EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0036335 (Gene tree)
Gene ID: 39477
Gene Symbol: mRpL20
Alias: -
Full Name: mitochondrial ribosomal protein L20
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Minus strand
Length: 719 bases
Position: chr3L:13017149-13017867
Accession: FBgn0036335
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0075631	Ribosomal_L20	PF00453.18	5e-33	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0075897	-	602	-	FBpp0075631	150 (aa)	-	Q9VU36

Gene Model

Click here to download FBgn0036335's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0036335's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0036335	mRpL20	82	39.024	ENSG00000242485	MRPL20	83	39.024	Homo_sapiens
FBgn0036335	mRpL20	82	46.341	ENSAPOG00000011835	mrpl20	97	42.391	Acanthochromis_polyacanthus
FBgn0036335	mRpL20	77	37.931	ENSAMEG00000013932	MRPL20	78	37.931	Ailuropoda_melanoleuca
FBgn0036335	mRpL20	82	47.154	ENSACIG00000019179	mrpl20	83	47.154	Amphilophus_citrinellus
FBgn0036335	mRpL20	82	47.967	ENSAOCG00000007734	mrpl20	83	47.967	Amphiprion_ocellaris
FBgn0036335	mRpL20	82	47.967	ENSAPEG00000014049	mrpl20	83	47.967	Amphiprion_percula
FBgn0036335	mRpL20	82	44.715	ENSATEG00000007369	mrpl20	83	44.715	Anabas_testudineus
FBgn0036335	mRpL20	86	41.860	ENSACAG00000009143	MRPL20	86	41.860	Anolis_carolinensis
FBgn0036335	mRpL20	82	36.508	ENSANAG00000021078	-	83	36.508	Aotus_nancymaae
FBgn0036335	mRpL20	75	44.643	ENSACLG00000021726	mrpl20	72	44.643	Astatotilapia_calliptera
FBgn0036335	mRpL20	67	42.000	ENSAMXG00000035403	mrpl20	70	42.000	Astyanax_mexicanus
FBgn0036335	mRpL20	82	40.650	ENSBTAG00000004872	MRPL20	62	40.650	Bos_taurus
FBgn0036335	mRpL20	82	39.837	ENSCJAG00000039231	-	83	39.837	Callithrix_jacchus
FBgn0036335	mRpL20	82	40.650	ENSCAFG00000019259	MRPL20	83	40.650	Canis_familiaris
FBgn0036335	mRpL20	61	41.304	ENSCAFG00020025880	-	53	41.304	Canis_lupus_dingo
FBgn0036335	mRpL20	82	39.837	ENSCHIG00000010545	MRPL20	83	39.837	Capra_hircus
FBgn0036335	mRpL20	82	40.650	ENSTSYG00000033620	MRPL20	83	40.650	Carlito_syrichta
FBgn0036335	mRpL20	82	39.024	ENSCPOG00000023001	MRPL20	83	39.024	Cavia_porcellus
FBgn0036335	mRpL20	82	39.024	ENSCCAG00000032768	-	83	39.024	Cebus_capucinus
FBgn0036335	mRpL20	82	40.650	ENSCATG00000033927	MRPL20	83	40.650	Cercocebus_atys
FBgn0036335	mRpL20	71	33.962	ENSCATG00000040437	-	55	33.962	Cercocebus_atys
FBgn0036335	mRpL20	63	32.632	ENSCLAG00000011866	-	84	32.632	Chinchilla_lanigera
FBgn0036335	mRpL20	82	38.211	ENSCLAG00000009757	-	83	38.211	Chinchilla_lanigera
FBgn0036335	mRpL20	82	39.024	ENSCSAG00000019479	-	83	39.024	Chlorocebus_sabaeus
FBgn0036335	mRpL20	82	40.650	ENSCSAG00000000688	-	83	40.650	Chlorocebus_sabaeus
FBgn0036335	mRpL20	87	42.748	ENSCPBG00000022905	MRPL20	87	42.748	Chrysemys_picta_bellii
FBgn0036335	mRpL20	82	30.081	ENSCANG00000039625	MRPL20	80	30.081	Colobus_angolensis_palliatus
FBgn0036335	mRpL20	82	39.024	ENSCGRG00001024028	Mrpl20	83	39.024	Cricetulus_griseus_chok1gshd
FBgn0036335	mRpL20	82	39.024	ENSCGRG00000007447	Mrpl20	83	39.024	Cricetulus_griseus_crigri
FBgn0036335	mRpL20	86	46.512	ENSCSEG00000002016	mrpl20	75	46.512	Cynoglossus_semilaevis
FBgn0036335	mRpL20	82	43.089	ENSCVAG00000022768	mrpl20	83	43.089	Cyprinodon_variegatus
FBgn0036335	mRpL20	86	42.636	ENSDARG00000090462	mrpl20	86	42.636	Danio_rerio
FBgn0036335	mRpL20	82	41.463	ENSDNOG00000044958	MRPL20	83	41.463	Dasypus_novemcinctus
FBgn0036335	mRpL20	82	35.772	ENSETEG00000012315	MRPL20	83	35.772	Echinops_telfairi
FBgn0036335	mRpL20	85	49.219	ENSEBUG00000002214	mrpl20	86	49.219	Eptatretus_burgeri
FBgn0036335	mRpL20	82	39.837	ENSEASG00005014515	MRPL20	83	39.837	Equus_asinus_asinus
FBgn0036335	mRpL20	82	39.837	ENSECAG00000018364	MRPL20	83	39.837	Equus_caballus
FBgn0036335	mRpL20	63	34.043	ENSEEUG00000004596	-	78	34.043	Erinaceus_europaeus
FBgn0036335	mRpL20	82	43.089	ENSELUG00000013398	mrpl20	83	43.089	Esox_lucius
FBgn0036335	mRpL20	82	41.463	ENSFCAG00000033203	MRPL20	83	41.463	Felis_catus
FBgn0036335	mRpL20	82	37.398	ENSFALG00000009334	MRPL20	83	37.398	Ficedula_albicollis
FBgn0036335	mRpL20	82	39.024	ENSFDAG00000013320	MRPL20	83	39.024	Fukomys_damarensis
FBgn0036335	mRpL20	82	42.276	ENSFHEG00000004769	mrpl20	83	42.276	Fundulus_heteroclitus
FBgn0036335	mRpL20	82	44.715	ENSGMOG00000008125	mrpl20	85	44.715	Gadus_morhua
FBgn0036335	mRpL20	82	39.837	ENSGALG00000001542	MRPL20	83	39.837	Gallus_gallus
FBgn0036335	mRpL20	82	43.089	ENSGAFG00000021580	mrpl20	83	43.089	Gambusia_affinis
FBgn0036335	mRpL20	82	45.528	ENSGACG00000001134	mrpl20	83	45.528	Gasterosteus_aculeatus
FBgn0036335	mRpL20	87	41.221	ENSGAGG00000001945	MRPL20	87	41.221	Gopherus_agassizii
FBgn0036335	mRpL20	82	39.024	ENSGGOG00000027251	-	83	39.024	Gorilla_gorilla
FBgn0036335	mRpL20	82	45.528	ENSHBUG00000023626	mrpl20	83	45.528	Haplochromis_burtoni
FBgn0036335	mRpL20	82	38.211	ENSHGLG00000017538	MRPL20	83	38.211	Heterocephalus_glaber_female
FBgn0036335	mRpL20	82	38.211	ENSHGLG00100012816	MRPL20	83	38.211	Heterocephalus_glaber_male
FBgn0036335	mRpL20	82	42.276	ENSHCOG00000005830	mrpl20	91	44.792	Hippocampus_comes
FBgn0036335	mRpL20	86	44.186	ENSIPUG00000018055	mrpl20	86	44.186	Ictalurus_punctatus
FBgn0036335	mRpL20	82	39.837	ENSJJAG00000020728	Mrpl20	83	39.837	Jaculus_jaculus
FBgn0036335	mRpL20	82	43.089	ENSKMAG00000021650	mrpl20	83	43.089	Kryptolebias_marmoratus
FBgn0036335	mRpL20	82	47.154	ENSLBEG00000021562	mrpl20	83	47.154	Labrus_bergylta
FBgn0036335	mRpL20	82	39.837	ENSLACG00000019149	MRPL20	83	39.837	Latimeria_chalumnae
FBgn0036335	mRpL20	82	41.463	ENSLAFG00000010706	MRPL20	83	41.463	Loxodonta_africana
FBgn0036335	mRpL20	82	40.650	ENSMFAG00000043214	MRPL20	83	40.650	Macaca_fascicularis
FBgn0036335	mRpL20	76	32.456	ENSMFAG00000046195	-	67	32.456	Macaca_fascicularis
FBgn0036335	mRpL20	77	34.959	ENSMMUG00000038877	MRPL20	85	34.959	Macaca_mulatta
FBgn0036335	mRpL20	82	40.650	ENSMNEG00000041891	MRPL20	83	40.650	Macaca_nemestrina
FBgn0036335	mRpL20	76	32.456	ENSMNEG00000000027	-	58	32.456	Macaca_nemestrina
FBgn0036335	mRpL20	63	41.489	ENSMLEG00000037086	MRPL20	78	41.489	Mandrillus_leucophaeus
FBgn0036335	mRpL20	71	33.019	ENSMLEG00000037605	-	65	33.019	Mandrillus_leucophaeus
FBgn0036335	mRpL20	82	45.528	ENSMAMG00000023884	mrpl20	83	45.528	Mastacembelus_armatus
FBgn0036335	mRpL20	82	45.528	ENSMZEG00005011376	mrpl20	83	45.528	Maylandia_zebra
FBgn0036335	mRpL20	75	34.821	ENSMGAG00000002774	MRPL20	76	34.821	Meleagris_gallopavo
FBgn0036335	mRpL20	82	39.024	ENSMAUG00000013299	Mrpl20	83	39.024	Mesocricetus_auratus
FBgn0036335	mRpL20	82	39.837	ENSMICG00000041892	MRPL20	83	39.837	Microcebus_murinus
FBgn0036335	mRpL20	82	38.211	ENSMOCG00000009545	-	83	38.211	Microtus_ochrogaster
FBgn0036335	mRpL20	82	39.837	ENSMOCG00000000404	-	83	39.837	Microtus_ochrogaster
FBgn0036335	mRpL20	82	38.211	ENSMODG00000006562	MRPL20	83	38.211	Monodelphis_domestica
FBgn0036335	mRpL20	82	47.154	ENSMALG00000018593	mrpl20	83	47.154	Monopterus_albus
FBgn0036335	mRpL20	82	39.837	MGP_CAROLIEiJ_G0026904	Mrpl20	90	39.535	Mus_caroli
FBgn0036335	mRpL20	82	39.837	ENSMUSG00000029066	Mrpl20	90	39.535	Mus_musculus
FBgn0036335	mRpL20	82	39.024	MGP_PahariEiJ_G0029252	Mrpl20	83	39.024	Mus_pahari
FBgn0036335	mRpL20	82	39.837	MGP_SPRETEiJ_G0027898	Mrpl20	90	39.535	Mus_spretus
FBgn0036335	mRpL20	82	39.024	ENSMLUG00000011857	MRPL20	83	39.024	Myotis_lucifugus
FBgn0036335	mRpL20	82	39.024	ENSNGAG00000021688	Mrpl20	91	38.372	Nannospalax_galili
FBgn0036335	mRpL20	82	45.528	ENSNBRG00000006018	mrpl20	83	45.528	Neolamprologus_brichardi
FBgn0036335	mRpL20	82	38.211	ENSODEG00000010734	MRPL20	83	38.211	Octodon_degus
FBgn0036335	mRpL20	82	46.341	ENSONIG00000018914	mrpl20	83	46.341	Oreochromis_niloticus
FBgn0036335	mRpL20	82	47.967	ENSORLG00000018304	mrpl20	83	47.967	Oryzias_latipes
FBgn0036335	mRpL20	82	47.967	ENSORLG00020009128	mrpl20	83	47.967	Oryzias_latipes_hni
FBgn0036335	mRpL20	82	47.967	ENSORLG00015005156	mrpl20	83	47.967	Oryzias_latipes_hsok
FBgn0036335	mRpL20	82	47.967	ENSOMEG00000015654	mrpl20	83	47.967	Oryzias_melastigma
FBgn0036335	mRpL20	82	41.463	ENSOGAG00000005968	MRPL20	83	41.463	Otolemur_garnettii
FBgn0036335	mRpL20	82	39.837	ENSOARG00000003529	MRPL20	83	39.837	Ovis_aries
FBgn0036335	mRpL20	82	39.024	ENSPPAG00000042350	-	83	39.024	Pan_paniscus
FBgn0036335	mRpL20	82	42.276	ENSPPRG00000009188	MRPL20	83	42.276	Panthera_pardus
FBgn0036335	mRpL20	82	39.024	ENSPTRG00000000029	MRPL20	83	39.024	Pan_troglodytes
FBgn0036335	mRpL20	76	33.333	ENSPANG00000036197	-	81	33.333	Papio_anubis
FBgn0036335	mRpL20	82	40.650	ENSPANG00000015802	MRPL20	83	40.650	Papio_anubis
FBgn0036335	mRpL20	82	39.024	ENSPKIG00000002248	mrpl20	83	39.024	Paramormyrops_kingsleyae
FBgn0036335	mRpL20	65	38.776	ENSPSIG00000003939	MRPL20	69	38.776	Pelodiscus_sinensis
FBgn0036335	mRpL20	82	46.341	ENSPMGG00000003966	mrpl20	83	46.341	Periophthalmus_magnuspinnatus
FBgn0036335	mRpL20	82	34.677	ENSPEMG00000009458	-	68	34.677	Peromyscus_maniculatus_bairdii
FBgn0036335	mRpL20	85	33.858	ENSPMAG00000009990	-	98	35.200	Petromyzon_marinus
FBgn0036335	mRpL20	82	39.837	ENSPCIG00000007747	MRPL20	83	39.837	Phascolarctos_cinereus
FBgn0036335	mRpL20	82	43.089	ENSPFOG00000018163	mrpl20	83	43.089	Poecilia_formosa
FBgn0036335	mRpL20	82	43.089	ENSPLAG00000016451	mrpl20	83	43.089	Poecilia_latipinna
FBgn0036335	mRpL20	82	43.089	ENSPMEG00000002561	mrpl20	83	43.089	Poecilia_mexicana
FBgn0036335	mRpL20	82	40.323	ENSPREG00000004925	mrpl20	83	40.323	Poecilia_reticulata
FBgn0036335	mRpL20	82	39.837	ENSPCAG00000001425	MRPL20	83	39.837	Procavia_capensis
FBgn0036335	mRpL20	82	35.772	ENSPCOG00000004450	-	81	35.772	Propithecus_coquereli
FBgn0036335	mRpL20	82	40.650	ENSPCOG00000025653	-	83	40.650	Propithecus_coquereli
FBgn0036335	mRpL20	82	45.528	ENSPNYG00000008626	mrpl20	83	45.528	Pundamilia_nyererei
FBgn0036335	mRpL20	86	41.860	ENSPNAG00000016694	mrpl20	86	41.860	Pygocentrus_nattereri
FBgn0036335	mRpL20	82	39.024	ENSRNOG00000018647	Mrpl20	83	39.024	Rattus_norvegicus
FBgn0036335	mRpL20	82	39.837	ENSRBIG00000042278	MRPL20	83	39.837	Rhinopithecus_bieti
FBgn0036335	mRpL20	82	39.837	ENSRROG00000003574	MRPL20	83	39.837	Rhinopithecus_roxellana
FBgn0036335	mRpL20	89	35.915	ENSSHAG00000008197	MRPL20	92	35.915	Sarcophilus_harrisii
FBgn0036335	mRpL20	87	41.985	ENSSFOG00015016009	mrpl20	87	41.985	Scleropages_formosus
FBgn0036335	mRpL20	82	44.715	ENSSMAG00000000214	mrpl20	83	44.715	Scophthalmus_maximus
FBgn0036335	mRpL20	82	45.528	ENSSDUG00000008646	mrpl20	83	45.528	Seriola_dumerili
FBgn0036335	mRpL20	82	44.715	ENSSLDG00000023171	mrpl20	83	44.715	Seriola_lalandi_dorsalis
FBgn0036335	mRpL20	82	43.902	ENSSPUG00000016911	MRPL20	83	43.902	Sphenodon_punctatus
FBgn0036335	mRpL20	82	45.528	ENSSPAG00000012887	mrpl20	83	45.528	Stegastes_partitus
FBgn0036335	mRpL20	82	40.650	ENSSSCG00000033374	MRPL20	83	40.650	Sus_scrofa
FBgn0036335	mRpL20	63	35.106	ENSTGUG00000003113	MRPL20	76	35.106	Taeniopygia_guttata
FBgn0036335	mRpL20	82	42.276	ENSTRUG00000021410	mrpl20	83	42.276	Takifugu_rubripes
FBgn0036335	mRpL20	82	43.902	ENSTNIG00000014657	mrpl20	83	43.902	Tetraodon_nigroviridis
FBgn0036335	mRpL20	82	41.463	ENSTBEG00000008735	MRPL20	83	41.463	Tupaia_belangeri
FBgn0036335	mRpL20	63	38.298	ENSTTRG00000017046	MRPL20	78	38.298	Tursiops_truncatus
FBgn0036335	mRpL20	65	34.694	ENSUAMG00000028406	-	70	34.694	Ursus_americanus
FBgn0036335	mRpL20	82	40.650	ENSUAMG00000012829	-	89	40.698	Ursus_americanus
FBgn0036335	mRpL20	65	33.673	ENSUMAG00000003240	-	70	33.673	Ursus_maritimus
FBgn0036335	mRpL20	56	36.047	ENSUMAG00000001917	-	70	36.047	Ursus_maritimus
FBgn0036335	mRpL20	82	40.650	ENSVVUG00000004455	MRPL20	83	40.650	Vulpes_vulpes
FBgn0036335	mRpL20	82	41.463	ENSXETG00000011118	mrpl20	83	41.463	Xenopus_tropicalis
FBgn0036335	mRpL20	82	43.902	ENSXCOG00000004220	mrpl20	83	43.902	Xiphophorus_couchianus
FBgn0036335	mRpL20	82	43.902	ENSXMAG00000016652	mrpl20	83	43.902	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000027	ribosomal large subunit assembly	21873635.	IBA	Process
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	11279069.	ISS	Function
GO:0003735	structural constituent of ribosome	17927810.	TAS	Function
GO:0005761	mitochondrial ribosome	21873635.	IBA	Component
GO:0005762	mitochondrial large ribosomal subunit	11279069.	ISS	Component
GO:0005762	mitochondrial large ribosomal subunit	17927810.	TAS	Component
GO:0006412	translation	11279069.	ISS	Process
GO:0019843	rRNA binding	-	IEA	Function
GO:0032543	mitochondrial translation	17927810.	TAS	Process