EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0036386 (Gene tree)
Gene ID: 39535
Gene Symbol: CG8833
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 3119 bases
Position: chr3L:13925882-13929000
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0075534	DUF1604	PF07713.13	2.8e-35	1	1
FBpp0075534	G-patch	PF01585.23	4.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0075792	-	3002	-	FBpp0075534	952 (aa)	-	Q9VUA0

Gene Model

Click here to download FBgn0036386's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0036386's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0036386	CG8833	67	34.055	ENSAMEG00000015575	GPATCH1	96	30.878	Ailuropoda_melanoleuca
FBgn0036386	CG8833	63	50.273	ENSAOCG00000006668	gpatch1	64	50.273	Amphiprion_ocellaris
FBgn0036386	CG8833	67	32.511	ENSAPEG00000000026	gpatch1	81	30.988	Amphiprion_percula
FBgn0036386	CG8833	67	32.853	ENSATEG00000014494	gpatch1	68	33.333	Anabas_testudineus
FBgn0036386	CG8833	67	34.097	ENSANAG00000027002	GPATCH1	82	31.547	Aotus_nancymaae
FBgn0036386	CG8833	66	33.521	ENSAMXG00000020177	gpatch1	73	32.676	Astyanax_mexicanus
FBgn0036386	CG8833	67	33.381	ENSBTAG00000000721	GPATCH1	69	33.003	Bos_taurus
FBgn0036386	CG8833	67	33.862	ENSCJAG00000000684	GPATCH1	82	31.624	Callithrix_jacchus
FBgn0036386	CG8833	67	32.910	ENSCAFG00000007457	GPATCH1	69	32.396	Canis_familiaris
FBgn0036386	CG8833	67	33.621	ENSCAFG00020019731	GPATCH1	82	32.396	Canis_lupus_dingo
FBgn0036386	CG8833	67	33.906	ENSCHIG00000019626	GPATCH1	72	33.619	Capra_hircus
FBgn0036386	CG8833	64	33.184	ENSCAPG00000008827	GPATCH1	69	32.838	Cavia_aperea
FBgn0036386	CG8833	66	33.526	ENSCPOG00000024477	GPATCH1	82	32.317	Cavia_porcellus
FBgn0036386	CG8833	67	33.819	ENSCCAG00000024676	GPATCH1	82	31.380	Cebus_capucinus
FBgn0036386	CG8833	79	30.976	ENSCLAG00000003395	-	70	33.234	Chinchilla_lanigera
FBgn0036386	CG8833	67	32.948	ENSCSAG00000004743	GPATCH1	69	33.141	Chlorocebus_sabaeus
FBgn0036386	CG8833	55	40.336	ENSCHOG00000012865	GPATCH1	60	40.336	Choloepus_hoffmanni
FBgn0036386	CG8833	64	34.551	ENSCPBG00000000666	GPATCH1	93	32.634	Chrysemys_picta_bellii
FBgn0036386	CG8833	50	48.466	ENSCGRG00000005069	Gpatch1	57	48.466	Cricetulus_griseus_crigri
FBgn0036386	CG8833	68	32.999	ENSDARG00000033418	gpatch1	96	30.200	Danio_rerio
FBgn0036386	CG8833	68	33.848	ENSDNOG00000005291	GPATCH1	86	32.182	Dasypus_novemcinctus
FBgn0036386	CG8833	67	33.235	ENSDORG00000012546	Gpatch1	53	44.012	Dipodomys_ordii
FBgn0036386	CG8833	68	33.003	ENSETEG00000003626	GPATCH1	71	32.068	Echinops_telfairi
FBgn0036386	CG8833	67	33.714	ENSEASG00005021162	GPATCH1	95	30.884	Equus_asinus_asinus
FBgn0036386	CG8833	67	33.429	ENSECAG00000022743	GPATCH1	67	33.429	Equus_caballus
FBgn0036386	CG8833	67	33.573	ENSFCAG00000014917	GPATCH1	69	33.871	Felis_catus
FBgn0036386	CG8833	66	35.303	ENSFALG00000007821	GPATCH1	82	32.843	Ficedula_albicollis
FBgn0036386	CG8833	60	33.260	ENSGMOG00000003830	gpatch1	75	33.787	Gadus_morhua
FBgn0036386	CG8833	67	35.286	ENSGALG00000004839	GPATCH1	91	32.757	Gallus_gallus
FBgn0036386	CG8833	67	32.946	ENSGACG00000017544	gpatch1	72	32.751	Gasterosteus_aculeatus
FBgn0036386	CG8833	66	34.311	ENSGAGG00000010067	GPATCH1	82	31.250	Gopherus_agassizii
FBgn0036386	CG8833	67	33.719	ENSHGLG00000009334	GPATCH1	83	31.934	Heterocephalus_glaber_female
FBgn0036386	CG8833	67	33.575	ENSHGLG00100018074	GPATCH1	82	32.143	Heterocephalus_glaber_male
FBgn0036386	CG8833	72	33.244	ENSJJAG00000023765	Gpatch1	82	32.187	Jaculus_jaculus
FBgn0036386	CG8833	67	33.669	ENSKMAG00000017950	gpatch1	69	33.142	Kryptolebias_marmoratus
FBgn0036386	CG8833	67	31.171	ENSLBEG00000026527	gpatch1	68	31.837	Labrus_bergylta
FBgn0036386	CG8833	64	34.598	ENSLACG00000008130	GPATCH1	81	33.546	Latimeria_chalumnae
FBgn0036386	CG8833	67	33.141	ENSLOCG00000001800	gpatch1	82	30.451	Lepisosteus_oculatus
FBgn0036386	CG8833	67	33.668	ENSLAFG00000013589	GPATCH1	74	33.524	Loxodonta_africana
FBgn0036386	CG8833	67	33.766	ENSMFAG00000034418	GPATCH1	73	58.333	Macaca_fascicularis
FBgn0036386	CG8833	67	33.911	ENSMMUG00000011790	GPATCH1	73	59.375	Macaca_mulatta
FBgn0036386	CG8833	67	32.370	ENSMZEG00005001926	gpatch1	85	30.058	Maylandia_zebra
FBgn0036386	CG8833	67	35.447	ENSMGAG00000005775	GPATCH1	85	33.092	Meleagris_gallopavo
FBgn0036386	CG8833	67	35.581	ENSMOCG00000000174	Gpatch1	70	34.488	Microtus_ochrogaster
FBgn0036386	CG8833	67	31.711	ENSMMOG00000002140	gpatch1	72	30.973	Mola_mola
FBgn0036386	CG8833	67	32.413	ENSMALG00000014386	gpatch1	69	32.751	Monopterus_albus
FBgn0036386	CG8833	67	33.866	ENSMUSG00000063808	Gpatch1	94	58.511	Mus_musculus
FBgn0036386	CG8833	67	33.866	MGP_PahariEiJ_G0012816	Gpatch1	94	58.511	Mus_pahari
FBgn0036386	CG8833	67	33.866	MGP_SPRETEiJ_G0030681	Gpatch1	94	58.511	Mus_spretus
FBgn0036386	CG8833	67	33.997	ENSMPUG00000007658	GPATCH1	69	33.096	Mustela_putorius_furo
FBgn0036386	CG8833	67	33.624	ENSNLEG00000007659	GPATCH1	73	59.375	Nomascus_leucogenys
FBgn0036386	CG8833	67	32.225	ENSONIG00000003302	gpatch1	73	32.123	Oreochromis_niloticus
FBgn0036386	CG8833	67	33.431	ENSOANG00000012732	GPATCH1	71	32.761	Ornithorhynchus_anatinus
FBgn0036386	CG8833	67	32.221	ENSOMEG00000022688	gpatch1	60	38.117	Oryzias_melastigma
FBgn0036386	CG8833	67	32.956	ENSOGAG00000004016	GPATCH1	82	33.145	Otolemur_garnettii
FBgn0036386	CG8833	66	33.859	ENSOARG00000004365	GPATCH1	82	32.195	Ovis_aries
FBgn0036386	CG8833	67	34.457	ENSPPRG00000017245	GPATCH1	69	34.012	Panthera_pardus
FBgn0036386	CG8833	67	34.543	ENSPTIG00000019649	GPATCH1	69	34.253	Panthera_tigris_altaica
FBgn0036386	CG8833	67	33.766	ENSPANG00000012374	GPATCH1	73	58.333	Papio_anubis
FBgn0036386	CG8833	66	32.216	ENSPKIG00000020745	gpatch1	65	32.897	Paramormyrops_kingsleyae
FBgn0036386	CG8833	66	34.593	ENSPSIG00000013433	GPATCH1	90	31.607	Pelodiscus_sinensis
FBgn0036386	CG8833	67	34.343	ENSPEMG00000000636	Gpatch1	69	34.052	Peromyscus_maniculatus_bairdii
FBgn0036386	CG8833	67	33.663	ENSPCIG00000021003	GPATCH1	86	31.356	Phascolarctos_cinereus
FBgn0036386	CG8833	67	32.148	ENSPREG00000008264	gpatch1	79	32.000	Poecilia_reticulata
FBgn0036386	CG8833	67	33.830	ENSPPYG00000009824	GPATCH1	82	32.214	Pongo_abelii
FBgn0036386	CG8833	64	33.772	ENSPCOG00000009674	GPATCH1	75	33.480	Propithecus_coquereli
FBgn0036386	CG8833	67	31.387	ENSPVAG00000017767	GPATCH1	69	31.025	Pteropus_vampyrus
FBgn0036386	CG8833	68	32.615	ENSPNYG00000018189	gpatch1	87	31.159	Pundamilia_nyererei
FBgn0036386	CG8833	71	32.530	ENSPNAG00000013187	gpatch1	71	32.558	Pygocentrus_nattereri
FBgn0036386	CG8833	67	34.006	ENSSBOG00000034650	GPATCH1	82	31.829	Saimiri_boliviensis_boliviensis
FBgn0036386	CG8833	67	32.961	ENSSHAG00000016016	GPATCH1	82	31.710	Sarcophilus_harrisii
FBgn0036386	CG8833	67	33.000	ENSSFOG00015011535	gpatch1	81	32.382	Scleropages_formosus
FBgn0036386	CG8833	67	31.208	ENSSMAG00000002883	gpatch1	81	31.235	Scophthalmus_maximus
FBgn0036386	CG8833	69	32.609	ENSSLDG00000002856	gpatch1	90	30.778	Seriola_lalandi_dorsalis
FBgn0036386	CG8833	67	34.003	ENSSARG00000004108	GPATCH1	69	33.716	Sorex_araneus
FBgn0036386	CG8833	67	33.623	ENSSSCG00000002865	GPATCH1	85	32.321	Sus_scrofa
FBgn0036386	CG8833	67	34.659	ENSTGUG00000009401	GPATCH1	92	32.031	Taeniopygia_guttata
FBgn0036386	CG8833	67	33.382	ENSTRUG00000025081	gpatch1	84	31.592	Takifugu_rubripes
FBgn0036386	CG8833	67	33.285	ENSTRUG00000005785	-	84	31.592	Takifugu_rubripes
FBgn0036386	CG8833	68	31.655	ENSTNIG00000002554	gpatch1	97	30.504	Tetraodon_nigroviridis
FBgn0036386	CG8833	67	33.528	ENSUMAG00000014645	GPATCH1	74	57.447	Ursus_maritimus
FBgn0036386	CG8833	54	49.714	ENSVPAG00000010313	GPATCH1	62	49.180	Vicugna_pacos
FBgn0036386	CG8833	67	33.477	ENSVVUG00000016572	GPATCH1	82	32.274	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	18981222.	IC	Process
GO:0003674	molecular_function	-	ND	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0071011	precatalytic spliceosome	18981222.	HDA	Component
GO:0071013	catalytic step 2 spliceosome	18981222.	HDA	Component