EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0036486 (Gene tree)
Gene ID: 39654
Gene Symbol: Msh6
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 4330
Position: chr3L: 15154233-15158562
Accession
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0075646	-	4080	-	FBpp0075399	1190 (aa)	-	Q9VUM0

Gene Model

Click here to download FBgn0036486's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0036486's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0036486	Msh6	91	43.594	ENSG00000116062	MSH6	99	46.201	Homo_sapiens
FBgn0036486	Msh6	89	44.283	ENSMUSG00000005370	Msh6	80	44.203	Mus_musculus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000400	four-way junction DNA binding	21873635.	IBA	Function
GO:0000710	meiotic mismatch repair	21873635.	IBA	Process
GO:0000710	meiotic mismatch repair	17339220.	IMP	Process
GO:0003684	damaged DNA binding	21873635.	IBA	Function
GO:0005524	ATP binding	21873635.	IBA	Function
GO:0006281	DNA repair	10908583.	ISS	Process
GO:0006290	pyrimidine dimer repair	21873635.	IBA	Process
GO:0006298	mismatch repair	21873635.	IBA	Process
GO:0007095	mitotic G2 DNA damage checkpoint	21873635.	IBA	Process
GO:0008094	DNA-dependent ATPase activity	21873635.	IBA	Function
GO:0008630	intrinsic apoptotic signaling pathway in response to DNA damage	21873635.	IBA	Process
GO:0009411	response to UV	21873635.	IBA	Process
GO:0032137	guanine/thymine mispair binding	21873635.	IBA	Function
GO:0032143	single thymine insertion binding	21873635.	IBA	Function
GO:0032300	mismatch repair complex	21873635.	IBA	Component
GO:0032301	MutSalpha complex	21873635.	IBA	Component
GO:0032405	MutLalpha complex binding	21873635.	IBA	Function
GO:0032876	negative regulation of DNA endoreduplication	21873635.	IBA	Process
GO:0035064	methylated histone binding	21873635.	IBA	Function
GO:0036297	interstrand cross-link repair	21873635.	IBA	Process
GO:0043111	replication fork arrest	21873635.	IBA	Process
GO:0043531	ADP binding	21873635.	IBA	Function
GO:0043570	maintenance of DNA repeat elements	21873635.	IBA	Process
GO:0045910	negative regulation of DNA recombination	21873635.	IBA	Process
GO:0051096	positive regulation of helicase activity	21873635.	IBA	Process