EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0036500 (Gene tree)
Gene ID: 39669
Gene Symbol: CG7275
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 1603 bases
Position: chr3L:15498959-15500561
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0075302	Sof1	PF04158.14	2.3e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0075547	-	1495	-	FBpp0075302	446 (aa)	-	E5KYS9

Gene Model

Click here to download FBgn0036500's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0036500's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0036500	CG7275	98	58.486	ENSG00000164934	DCAF13	100	68.750	Homo_sapiens
FBgn0036500	CG7275	99	59.955	ENSAPOG00000000524	dcaf13	99	59.955	Acanthochromis_polyacanthus
FBgn0036500	CG7275	99	57.919	ENSAMEG00000001595	DCAF13	98	57.919	Ailuropoda_melanoleuca
FBgn0036500	CG7275	99	59.955	ENSACIG00000003110	dcaf13	98	59.955	Amphilophus_citrinellus
FBgn0036500	CG7275	99	60.633	ENSAOCG00000011982	dcaf13	99	60.633	Amphiprion_ocellaris
FBgn0036500	CG7275	94	56.132	ENSAPEG00000021156	dcaf13	94	56.132	Amphiprion_percula
FBgn0036500	CG7275	99	60.860	ENSATEG00000024751	dcaf13	99	60.860	Anabas_testudineus
FBgn0036500	CG7275	99	55.982	ENSAPLG00000002811	DCAF13	99	55.982	Anas_platyrhynchos
FBgn0036500	CG7275	99	59.050	ENSACAG00000009465	DCAF13	99	59.050	Anolis_carolinensis
FBgn0036500	CG7275	99	47.738	ENSANAG00000023472	-	99	47.738	Aotus_nancymaae
FBgn0036500	CG7275	99	59.276	ENSANAG00000020798	DCAF13	99	59.276	Aotus_nancymaae
FBgn0036500	CG7275	99	61.086	ENSACLG00000025212	dcaf13	89	61.086	Astatotilapia_calliptera
FBgn0036500	CG7275	99	59.050	ENSAMXG00000037008	dcaf13	99	59.050	Astyanax_mexicanus
FBgn0036500	CG7275	98	58.257	ENSBTAG00000021449	DCAF13	99	58.597	Bos_taurus
FBgn0036500	CG7275	92	48.184	WBGene00022742	ZK430.7	92	48.184	Caenorhabditis_elegans
FBgn0036500	CG7275	98	59.174	ENSCJAG00000016181	DCAF13	99	59.502	Callithrix_jacchus
FBgn0036500	CG7275	99	59.050	ENSCAFG00000000663	DCAF13	99	59.050	Canis_familiaris
FBgn0036500	CG7275	99	59.050	ENSCAFG00020003044	DCAF13	99	59.050	Canis_lupus_dingo
FBgn0036500	CG7275	99	58.597	ENSCHIG00000020556	DCAF13	99	58.597	Capra_hircus
FBgn0036500	CG7275	99	58.597	ENSTSYG00000003307	DCAF13	99	58.597	Carlito_syrichta
FBgn0036500	CG7275	95	55.294	ENSCAPG00000007305	DCAF13	99	54.306	Cavia_aperea
FBgn0036500	CG7275	99	59.955	ENSCPOG00000012291	DCAF13	99	59.955	Cavia_porcellus
FBgn0036500	CG7275	99	58.597	ENSCCAG00000033103	DCAF13	76	58.597	Cebus_capucinus
FBgn0036500	CG7275	99	59.502	ENSCATG00000032160	DCAF13	84	59.502	Cercocebus_atys
FBgn0036500	CG7275	99	44.170	ENSCATG00000037371	-	95	44.170	Cercocebus_atys
FBgn0036500	CG7275	99	59.729	ENSCLAG00000006565	DCAF13	99	59.729	Chinchilla_lanigera
FBgn0036500	CG7275	99	59.502	ENSCSAG00000011887	DCAF13	99	59.502	Chlorocebus_sabaeus
FBgn0036500	CG7275	71	45.886	ENSCHOG00000003007	-	73	45.886	Choloepus_hoffmanni
FBgn0036500	CG7275	99	58.371	ENSCPBG00000026050	DCAF13	99	58.371	Chrysemys_picta_bellii
FBgn0036500	CG7275	99	55.530	ENSCING00000005282	-	99	55.530	Ciona_intestinalis
FBgn0036500	CG7275	99	55.079	ENSCSAVG00000006538	-	99	55.079	Ciona_savignyi
FBgn0036500	CG7275	99	53.047	ENSCANG00000043032	DCAF13	75	53.047	Colobus_angolensis_palliatus
FBgn0036500	CG7275	99	42.986	ENSCANG00000038828	-	95	42.986	Colobus_angolensis_palliatus
FBgn0036500	CG7275	99	59.276	ENSCGRG00001023256	Dcaf13	99	59.276	Cricetulus_griseus_chok1gshd
FBgn0036500	CG7275	94	58.571	ENSCGRG00000004862	Dcaf13	91	58.571	Cricetulus_griseus_crigri
FBgn0036500	CG7275	99	61.086	ENSCSEG00000013595	dcaf13	99	61.086	Cynoglossus_semilaevis
FBgn0036500	CG7275	99	52.036	ENSCVAG00000010337	dcaf13	99	52.036	Cyprinodon_variegatus
FBgn0036500	CG7275	99	59.594	ENSDARG00000002267	dcaf13	99	59.594	Danio_rerio
FBgn0036500	CG7275	81	58.564	ENSDNOG00000044885	DCAF13	95	58.564	Dasypus_novemcinctus
FBgn0036500	CG7275	99	56.109	ENSDORG00000011873	Dcaf13	99	56.109	Dipodomys_ordii
FBgn0036500	CG7275	99	55.405	ENSETEG00000004777	DCAF13	77	55.405	Echinops_telfairi
FBgn0036500	CG7275	99	51.236	ENSEBUG00000008116	dcaf13	99	51.236	Eptatretus_burgeri
FBgn0036500	CG7275	99	58.824	ENSEASG00005001266	DCAF13	99	58.824	Equus_asinus_asinus
FBgn0036500	CG7275	99	58.824	ENSECAG00000009654	DCAF13	99	58.824	Equus_caballus
FBgn0036500	CG7275	99	51.351	ENSEEUG00000003286	DCAF13	77	51.351	Erinaceus_europaeus
FBgn0036500	CG7275	99	53.846	ENSELUG00000006191	dcaf13	99	58.477	Esox_lucius
FBgn0036500	CG7275	99	59.276	ENSFCAG00000027256	DCAF13	99	59.276	Felis_catus
FBgn0036500	CG7275	99	59.050	ENSFALG00000005982	DCAF13	99	59.050	Ficedula_albicollis
FBgn0036500	CG7275	99	60.181	ENSFDAG00000014869	DCAF13	99	60.181	Fukomys_damarensis
FBgn0036500	CG7275	99	59.276	ENSFHEG00000009965	dcaf13	99	59.276	Fundulus_heteroclitus
FBgn0036500	CG7275	99	57.466	ENSGMOG00000005753	dcaf13	99	57.466	Gadus_morhua
FBgn0036500	CG7275	99	59.729	ENSGALG00000034618	DCAF13	78	59.729	Gallus_gallus
FBgn0036500	CG7275	93	58.753	ENSGAFG00000000368	dcaf13	88	58.753	Gambusia_affinis
FBgn0036500	CG7275	99	59.955	ENSGACG00000004840	dcaf13	99	59.955	Gasterosteus_aculeatus
FBgn0036500	CG7275	99	59.276	ENSGAGG00000025283	DCAF13	99	59.276	Gopherus_agassizii
FBgn0036500	CG7275	93	57.869	ENSGGOG00000015124	DCAF13	79	58.234	Gorilla_gorilla
FBgn0036500	CG7275	99	60.860	ENSHBUG00000015794	dcaf13	89	60.860	Haplochromis_burtoni
FBgn0036500	CG7275	99	59.276	ENSHGLG00000008862	DCAF13	99	59.276	Heterocephalus_glaber_female
FBgn0036500	CG7275	99	59.276	ENSHGLG00100017157	DCAF13	99	59.276	Heterocephalus_glaber_male
FBgn0036500	CG7275	99	59.729	ENSHCOG00000014302	dcaf13	99	59.729	Hippocampus_comes
FBgn0036500	CG7275	99	59.502	ENSIPUG00000022430	dcaf13	99	59.502	Ictalurus_punctatus
FBgn0036500	CG7275	98	60.092	ENSSTOG00000008009	DCAF13	99	60.407	Ictidomys_tridecemlineatus
FBgn0036500	CG7275	99	55.882	ENSJJAG00000001990	-	99	55.882	Jaculus_jaculus
FBgn0036500	CG7275	81	62.500	ENSJJAG00000000742	-	94	62.500	Jaculus_jaculus
FBgn0036500	CG7275	99	59.955	ENSKMAG00000002350	dcaf13	99	59.955	Kryptolebias_marmoratus
FBgn0036500	CG7275	99	60.633	ENSLBEG00000002441	dcaf13	99	60.633	Labrus_bergylta
FBgn0036500	CG7275	99	60.860	ENSLACG00000013358	DCAF13	99	60.860	Latimeria_chalumnae
FBgn0036500	CG7275	99	58.371	ENSLOCG00000009498	dcaf13	99	58.371	Lepisosteus_oculatus
FBgn0036500	CG7275	99	59.276	ENSLAFG00000009807	DCAF13	99	59.276	Loxodonta_africana
FBgn0036500	CG7275	99	59.502	ENSMFAG00000008982	-	76	59.502	Macaca_fascicularis
FBgn0036500	CG7275	99	57.466	ENSMFAG00000043378	-	99	57.466	Macaca_fascicularis
FBgn0036500	CG7275	99	59.276	ENSMMUG00000019594	-	99	59.276	Macaca_mulatta
FBgn0036500	CG7275	79	55.650	ENSMMUG00000019405	-	69	55.650	Macaca_mulatta
FBgn0036500	CG7275	99	51.131	ENSMNEG00000033963	-	74	51.131	Macaca_nemestrina
FBgn0036500	CG7275	99	42.986	ENSMNEG00000030562	-	95	42.986	Macaca_nemestrina
FBgn0036500	CG7275	99	57.692	ENSMNEG00000035898	-	99	57.692	Macaca_nemestrina
FBgn0036500	CG7275	99	45.067	ENSMLEG00000039177	-	99	45.067	Mandrillus_leucophaeus
FBgn0036500	CG7275	99	59.502	ENSMLEG00000041996	DCAF13	99	59.502	Mandrillus_leucophaeus
FBgn0036500	CG7275	99	60.181	ENSMAMG00000003196	dcaf13	99	60.181	Mastacembelus_armatus
FBgn0036500	CG7275	99	61.086	ENSMZEG00005012249	dcaf13	89	61.086	Maylandia_zebra
FBgn0036500	CG7275	94	59.189	ENSMGAG00000012340	DCAF13	98	59.189	Meleagris_gallopavo
FBgn0036500	CG7275	99	50.226	ENSMAUG00000017580	Dcaf13	99	50.226	Mesocricetus_auratus
FBgn0036500	CG7275	98	58.945	ENSMICG00000006907	DCAF13	99	59.276	Microcebus_murinus
FBgn0036500	CG7275	99	59.502	ENSMOCG00000011609	Dcaf13	99	59.502	Microtus_ochrogaster
FBgn0036500	CG7275	99	59.955	ENSMMOG00000017905	dcaf13	99	59.955	Mola_mola
FBgn0036500	CG7275	99	60.407	ENSMODG00000005549	DCAF13	99	60.407	Monodelphis_domestica
FBgn0036500	CG7275	99	60.407	ENSMALG00000007415	dcaf13	99	60.407	Monopterus_albus
FBgn0036500	CG7275	99	59.050	MGP_CAROLIEiJ_G0019757	Dcaf13	99	59.050	Mus_caroli
FBgn0036500	CG7275	99	59.276	ENSMUSG00000022300	Dcaf13	99	59.276	Mus_musculus
FBgn0036500	CG7275	99	59.276	MGP_PahariEiJ_G0019766	Dcaf13	99	59.276	Mus_pahari
FBgn0036500	CG7275	99	59.502	MGP_SPRETEiJ_G0020654	Dcaf13	99	59.502	Mus_spretus
FBgn0036500	CG7275	90	52.357	ENSMPUG00000004976	-	98	52.357	Mustela_putorius_furo
FBgn0036500	CG7275	98	59.404	ENSMLUG00000007375	DCAF13	99	59.729	Myotis_lucifugus
FBgn0036500	CG7275	99	59.276	ENSNGAG00000021670	Dcaf13	99	59.276	Nannospalax_galili
FBgn0036500	CG7275	99	60.860	ENSNBRG00000007078	dcaf13	99	60.860	Neolamprologus_brichardi
FBgn0036500	CG7275	98	59.174	ENSNLEG00000003791	DCAF13	74	59.502	Nomascus_leucogenys
FBgn0036500	CG7275	99	40.816	ENSNLEG00000032043	-	99	40.816	Nomascus_leucogenys
FBgn0036500	CG7275	75	57.619	ENSMEUG00000014697	-	79	57.619	Notamacropus_eugenii
FBgn0036500	CG7275	99	59.050	ENSODEG00000000870	DCAF13	99	59.050	Octodon_degus
FBgn0036500	CG7275	99	61.312	ENSONIG00000000142	dcaf13	99	61.312	Oreochromis_niloticus
FBgn0036500	CG7275	99	60.181	ENSOCUG00000009197	DCAF13	99	60.181	Oryctolagus_cuniculus
FBgn0036500	CG7275	99	59.729	ENSORLG00000002363	dcaf13	99	59.729	Oryzias_latipes
FBgn0036500	CG7275	99	59.729	ENSORLG00020001143	dcaf13	99	59.729	Oryzias_latipes_hni
FBgn0036500	CG7275	99	59.502	ENSORLG00015015911	dcaf13	99	59.502	Oryzias_latipes_hsok
FBgn0036500	CG7275	99	59.955	ENSOMEG00000006040	dcaf13	99	59.955	Oryzias_melastigma
FBgn0036500	CG7275	98	58.945	ENSOGAG00000002277	DCAF13	99	59.276	Otolemur_garnettii
FBgn0036500	CG7275	99	58.597	ENSOARG00000016227	DCAF13	99	58.597	Ovis_aries
FBgn0036500	CG7275	98	58.716	ENSPPAG00000029408	DCAF13	74	59.050	Pan_paniscus
FBgn0036500	CG7275	99	59.050	ENSPPRG00000005766	DCAF13	99	59.050	Panthera_pardus
FBgn0036500	CG7275	99	59.276	ENSPTIG00000016790	DCAF13	99	59.276	Panthera_tigris_altaica
FBgn0036500	CG7275	98	58.716	ENSPTRG00000020493	DCAF13	74	59.050	Pan_troglodytes
FBgn0036500	CG7275	99	57.692	ENSPANG00000026479	-	99	57.692	Papio_anubis
FBgn0036500	CG7275	99	59.502	ENSPANG00000010643	-	76	59.502	Papio_anubis
FBgn0036500	CG7275	99	58.824	ENSPKIG00000017471	dcaf13	99	58.824	Paramormyrops_kingsleyae
FBgn0036500	CG7275	99	57.466	ENSPSIG00000016768	DCAF13	99	57.466	Pelodiscus_sinensis
FBgn0036500	CG7275	99	57.014	ENSPMGG00000022144	dcaf13	99	57.014	Periophthalmus_magnuspinnatus
FBgn0036500	CG7275	99	59.955	ENSPEMG00000011958	Dcaf13	99	59.955	Peromyscus_maniculatus_bairdii
FBgn0036500	CG7275	99	59.502	ENSPCIG00000026186	DCAF13	99	60.192	Phascolarctos_cinereus
FBgn0036500	CG7275	99	59.502	ENSPFOG00000019444	dcaf13	99	59.502	Poecilia_formosa
FBgn0036500	CG7275	99	59.050	ENSPLAG00000015924	dcaf13	99	59.050	Poecilia_latipinna
FBgn0036500	CG7275	99	59.502	ENSPMEG00000004022	dcaf13	99	59.502	Poecilia_mexicana
FBgn0036500	CG7275	99	59.502	ENSPREG00000016063	dcaf13	99	59.502	Poecilia_reticulata
FBgn0036500	CG7275	98	58.945	ENSPPYG00000018809	-	99	59.276	Pongo_abelii
FBgn0036500	CG7275	98	55.275	ENSPCAG00000007620	DCAF13	75	55.656	Procavia_capensis
FBgn0036500	CG7275	97	54.861	ENSPCOG00000028064	-	99	55.251	Propithecus_coquereli
FBgn0036500	CG7275	99	58.597	ENSPVAG00000017178	DCAF13	75	58.597	Pteropus_vampyrus
FBgn0036500	CG7275	99	61.086	ENSPNYG00000003861	dcaf13	99	61.086	Pundamilia_nyererei
FBgn0036500	CG7275	99	58.371	ENSPNAG00000010091	dcaf13	99	58.371	Pygocentrus_nattereri
FBgn0036500	CG7275	99	59.502	ENSRNOG00000004301	Dcaf13	99	59.502	Rattus_norvegicus
FBgn0036500	CG7275	99	59.502	ENSRBIG00000032300	DCAF13	84	59.502	Rhinopithecus_bieti
FBgn0036500	CG7275	98	42.045	ENSRROG00000032221	-	99	42.045	Rhinopithecus_roxellana
FBgn0036500	CG7275	99	59.276	ENSRROG00000040442	DCAF13	99	59.276	Rhinopithecus_roxellana
FBgn0036500	CG7275	99	43.871	YLL011W	-	94	43.871	Saccharomyces_cerevisiae
FBgn0036500	CG7275	99	59.050	ENSSBOG00000025597	DCAF13	99	59.050	Saimiri_boliviensis_boliviensis
FBgn0036500	CG7275	99	59.050	ENSSHAG00000006588	DCAF13	99	59.050	Sarcophilus_harrisii
FBgn0036500	CG7275	99	60.181	ENSSFOG00015006138	dcaf13	99	60.181	Scleropages_formosus
FBgn0036500	CG7275	99	59.276	ENSSMAG00000009568	dcaf13	99	59.276	Scophthalmus_maximus
FBgn0036500	CG7275	99	59.955	ENSSLDG00000010517	dcaf13	99	59.955	Seriola_lalandi_dorsalis
FBgn0036500	CG7275	99	58.597	ENSSPUG00000009148	DCAF13	99	58.597	Sphenodon_punctatus
FBgn0036500	CG7275	99	60.860	ENSSPAG00000019890	dcaf13	99	60.860	Stegastes_partitus
FBgn0036500	CG7275	99	57.919	ENSSSCG00000006048	DCAF13	99	57.919	Sus_scrofa
FBgn0036500	CG7275	94	58.711	ENSTGUG00000012152	DCAF13	99	58.711	Taeniopygia_guttata
FBgn0036500	CG7275	99	59.050	ENSTRUG00000007438	dcaf13	99	59.050	Takifugu_rubripes
FBgn0036500	CG7275	92	59.951	ENSTNIG00000008215	dcaf13	83	59.951	Tetraodon_nigroviridis
FBgn0036500	CG7275	51	56.637	ENSTBEG00000015812	-	50	56.637	Tupaia_belangeri
FBgn0036500	CG7275	96	52.582	ENSTTRG00000014906	DCAF13	74	52.489	Tursiops_truncatus
FBgn0036500	CG7275	99	58.824	ENSUAMG00000017931	DCAF13	99	58.824	Ursus_americanus
FBgn0036500	CG7275	99	52.727	ENSUMAG00000019830	DCAF13	75	52.727	Ursus_maritimus
FBgn0036500	CG7275	99	58.824	ENSVPAG00000006725	DCAF13	75	58.824	Vicugna_pacos
FBgn0036500	CG7275	93	59.712	ENSVVUG00000016884	DCAF13	89	59.712	Vulpes_vulpes
FBgn0036500	CG7275	81	61.813	ENSXETG00000004092	dcaf13	100	61.813	Xenopus_tropicalis
FBgn0036500	CG7275	99	55.430	ENSXCOG00000017005	dcaf13	99	55.430	Xiphophorus_couchianus
FBgn0036500	CG7275	99	59.502	ENSXMAG00000026809	dcaf13	99	59.502	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21873635.	IBA	Process
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0032040	small-subunit processome	21873635.	IBA	Component
GO:0080008	Cul4-RING E3 ubiquitin ligase complex	21873635.	IBA	Component