EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0036889 (Gene tree)
Gene ID: 40132
Gene Symbol: CG14100
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Minus strand
Length: 1453 bases
Position: chr3L:19589072-19590524
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0074739	SpoU_sub_bind	PF08032.12	3.5e-11	1	1
FBpp0074739	SpoU_methylase	PF00588.19	1.1e-20	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0074971	-	1393	-	FBpp0074739	407 (aa)	-	Q9VW14

Gene Model

Click here to download FBgn0036889's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0036889's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0036889	CG14100	68	31.579	ENSAPOG00000002497	mrm3b	70	31.579	Acanthochromis_polyacanthus
FBgn0036889	CG14100	73	32.174	ENSACIG00000007921	mrm3b	74	32.174	Amphilophus_citrinellus
FBgn0036889	CG14100	74	32.081	ENSAOCG00000023615	mrm3b	73	32.081	Amphiprion_ocellaris
FBgn0036889	CG14100	74	32.081	ENSAPEG00000009402	mrm3b	73	32.081	Amphiprion_percula
FBgn0036889	CG14100	81	32.115	ENSATEG00000022280	mrm3b	80	32.115	Anabas_testudineus
FBgn0036889	CG14100	69	34.969	ENSACAG00000015977	-	77	34.969	Anolis_carolinensis
FBgn0036889	CG14100	74	31.124	ENSACLG00000005833	mrm3b	73	31.124	Astatotilapia_calliptera
FBgn0036889	CG14100	78	30.029	ENSAMXG00000030559	mrm3a	75	30.029	Astyanax_mexicanus
FBgn0036889	CG14100	75	31.461	ENSAMXG00000044018	mrm3b	77	31.180	Astyanax_mexicanus
FBgn0036889	CG14100	93	30.404	ENSBTAG00000019162	MRM3	98	30.404	Bos_taurus
FBgn0036889	CG14100	76	31.667	ENSCPBG00000015794	-	71	31.534	Chrysemys_picta_bellii
FBgn0036889	CG14100	71	30.357	ENSCSEG00000013521	mrm3b	70	30.357	Cynoglossus_semilaevis
FBgn0036889	CG14100	67	30.745	ENSDARG00000069082	mrm3b	67	30.380	Danio_rerio
FBgn0036889	CG14100	72	33.333	ENSDARG00000016543	mrm3a	70	33.438	Danio_rerio
FBgn0036889	CG14100	74	30.636	ENSFHEG00000003298	mrm3b	74	30.925	Fundulus_heteroclitus
FBgn0036889	CG14100	74	32.749	ENSGAFG00000012768	mrm3b	74	32.845	Gambusia_affinis
FBgn0036889	CG14100	74	31.412	ENSHBUG00000017040	mrm3b	73	31.412	Haplochromis_burtoni
FBgn0036889	CG14100	73	31.231	ENSHCOG00000015618	mrm3b	74	31.231	Hippocampus_comes
FBgn0036889	CG14100	86	30.591	ENSIPUG00000016782	mrm3	82	30.990	Ictalurus_punctatus
FBgn0036889	CG14100	74	35.398	ENSKMAG00000019066	mrm3b	75	35.398	Kryptolebias_marmoratus
FBgn0036889	CG14100	73	30.857	ENSMAMG00000018298	mrm3b	75	31.714	Mastacembelus_armatus
FBgn0036889	CG14100	74	31.124	ENSMZEG00005007844	mrm3b	73	31.124	Maylandia_zebra
FBgn0036889	CG14100	75	34.718	ENSMALG00000017429	mrm3b	74	34.718	Monopterus_albus
FBgn0036889	CG14100	74	31.412	ENSNBRG00000020148	mrm3b	74	31.412	Neolamprologus_brichardi
FBgn0036889	CG14100	74	32.000	ENSONIG00000013152	mrm3b	74	32.081	Oreochromis_niloticus
FBgn0036889	CG14100	77	31.831	ENSORLG00000028441	mrm3b	76	32.303	Oryzias_latipes
FBgn0036889	CG14100	77	31.831	ENSORLG00020009301	mrm3b	76	32.303	Oryzias_latipes_hni
FBgn0036889	CG14100	77	31.831	ENSORLG00015014199	mrm3b	76	32.303	Oryzias_latipes_hsok
FBgn0036889	CG14100	77	33.618	ENSOMEG00000000985	mrm3b	76	33.618	Oryzias_melastigma
FBgn0036889	CG14100	74	30.836	ENSPMGG00000013075	mrm3b	74	31.988	Periophthalmus_magnuspinnatus
FBgn0036889	CG14100	75	32.584	ENSPFOG00000010323	mrm3b	76	32.479	Poecilia_formosa
FBgn0036889	CG14100	75	32.102	ENSPLAG00000019061	mrm3b	74	32.584	Poecilia_latipinna
FBgn0036889	CG14100	75	32.584	ENSPMEG00000000747	mrm3b	74	32.584	Poecilia_mexicana
FBgn0036889	CG14100	74	31.751	ENSPNYG00000016809	-	73	31.858	Pundamilia_nyererei
FBgn0036889	CG14100	74	31.858	ENSPNYG00000001035	-	75	31.858	Pundamilia_nyererei
FBgn0036889	CG14100	75	30.791	ENSPNAG00000003152	mrm3b	79	30.791	Pygocentrus_nattereri
FBgn0036889	CG14100	75	45.614	ENSSFOG00015004931	mrm3	62	45.614	Scleropages_formosus
FBgn0036889	CG14100	74	32.277	ENSSMAG00000007212	mrm3b	74	32.277	Scophthalmus_maximus
FBgn0036889	CG14100	73	30.548	ENSSLDG00000011064	-	72	30.548	Seriola_lalandi_dorsalis
FBgn0036889	CG14100	73	30.548	ENSSLDG00000010991	-	72	30.548	Seriola_lalandi_dorsalis
FBgn0036889	CG14100	75	31.198	ENSSPAG00000022282	mrm3b	75	31.624	Stegastes_partitus
FBgn0036889	CG14100	74	32.081	ENSXMAG00000019121	mrm3b	74	32.464	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0006396	RNA processing	-	IEA	Process
GO:0008173	RNA methyltransferase activity	-	IEA	Function