EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0036405 (Gene tree)
Gene ID: 39559
Gene Symbol: CG6833
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 1264 bases
Position: chr3L:14051206-14052469
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0075516	RNase_T	PF00929.24	7.5e-17	1	1
FBpp0291625	RNase_T	PF00929.24	7.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0302433	-	1187	-	FBpp0291625	290 (aa)	-	Q9VUC3
FBtr0075774	-	1264	-	FBpp0075516	290 (aa)	-	Q9VUC3

Gene Model

Click here to download FBgn0036405's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0036405's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0036405	CG6833	58	54.762	ENSAPLG00000005865	REXO4	51	54.762	Anas_platyrhynchos
FBgn0036405	CG6833	56	56.173	ENSCING00000010751	-	63	56.173	Ciona_intestinalis
FBgn0036405	CG6833	69	47.525	ENSDARG00000088619	rexo4	63	51.765	Danio_rerio
FBgn0036405	CG6833	59	52.941	ENSEEUG00000012135	-	52	52.941	Erinaceus_europaeus
FBgn0036405	CG6833	59	48.235	ENSFCAG00000011652	REXO4	50	44.954	Felis_catus
FBgn0036405	CG6833	59	40.588	ENSGMOG00000012876	rexo4	51	40.588	Gadus_morhua
FBgn0036405	CG6833	58	53.571	ENSGALG00000030609	REXO4	97	53.571	Gallus_gallus
FBgn0036405	CG6833	79	43.913	ENSMZEG00005012336	rexo4	53	48.404	Maylandia_zebra
FBgn0036405	CG6833	62	46.927	YOL080C	-	62	46.927	Saccharomyces_cerevisiae
FBgn0036405	CG6833	72	48.113	ENSSFOG00015017394	rexo4	51	50.521	Scleropages_formosus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0006364	rRNA processing	-	IEA	Process
GO:0008408	3'-5' exonuclease activity	-	IEA	Function