FBgn0036104	CG6418	84	57.808	ENSPMEG00000010744	ddx42	65	60.714	Poecilia_mexicana
FBgn0036104	CG6418	84	57.508	ENSPREG00000009926	ddx42	65	60.552	Poecilia_reticulata
FBgn0036104	CG6418	87	54.545	ENSPPYG00000008531	DDX42	65	58.805	Pongo_abelii
FBgn0036104	CG6418	82	52.844	ENSPCAG00000002474	DDX42	75	54.281	Procavia_capensis
FBgn0036104	CG6418	87	44.718	ENSPCOG00000001559	DDX42	83	54.899	Propithecus_coquereli
FBgn0036104	CG6418	87	56.052	ENSPVAG00000000160	DDX42	65	60.514	Pteropus_vampyrus
FBgn0036104	CG6418	72	59.754	ENSPNYG00000013954	ddx42	72	57.903	Pundamilia_nyererei
FBgn0036104	CG6418	87	56.153	ENSPNAG00000017352	ddx42	72	61.456	Pygocentrus_nattereri
FBgn0036104	CG6418	84	57.485	ENSRNOG00000009474	Ddx42	66	60.514	Rattus_norvegicus
FBgn0036104	CG6418	87	56.133	ENSRBIG00000004781	DDX42	80	62.324	Rhinopithecus_bieti
FBgn0036104	CG6418	87	56.133	ENSRROG00000029794	DDX42	68	62.324	Rhinopithecus_roxellana
FBgn0036104	CG6418	87	56.133	ENSSBOG00000029624	DDX42	78	62.324	Saimiri_boliviensis_boliviensis
FBgn0036104	CG6418	57	44.176	ENSSHAG00000007919	-	64	44.176	Sarcophilus_harrisii
FBgn0036104	CG6418	87	56.628	ENSSHAG00000012896	-	65	60.353	Sarcophilus_harrisii
FBgn0036104	CG6418	84	59.226	ENSSFOG00015014064	ddx42	66	61.874	Scleropages_formosus
FBgn0036104	CG6418	84	57.848	ENSSMAG00000009077	ddx42	74	61.812	Scophthalmus_maximus
FBgn0036104	CG6418	84	57.997	ENSSDUG00000022221	ddx42	68	60.356	Seriola_dumerili
FBgn0036104	CG6418	84	56.801	ENSSLDG00000018483	ddx42	67	58.900	Seriola_lalandi_dorsalis
FBgn0036104	CG6418	87	56.340	ENSSARG00000009847	DDX42	65	60.674	Sorex_araneus
FBgn0036104	CG6418	87	57.676	ENSSPUG00000018806	DDX42	66	61.477	Sphenodon_punctatus
FBgn0036104	CG6418	84	58.321	ENSSPAG00000013055	ddx42	67	61.165	Stegastes_partitus
FBgn0036104	CG6418	74	61.986	ENSSSCG00000017289	DDX42	69	62.411	Sus_scrofa
FBgn0036104	CG6418	87	57.880	ENSTGUG00000001931	DDX42	66	61.538	Taeniopygia_guttata
FBgn0036104	CG6418	87	56.348	ENSTRUG00000010711	ddx42	76	62.647	Takifugu_rubripes
FBgn0036104	CG6418	87	53.757	ENSTBEG00000010159	DDX42	81	57.624	Tupaia_belangeri
FBgn0036104	CG6418	84	57.186	ENSTTRG00000006962	DDX42	65	60.484	Tursiops_truncatus
FBgn0036104	CG6418	87	56.772	ENSUAMG00000007321	DDX42	65	60.514	Ursus_americanus
FBgn0036104	CG6418	87	56.628	ENSUMAG00000017438	DDX42	66	60.514	Ursus_maritimus
FBgn0036104	CG6418	65	57.225	ENSVPAG00000009633	DDX42	54	57.225	Vicugna_pacos
FBgn0036104	CG6418	87	56.052	ENSVVUG00000006095	DDX42	66	60.514	Vulpes_vulpes
FBgn0036104	CG6418	87	57.349	ENSXETG00000003245	ddx42	65	60.995	Xenopus_tropicalis
FBgn0036104	CG6418	72	61.511	ENSXCOG00000017560	ddx42	74	59.437	Xiphophorus_couchianus
FBgn0036104	CG6418	93	54.178	ENSXMAG00000008138	ddx42	68	60.714	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0004386	helicase activity	10908586.	ISS	Function
GO:0005524	ATP binding	-	IEA	Function