EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0036450 (Gene tree)
Gene ID: 39612
Gene Symbol: Tdrd3
Alias: -
Full Name: Tudor domain containing 3
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 2875 bases
Position: chr3L:14786791-14789665
Accession: FBgn0036450
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0075441	SMN	PF06003.12	6.6e-09	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0075691	-	2644	-	FBpp0075441	836 (aa)	-	Q9VUH8

Gene Model

Click here to download FBgn0036450's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0036450's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0036450	Tdrd3	56	35.638	ENSACAG00000004923	TDRD3	63	37.255	Anolis_carolinensis
FBgn0036450	Tdrd3	53	36.657	ENSBTAG00000009308	TDRD3	57	48.214	Bos_taurus
FBgn0036450	Tdrd3	52	34.513	ENSCAFG00000023746	-	56	48.214	Canis_familiaris
FBgn0036450	Tdrd3	52	34.513	ENSCAFG00020018076	-	56	48.214	Canis_lupus_dingo
FBgn0036450	Tdrd3	53	34.392	ENSCHIG00000020019	TDRD3	57	46.429	Capra_hircus
FBgn0036450	Tdrd3	51	34.615	ENSTSYG00000002254	TDRD3	57	48.214	Carlito_syrichta
FBgn0036450	Tdrd3	52	35.398	ENSCAPG00000012313	TDRD3	50	50.000	Cavia_aperea
FBgn0036450	Tdrd3	52	35.398	ENSCPOG00000010437	TDRD3	54	50.000	Cavia_porcellus
FBgn0036450	Tdrd3	53	35.398	ENSCCAG00000023831	TDRD3	57	50.000	Cebus_capucinus
FBgn0036450	Tdrd3	53	35.398	ENSCATG00000029498	TDRD3	59	50.000	Cercocebus_atys
FBgn0036450	Tdrd3	52	35.398	ENSCLAG00000002654	TDRD3	57	50.000	Chinchilla_lanigera
FBgn0036450	Tdrd3	53	35.398	ENSCANG00000034303	TDRD3	57	50.000	Colobus_angolensis_palliatus
FBgn0036450	Tdrd3	54	34.545	ENSCSEG00000000670	tdrd3	59	50.000	Cynoglossus_semilaevis
FBgn0036450	Tdrd3	52	34.959	ENSDNOG00000002011	TDRD3	56	48.214	Dasypus_novemcinctus
FBgn0036450	Tdrd3	53	34.513	ENSDORG00000008714	Tdrd3	57	48.214	Dipodomys_ordii
FBgn0036450	Tdrd3	53	34.656	ENSEASG00005015575	TDRD3	57	48.214	Equus_asinus_asinus
FBgn0036450	Tdrd3	53	34.513	ENSECAG00000000550	TDRD3	57	48.214	Equus_caballus
FBgn0036450	Tdrd3	53	33.862	ENSFCAG00000022126	TDRD3	57	46.429	Felis_catus
FBgn0036450	Tdrd3	52	34.513	ENSFDAG00000011552	TDRD3	57	48.214	Fukomys_damarensis
FBgn0036450	Tdrd3	53	35.398	ENSHGLG00000018707	-	57	50.000	Heterocephalus_glaber_female
FBgn0036450	Tdrd3	50	49.057	ENSIPUG00000012320	tdrd3	57	46.552	Ictalurus_punctatus
FBgn0036450	Tdrd3	53	33.636	ENSLOCG00000004652	tdrd3	58	49.057	Lepisosteus_oculatus
FBgn0036450	Tdrd3	53	35.185	ENSMFAG00000007606	TDRD3	57	48.214	Macaca_fascicularis
FBgn0036450	Tdrd3	52	35.200	ENSMMUG00000007169	TDRD3	57	48.214	Macaca_mulatta
FBgn0036450	Tdrd3	53	35.185	ENSMNEG00000002038	TDRD3	57	48.214	Macaca_nemestrina
FBgn0036450	Tdrd3	50	36.047	ENSMGAG00000014961	TDRD3	61	36.047	Meleagris_gallopavo
FBgn0036450	Tdrd3	53	35.398	ENSMICG00000009982	TDRD3	57	50.000	Microcebus_murinus
FBgn0036450	Tdrd3	52	35.398	ENSODEG00000000576	-	57	50.000	Octodon_degus
FBgn0036450	Tdrd3	52	35.135	ENSOGAG00000005898	TDRD3	57	50.000	Otolemur_garnettii
FBgn0036450	Tdrd3	53	35.398	ENSPANG00000019138	TDRD3	57	50.000	Papio_anubis
FBgn0036450	Tdrd3	52	36.508	ENSPCIG00000011476	-	59	51.852	Phascolarctos_cinereus
FBgn0036450	Tdrd3	51	36.036	ENSSHAG00000011994	TDRD3	57	51.852	Sarcophilus_harrisii
FBgn0036450	Tdrd3	51	50.943	ENSSFOG00015005175	tdrd3	60	50.943	Scleropages_formosus
FBgn0036450	Tdrd3	52	34.667	ENSSSCG00000009449	TDRD3	57	48.214	Sus_scrofa
FBgn0036450	Tdrd3	57	32.308	ENSTNIG00000005230	tdrd3	64	37.374	Tetraodon_nigroviridis
FBgn0036450	Tdrd3	52	34.513	ENSVVUG00000029140	TDRD3	59	48.214	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0006397	mRNA processing	-	IEA	Process