EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0036853 (Gene tree)
Gene ID: 40091
Gene Symbol: mRpL21
Alias: -
Full Name: mitochondrial ribosomal protein L21
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 1772 bases
Position: chr3L:19253290-19255061
Accession: FBgn0036853
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0074789	Ribosomal_L21p	PF00829.21	3e-27	1	1
FBpp0305426	Ribosomal_L21p	PF00829.21	3e-27	1	1
FBpp0312166	Ribosomal_L21p	PF00829.21	3e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0075022	-	742	-	FBpp0074789	201 (aa)	-	Q9VVX4
FBtr0333224	-	866	-	FBpp0305426	201 (aa)	-	Q9VVX4
FBtr0346548	-	1696	-	FBpp0312166	201 (aa)	-	Q8SYD8

Gene Model

Click here to download FBgn0036853's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0036853's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0036853	mRpL21	61	42.276	ENSG00000197345	MRPL21	93	45.946	Homo_sapiens
FBgn0036853	mRpL21	85	38.857	ENSAPOG00000009928	mrpl21	89	38.857	Acanthochromis_polyacanthus
FBgn0036853	mRpL21	60	42.500	ENSAMEG00000008591	MRPL21	57	42.500	Ailuropoda_melanoleuca
FBgn0036853	mRpL21	66	45.865	ENSACIG00000012089	MRPL21	68	45.865	Amphilophus_citrinellus
FBgn0036853	mRpL21	84	39.655	ENSAOCG00000012726	MRPL21	89	39.655	Amphiprion_ocellaris
FBgn0036853	mRpL21	84	39.655	ENSAPEG00000005507	MRPL21	88	39.655	Amphiprion_percula
FBgn0036853	mRpL21	65	45.038	ENSATEG00000021329	mrpl21	66	45.038	Anabas_testudineus
FBgn0036853	mRpL21	65	41.538	ENSAPLG00000003685	MRPL21	73	41.538	Anas_platyrhynchos
FBgn0036853	mRpL21	65	41.985	ENSACAG00000013770	MRPL21	66	41.985	Anolis_carolinensis
FBgn0036853	mRpL21	61	42.276	ENSANAG00000020754	MRPL21	67	39.695	Aotus_nancymaae
FBgn0036853	mRpL21	90	37.634	ENSACLG00000016665	-	92	37.634	Astatotilapia_calliptera
FBgn0036853	mRpL21	66	41.667	ENSAMXG00000036794	mrpl21	69	41.667	Astyanax_mexicanus
FBgn0036853	mRpL21	63	38.889	WBGene00023422	mrpl-21	72	38.889	Caenorhabditis_elegans
FBgn0036853	mRpL21	61	43.089	ENSCJAG00000015881	MRPL21	66	44.762	Callithrix_jacchus
FBgn0036853	mRpL21	56	40.179	ENSCAFG00000031492	MRPL21	54	40.179	Canis_familiaris
FBgn0036853	mRpL21	61	46.341	ENSCHIG00000020757	MRPL21	59	46.341	Capra_hircus
FBgn0036853	mRpL21	60	45.833	ENSTSYG00000002850	MRPL21	60	44.715	Carlito_syrichta
FBgn0036853	mRpL21	61	43.902	ENSCAPG00000014147	MRPL21	70	43.902	Cavia_aperea
FBgn0036853	mRpL21	61	43.902	ENSCPOG00000038509	MRPL21	59	43.902	Cavia_porcellus
FBgn0036853	mRpL21	61	34.959	ENSCCAG00000023999	MRPL21	60	32.824	Cebus_capucinus
FBgn0036853	mRpL21	61	43.089	ENSCATG00000041171	MRPL21	63	40.458	Cercocebus_atys
FBgn0036853	mRpL21	61	44.715	ENSCLAG00000016038	MRPL21	59	44.715	Chinchilla_lanigera
FBgn0036853	mRpL21	65	40.458	ENSCSAG00000009065	MRPL21	63	40.458	Chlorocebus_sabaeus
FBgn0036853	mRpL21	65	43.846	ENSCHOG00000002067	MRPL21	63	43.846	Choloepus_hoffmanni
FBgn0036853	mRpL21	65	44.275	ENSCPBG00000008807	-	94	44.275	Chrysemys_picta_bellii
FBgn0036853	mRpL21	58	41.880	ENSCING00000022513	-	95	41.880	Ciona_intestinalis
FBgn0036853	mRpL21	60	41.322	ENSCSAVG00000007364	-	54	41.322	Ciona_savignyi
FBgn0036853	mRpL21	61	43.902	ENSCANG00000043723	MRPL21	60	43.902	Colobus_angolensis_palliatus
FBgn0036853	mRpL21	65	40.000	ENSCGRG00001024565	Mrpl21	62	40.000	Cricetulus_griseus_chok1gshd
FBgn0036853	mRpL21	65	40.000	ENSCGRG00000007332	Mrpl21	62	40.000	Cricetulus_griseus_crigri
FBgn0036853	mRpL21	64	50.388	ENSCSEG00000020721	MRPL21	71	47.445	Cynoglossus_semilaevis
FBgn0036853	mRpL21	72	45.578	ENSCVAG00000014089	mrpl21	75	45.578	Cyprinodon_variegatus
FBgn0036853	mRpL21	62	41.129	ENSDARG00000003846	mrpl21	60	41.129	Danio_rerio
FBgn0036853	mRpL21	61	45.528	ENSDORG00000025967	Mrpl21	70	45.528	Dipodomys_ordii
FBgn0036853	mRpL21	60	43.333	ENSEBUG00000008024	mrpl21	61	43.333	Eptatretus_burgeri
FBgn0036853	mRpL21	78	41.139	ENSELUG00000023223	mrpl21	74	41.139	Esox_lucius
FBgn0036853	mRpL21	65	39.695	ENSFCAG00000005779	MRPL21	63	39.695	Felis_catus
FBgn0036853	mRpL21	65	42.308	ENSFALG00000011677	MRPL21	61	42.308	Ficedula_albicollis
FBgn0036853	mRpL21	66	47.727	ENSFHEG00000003319	mrpl21	65	47.727	Fundulus_heteroclitus
FBgn0036853	mRpL21	50	37.000	ENSGMOG00000010935	-	68	37.143	Gadus_morhua
FBgn0036853	mRpL21	65	41.538	ENSGALG00000004362	MRPL21	69	41.538	Gallus_gallus
FBgn0036853	mRpL21	84	43.182	ENSGAFG00000018076	mrpl21	88	43.182	Gambusia_affinis
FBgn0036853	mRpL21	76	43.226	ENSGACG00000019780	-	89	40.541	Gasterosteus_aculeatus
FBgn0036853	mRpL21	65	43.511	ENSGAGG00000020313	MRPL21	62	43.511	Gopherus_agassizii
FBgn0036853	mRpL21	61	42.276	ENSGGOG00000012124	MRPL21	62	42.276	Gorilla_gorilla
FBgn0036853	mRpL21	90	38.172	ENSHBUG00000006577	-	93	38.172	Haplochromis_burtoni
FBgn0036853	mRpL21	61	43.902	ENSHGLG00000007657	MRPL21	59	43.902	Heterocephalus_glaber_female
FBgn0036853	mRpL21	61	43.902	ENSHGLG00100008966	MRPL21	70	43.902	Heterocephalus_glaber_male
FBgn0036853	mRpL21	92	38.071	ENSHCOG00000001927	-	98	38.071	Hippocampus_comes
FBgn0036853	mRpL21	62	46.032	ENSIPUG00000017862	MRPL21	66	46.032	Ictalurus_punctatus
FBgn0036853	mRpL21	65	41.985	ENSSTOG00000032759	MRPL21	75	41.985	Ictidomys_tridecemlineatus
FBgn0036853	mRpL21	65	39.695	ENSJJAG00000018455	Mrpl21	63	39.695	Jaculus_jaculus
FBgn0036853	mRpL21	76	37.908	ENSKMAG00000020148	mrpl21	74	37.908	Kryptolebias_marmoratus
FBgn0036853	mRpL21	62	44.355	ENSLBEG00000001294	MRPL21	64	44.355	Labrus_bergylta
FBgn0036853	mRpL21	73	38.356	ENSLACG00000018790	MRPL21	71	38.356	Latimeria_chalumnae
FBgn0036853	mRpL21	78	39.490	ENSLOCG00000001501	mrpl21	75	39.490	Lepisosteus_oculatus
FBgn0036853	mRpL21	65	41.985	ENSLAFG00000003336	MRPL21	63	41.985	Loxodonta_africana
FBgn0036853	mRpL21	50	41.176	ENSMMUG00000010124	MRPL21	56	41.176	Macaca_mulatta
FBgn0036853	mRpL21	65	40.458	ENSMNEG00000036906	MRPL21	63	40.458	Macaca_nemestrina
FBgn0036853	mRpL21	61	43.089	ENSMLEG00000044097	MRPL21	64	40.458	Mandrillus_leucophaeus
FBgn0036853	mRpL21	67	42.647	ENSMAMG00000001083	MRPL21	62	42.647	Mastacembelus_armatus
FBgn0036853	mRpL21	90	37.634	ENSMZEG00005005496	-	93	37.634	Maylandia_zebra
FBgn0036853	mRpL21	65	40.769	ENSMGAG00000002814	MRPL21	83	40.769	Meleagris_gallopavo
FBgn0036853	mRpL21	65	39.695	ENSMAUG00000018243	Mrpl21	63	39.695	Mesocricetus_auratus
FBgn0036853	mRpL21	65	40.458	ENSMICG00000046580	MRPL21	63	40.458	Microcebus_murinus
FBgn0036853	mRpL21	73	38.356	ENSMOCG00000002555	Mrpl21	75	38.889	Microtus_ochrogaster
FBgn0036853	mRpL21	62	44.355	ENSMMOG00000000053	-	65	44.355	Mola_mola
FBgn0036853	mRpL21	66	42.424	ENSMODG00000004013	MRPL21	59	42.424	Monodelphis_domestica
FBgn0036853	mRpL21	59	51.261	ENSMALG00000021416	mrpl21	72	51.261	Monopterus_albus
FBgn0036853	mRpL21	61	42.276	MGP_CAROLIEiJ_G0022464	Mrpl21	63	39.695	Mus_caroli
FBgn0036853	mRpL21	65	40.458	ENSMUSG00000024829	Mrpl21	63	40.458	Mus_musculus
FBgn0036853	mRpL21	61	42.276	MGP_PahariEiJ_G0013961	-	59	42.276	Mus_pahari
FBgn0036853	mRpL21	65	41.221	ENSMPUG00000004430	MRPL21	64	41.221	Mustela_putorius_furo
FBgn0036853	mRpL21	84	38.690	ENSMLUG00000017397	MRPL21	89	38.690	Myotis_lucifugus
FBgn0036853	mRpL21	61	44.715	ENSNGAG00000023813	Mrpl21	60	44.715	Nannospalax_galili
FBgn0036853	mRpL21	61	42.276	ENSNLEG00000006605	MRPL21	63	39.695	Nomascus_leucogenys
FBgn0036853	mRpL21	51	41.748	ENSMEUG00000012464	-	82	41.441	Notamacropus_eugenii
FBgn0036853	mRpL21	60	35.833	ENSOPRG00000011828	MRPL21	59	35.833	Ochotona_princeps
FBgn0036853	mRpL21	61	44.715	ENSODEG00000017369	MRPL21	59	44.715	Octodon_degus
FBgn0036853	mRpL21	66	42.857	ENSONIG00000020699	MRPL21	68	42.857	Oreochromis_niloticus
FBgn0036853	mRpL21	59	51.261	ENSORLG00000000120	MRPL21	68	46.212	Oryzias_latipes
FBgn0036853	mRpL21	66	46.970	ENSORLG00020020197	-	60	46.970	Oryzias_latipes_hni
FBgn0036853	mRpL21	67	47.059	ENSORLG00015020425	MRPL21	66	47.059	Oryzias_latipes_hsok
FBgn0036853	mRpL21	66	46.970	ENSOMEG00000014420	MRPL21	67	46.970	Oryzias_melastigma
FBgn0036853	mRpL21	61	41.600	ENSOARG00000016869	MRPL21	70	41.600	Ovis_aries
FBgn0036853	mRpL21	61	42.276	ENSPPAG00000038393	MRPL21	63	39.695	Pan_paniscus
FBgn0036853	mRpL21	65	40.458	ENSPPRG00000024109	MRPL21	64	40.458	Panthera_pardus
FBgn0036853	mRpL21	57	44.737	ENSPTIG00000000955	MRPL21	96	44.211	Panthera_tigris_altaica
FBgn0036853	mRpL21	61	43.089	ENSPTRG00000003988	MRPL21	63	40.458	Pan_troglodytes
FBgn0036853	mRpL21	61	43.089	ENSPANG00000018811	MRPL21	64	40.458	Papio_anubis
FBgn0036853	mRpL21	69	43.165	ENSPKIG00000012297	mrpl21	65	43.165	Paramormyrops_kingsleyae
FBgn0036853	mRpL21	65	43.077	ENSPSIG00000015523	MRPL21	70	43.077	Pelodiscus_sinensis
FBgn0036853	mRpL21	66	45.455	ENSPMGG00000000115	-	67	45.455	Periophthalmus_magnuspinnatus
FBgn0036853	mRpL21	61	42.276	ENSPEMG00000015425	Mrpl21	59	42.276	Peromyscus_maniculatus_bairdii
FBgn0036853	mRpL21	73	43.151	ENSPMAG00000008611	mrpl21	94	43.151	Petromyzon_marinus
FBgn0036853	mRpL21	84	42.614	ENSPFOG00000020119	mrpl21	87	42.614	Poecilia_formosa
FBgn0036853	mRpL21	84	42.614	ENSPLAG00000013159	mrpl21	85	42.614	Poecilia_latipinna
FBgn0036853	mRpL21	84	40.230	ENSPMEG00000016468	mrpl21	85	40.230	Poecilia_mexicana
FBgn0036853	mRpL21	84	42.045	ENSPREG00000021810	mrpl21	88	42.045	Poecilia_reticulata
FBgn0036853	mRpL21	84	37.500	ENSPCAG00000003449	MRPL21	85	37.500	Procavia_capensis
FBgn0036853	mRpL21	65	41.985	ENSPCOG00000015404	MRPL21	79	41.985	Propithecus_coquereli
FBgn0036853	mRpL21	61	43.089	ENSPVAG00000006772	MRPL21	71	43.089	Pteropus_vampyrus
FBgn0036853	mRpL21	90	38.172	ENSPNYG00000023486	-	93	38.172	Pundamilia_nyererei
FBgn0036853	mRpL21	69	41.007	ENSPNAG00000003269	mrpl21	65	41.007	Pygocentrus_nattereri
FBgn0036853	mRpL21	65	38.931	ENSRNOG00000013845	Mrpl21	63	38.931	Rattus_norvegicus
FBgn0036853	mRpL21	61	43.089	ENSRBIG00000044044	MRPL21	63	40.458	Rhinopithecus_bieti
FBgn0036853	mRpL21	61	43.089	ENSRROG00000025365	MRPL21	59	43.089	Rhinopithecus_roxellana
FBgn0036853	mRpL21	61	42.276	ENSSBOG00000021429	MRPL21	63	39.695	Saimiri_boliviensis_boliviensis
FBgn0036853	mRpL21	61	44.715	ENSSHAG00000000978	MRPL21	79	44.355	Sarcophilus_harrisii
FBgn0036853	mRpL21	78	38.217	ENSSFOG00015019282	mrpl21	64	38.217	Scleropages_formosus
FBgn0036853	mRpL21	82	40.237	ENSSMAG00000020855	mrpl21	85	40.237	Scophthalmus_maximus
FBgn0036853	mRpL21	62	46.774	ENSSDUG00000001524	-	64	46.774	Seriola_dumerili
FBgn0036853	mRpL21	62	45.968	ENSSLDG00000014690	-	64	45.968	Seriola_lalandi_dorsalis
FBgn0036853	mRpL21	65	41.985	ENSSPUG00000008781	MRPL21	66	41.985	Sphenodon_punctatus
FBgn0036853	mRpL21	66	44.361	ENSSPAG00000010420	MRPL21	69	44.361	Stegastes_partitus
FBgn0036853	mRpL21	60	46.667	ENSSSCG00000012879	MRPL21	57	46.667	Sus_scrofa
FBgn0036853	mRpL21	65	41.538	ENSTGUG00000006693	MRPL21	84	41.538	Taeniopygia_guttata
FBgn0036853	mRpL21	66	44.030	ENSTRUG00000006299	-	66	44.030	Takifugu_rubripes
FBgn0036853	mRpL21	59	45.378	ENSTNIG00000006295	-	60	45.378	Tetraodon_nigroviridis
FBgn0036853	mRpL21	51	40.196	ENSTBEG00000017030	MRPL21	61	39.286	Tupaia_belangeri
FBgn0036853	mRpL21	60	43.333	ENSUMAG00000018330	MRPL21	65	43.333	Ursus_maritimus
FBgn0036853	mRpL21	65	42.748	ENSXETG00000019978	mrpl21	74	42.748	Xenopus_tropicalis
FBgn0036853	mRpL21	91	41.799	ENSXCOG00000011393	mrpl21	92	41.799	Xiphophorus_couchianus
FBgn0036853	mRpL21	84	42.614	ENSXMAG00000020294	mrpl21	85	42.614	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	11551941.	ISS	Function
GO:0003735	structural constituent of ribosome	17927810.	TAS	Function
GO:0005762	mitochondrial large ribosomal subunit	21873635.	IBA	Component
GO:0005762	mitochondrial large ribosomal subunit	11551941.	ISS	Component
GO:0005762	mitochondrial large ribosomal subunit	17927810.	TAS	Component
GO:0006412	translation	-	IEA	Process
GO:0032543	mitochondrial translation	-	IC	Process
GO:0032543	mitochondrial translation	17927810.	TAS	Process