EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0036964 (Gene tree)
Gene ID: 40228
Gene Symbol: FRG1
Alias: -
Full Name: FSHD region gene 1
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 1170 bases
Position: chr3L:20295802-20296971
Accession: FBgn0036964
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0074616	FRG1	PF06229.12	4.2e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0074847	-	903	-	FBpp0074616	262 (aa)	-	Q9VWA8

Gene Model

Click here to download FBgn0036964's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0036964's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0036964	FRG1	81	51.163	ENSG00000109536	FRG1	97	51.327	Homo_sapiens
FBgn0036964	FRG1	100	49.430	ENSAPOG00000001060	frg1	100	49.430	Acanthochromis_polyacanthus
FBgn0036964	FRG1	100	48.106	ENSAMEG00000013503	FRG1	100	47.388	Ailuropoda_melanoleuca
FBgn0036964	FRG1	81	51.869	ENSACIG00000022283	frg1	96	51.869	Amphilophus_citrinellus
FBgn0036964	FRG1	81	52.336	ENSAOCG00000024240	frg1	83	52.336	Amphiprion_ocellaris
FBgn0036964	FRG1	100	49.049	ENSAPEG00000002486	frg1	100	49.049	Amphiprion_percula
FBgn0036964	FRG1	100	47.909	ENSATEG00000010414	frg1	100	47.909	Anabas_testudineus
FBgn0036964	FRG1	81	51.402	ENSAPLG00000007785	-	83	51.402	Anas_platyrhynchos
FBgn0036964	FRG1	100	48.669	ENSACAG00000006877	-	83	53.521	Anolis_carolinensis
FBgn0036964	FRG1	100	48.106	ENSANAG00000020876	FRG1	100	47.744	Aotus_nancymaae
FBgn0036964	FRG1	100	45.247	ENSACLG00000027065	frg1	88	50.467	Astatotilapia_calliptera
FBgn0036964	FRG1	100	48.485	ENSAMXG00000032700	frg1	100	48.485	Astyanax_mexicanus
FBgn0036964	FRG1	100	48.106	ENSBTAG00000007089	FRG1	100	47.388	Bos_taurus
FBgn0036964	FRG1	84	34.615	WBGene00014177	frg-1	85	34.615	Caenorhabditis_elegans
FBgn0036964	FRG1	100	48.106	ENSCJAG00000011272	FRG1	100	47.744	Callithrix_jacchus
FBgn0036964	FRG1	100	48.106	ENSCAFG00000007135	FRG1	100	47.388	Canis_familiaris
FBgn0036964	FRG1	81	51.174	ENSCAFG00020000082	-	85	51.174	Canis_lupus_dingo
FBgn0036964	FRG1	100	48.106	ENSCHIG00000011585	-	100	47.388	Capra_hircus
FBgn0036964	FRG1	78	35.610	ENSTSYG00000031599	-	82	35.610	Carlito_syrichta
FBgn0036964	FRG1	81	51.628	ENSCAPG00000016056	-	87	51.628	Cavia_aperea
FBgn0036964	FRG1	81	51.628	ENSCPOG00000022277	-	83	51.628	Cavia_porcellus
FBgn0036964	FRG1	100	48.106	ENSCCAG00000024627	FRG1	100	47.744	Cebus_capucinus
FBgn0036964	FRG1	81	50.698	ENSCATG00000029230	FRG1	100	47.368	Cercocebus_atys
FBgn0036964	FRG1	100	38.931	ENSCLAG00000006068	-	81	40.566	Chinchilla_lanigera
FBgn0036964	FRG1	80	39.336	ENSCLAG00000009263	-	80	37.915	Chinchilla_lanigera
FBgn0036964	FRG1	100	41.288	ENSCLAG00000004960	-	82	41.860	Chinchilla_lanigera
FBgn0036964	FRG1	81	51.628	ENSCLAG00000000370	-	83	51.628	Chinchilla_lanigera
FBgn0036964	FRG1	81	47.664	ENSCSAG00000017729	-	99	47.664	Chlorocebus_sabaeus
FBgn0036964	FRG1	81	50.698	ENSCSAG00000002899	FRG1	100	47.368	Chlorocebus_sabaeus
FBgn0036964	FRG1	81	52.804	ENSCPBG00000009211	-	83	52.804	Chrysemys_picta_bellii
FBgn0036964	FRG1	83	47.297	ENSCING00000005161	-	82	47.297	Ciona_intestinalis
FBgn0036964	FRG1	52	43.796	ENSCSAVG00000008018	-	72	44.697	Ciona_savignyi
FBgn0036964	FRG1	81	50.698	ENSCANG00000020991	FRG1	100	47.368	Colobus_angolensis_palliatus
FBgn0036964	FRG1	81	51.163	ENSCGRG00001014998	Frg1	83	51.163	Cricetulus_griseus_chok1gshd
FBgn0036964	FRG1	81	51.163	ENSCGRG00000011860	-	83	51.163	Cricetulus_griseus_crigri
FBgn0036964	FRG1	100	39.924	ENSCGRG00000003902	-	77	42.056	Cricetulus_griseus_crigri
FBgn0036964	FRG1	96	47.059	ENSCSEG00000015950	frg1	100	45.736	Cynoglossus_semilaevis
FBgn0036964	FRG1	100	49.049	ENSCVAG00000009985	frg1	100	49.621	Cyprinodon_variegatus
FBgn0036964	FRG1	100	48.289	ENSDARG00000056504	frg1	100	48.864	Danio_rerio
FBgn0036964	FRG1	81	51.163	ENSDNOG00000014886	FRG1	83	51.163	Dasypus_novemcinctus
FBgn0036964	FRG1	81	47.196	ENSDORG00000016190	Frg1	82	47.196	Dipodomys_ordii
FBgn0036964	FRG1	100	46.970	ENSETEG00000012349	-	100	47.368	Echinops_telfairi
FBgn0036964	FRG1	56	40.523	ENSEBUG00000012359	FRG1	69	46.610	Eptatretus_burgeri
FBgn0036964	FRG1	81	51.163	ENSEASG00005017497	FRG1	83	51.163	Equus_asinus_asinus
FBgn0036964	FRG1	81	51.163	ENSECAG00000003122	FRG1	83	51.163	Equus_caballus
FBgn0036964	FRG1	60	49.367	ENSEEUG00000000145	-	100	49.367	Erinaceus_europaeus
FBgn0036964	FRG1	100	46.388	ENSELUG00000021712	frg1	100	46.008	Esox_lucius
FBgn0036964	FRG1	100	48.106	ENSFCAG00000025737	FRG1	100	47.388	Felis_catus
FBgn0036964	FRG1	81	50.935	ENSFALG00000011231	-	88	49.778	Ficedula_albicollis
FBgn0036964	FRG1	100	41.887	ENSFDAG00000012697	-	81	45.581	Fukomys_damarensis
FBgn0036964	FRG1	81	51.628	ENSFDAG00000000962	-	83	51.628	Fukomys_damarensis
FBgn0036964	FRG1	100	48.669	ENSFHEG00000010540	frg1	100	48.669	Fundulus_heteroclitus
FBgn0036964	FRG1	100	47.909	ENSGMOG00000000867	frg1	100	48.496	Gadus_morhua
FBgn0036964	FRG1	84	49.778	ENSGALG00000013590	-	88	49.778	Gallus_gallus
FBgn0036964	FRG1	82	45.116	ENSGAFG00000013855	frg1	100	46.759	Gambusia_affinis
FBgn0036964	FRG1	100	47.909	ENSGACG00000016888	frg1	100	47.909	Gasterosteus_aculeatus
FBgn0036964	FRG1	81	53.271	ENSGAGG00000025012	-	83	53.271	Gopherus_agassizii
FBgn0036964	FRG1	66	41.954	ENSGGOG00000012888	-	84	42.515	Gorilla_gorilla
FBgn0036964	FRG1	100	47.529	ENSHBUG00000010667	frg1	100	47.529	Haplochromis_burtoni
FBgn0036964	FRG1	100	42.803	ENSHGLG00000001211	-	84	46.047	Heterocephalus_glaber_female
FBgn0036964	FRG1	99	46.388	ENSHGLG00000020402	-	78	49.533	Heterocephalus_glaber_female
FBgn0036964	FRG1	99	45.627	ENSHGLG00000020943	-	83	48.598	Heterocephalus_glaber_female
FBgn0036964	FRG1	100	48.106	ENSHGLG00000005601	FRG1	83	51.628	Heterocephalus_glaber_female
FBgn0036964	FRG1	99	45.627	ENSHGLG00100021211	-	83	48.598	Heterocephalus_glaber_male
FBgn0036964	FRG1	100	39.163	ENSHGLG00100015285	-	97	41.880	Heterocephalus_glaber_male
FBgn0036964	FRG1	100	43.182	ENSHGLG00100010674	-	84	46.512	Heterocephalus_glaber_male
FBgn0036964	FRG1	100	48.485	ENSHGLG00100016261	-	83	52.093	Heterocephalus_glaber_male
FBgn0036964	FRG1	81	51.163	ENSHCOG00000000224	frg1	91	51.163	Hippocampus_comes
FBgn0036964	FRG1	100	48.485	ENSIPUG00000022716	frg1	88	51.628	Ictalurus_punctatus
FBgn0036964	FRG1	81	51.163	ENSSTOG00000002857	-	83	51.163	Ictidomys_tridecemlineatus
FBgn0036964	FRG1	81	50.698	ENSJJAG00000020625	Frg1	100	47.368	Jaculus_jaculus
FBgn0036964	FRG1	81	50.935	ENSKMAG00000005841	frg1	84	50.935	Kryptolebias_marmoratus
FBgn0036964	FRG1	100	44.867	ENSLBEG00000001466	frg1	83	49.296	Labrus_bergylta
FBgn0036964	FRG1	100	44.528	ENSLACG00000010243	frg1	82	47.685	Latimeria_chalumnae
FBgn0036964	FRG1	81	50.467	ENSLOCG00000013868	frg1	84	50.467	Lepisosteus_oculatus
FBgn0036964	FRG1	81	51.163	ENSLAFG00000011191	FRG1	83	51.163	Loxodonta_africana
FBgn0036964	FRG1	81	43.256	ENSMFAG00000042873	-	89	43.256	Macaca_fascicularis
FBgn0036964	FRG1	81	50.698	ENSMFAG00000031178	FRG1	100	47.368	Macaca_fascicularis
FBgn0036964	FRG1	76	41.176	ENSMMUG00000047496	-	87	41.176	Macaca_mulatta
FBgn0036964	FRG1	81	50.704	ENSMMUG00000001824	FRG1	100	47.368	Macaca_mulatta
FBgn0036964	FRG1	77	48.039	ENSMNEG00000018620	FRG1	86	48.020	Macaca_nemestrina
FBgn0036964	FRG1	81	50.698	ENSMLEG00000028881	FRG1	100	47.368	Mandrillus_leucophaeus
FBgn0036964	FRG1	81	51.869	ENSMAMG00000012406	frg1	84	51.869	Mastacembelus_armatus
FBgn0036964	FRG1	100	47.148	ENSMZEG00005007549	frg1	100	47.148	Maylandia_zebra
FBgn0036964	FRG1	84	49.778	ENSMGAG00000011481	-	88	49.778	Meleagris_gallopavo
FBgn0036964	FRG1	81	51.163	ENSMAUG00000000847	Frg1	100	47.744	Mesocricetus_auratus
FBgn0036964	FRG1	81	51.163	ENSMICG00000046816	FRG1	100	47.744	Microcebus_murinus
FBgn0036964	FRG1	81	47.664	ENSMOCG00000023000	Frg1	82	47.664	Microtus_ochrogaster
FBgn0036964	FRG1	81	48.182	ENSMMOG00000004008	frg1	97	47.234	Mola_mola
FBgn0036964	FRG1	81	50.233	ENSMODG00000019031	-	73	50.233	Monodelphis_domestica
FBgn0036964	FRG1	81	52.804	ENSMALG00000018497	frg1	84	52.804	Monopterus_albus
FBgn0036964	FRG1	81	51.163	MGP_CAROLIEiJ_G0031006	Frg1	100	47.744	Mus_caroli
FBgn0036964	FRG1	81	51.163	ENSMUSG00000031590	Frg1	100	47.744	Mus_musculus
FBgn0036964	FRG1	81	51.163	MGP_PahariEiJ_G0021475	Frg1	83	51.163	Mus_pahari
FBgn0036964	FRG1	81	51.163	MGP_SPRETEiJ_G0032120	Frg1	100	47.744	Mus_spretus
FBgn0036964	FRG1	100	48.106	ENSMPUG00000017962	FRG1	100	47.388	Mustela_putorius_furo
FBgn0036964	FRG1	100	48.106	ENSMLUG00000023179	FRG1	83	51.163	Myotis_lucifugus
FBgn0036964	FRG1	81	51.163	ENSNGAG00000016411	Frg1	100	47.744	Nannospalax_galili
FBgn0036964	FRG1	82	42.326	ENSNBRG00000006806	frg1	78	47.590	Neolamprologus_brichardi
FBgn0036964	FRG1	95	36.220	ENSNLEG00000032333	-	81	42.995	Nomascus_leucogenys
FBgn0036964	FRG1	100	35.985	ENSNLEG00000032846	-	100	44.248	Nomascus_leucogenys
FBgn0036964	FRG1	76	44.059	ENSNLEG00000028874	-	91	44.059	Nomascus_leucogenys
FBgn0036964	FRG1	100	39.925	ENSNLEG00000035849	-	82	43.192	Nomascus_leucogenys
FBgn0036964	FRG1	76	42.574	ENSNLEG00000036059	-	86	42.574	Nomascus_leucogenys
FBgn0036964	FRG1	81	50.698	ENSNLEG00000000930	FRG1	83	50.698	Nomascus_leucogenys
FBgn0036964	FRG1	58	49.020	ENSMEUG00000007509	-	59	49.020	Notamacropus_eugenii
FBgn0036964	FRG1	81	40.930	ENSOPRG00000004722	-	83	40.930	Ochotona_princeps
FBgn0036964	FRG1	81	51.628	ENSODEG00000006458	-	83	51.628	Octodon_degus
FBgn0036964	FRG1	77	43.478	ENSODEG00000006953	-	89	43.415	Octodon_degus
FBgn0036964	FRG1	100	47.348	ENSONIG00000010162	frg1	100	47.348	Oreochromis_niloticus
FBgn0036964	FRG1	65	52.632	ENSOANG00000005659	-	76	52.632	Ornithorhynchus_anatinus
FBgn0036964	FRG1	81	51.628	ENSOCUG00000009038	-	100	48.507	Oryctolagus_cuniculus
FBgn0036964	FRG1	96	44.841	ENSORLG00000008106	frg1	89	44.841	Oryzias_latipes
FBgn0036964	FRG1	100	47.529	ENSORLG00020014355	frg1	100	47.529	Oryzias_latipes_hni
FBgn0036964	FRG1	100	47.529	ENSORLG00015014159	frg1	100	47.529	Oryzias_latipes_hsok
FBgn0036964	FRG1	85	41.518	ENSOMEG00000002468	frg1	68	46.667	Oryzias_melastigma
FBgn0036964	FRG1	100	47.037	ENSOGAG00000005749	-	83	51.163	Otolemur_garnettii
FBgn0036964	FRG1	100	47.191	ENSOARG00000008592	FRG1	100	46.494	Ovis_aries
FBgn0036964	FRG1	65	46.821	ENSPPAG00000043170	-	97	44.037	Pan_paniscus
FBgn0036964	FRG1	96	38.314	ENSPPAG00000043174	-	88	40.265	Pan_paniscus
FBgn0036964	FRG1	100	46.212	ENSPPRG00000019777	-	100	45.865	Panthera_pardus
FBgn0036964	FRG1	100	47.727	ENSPPRG00000025003	-	100	47.015	Panthera_pardus
FBgn0036964	FRG1	100	46.591	ENSPTIG00000006566	-	100	46.241	Panthera_tigris_altaica
FBgn0036964	FRG1	100	47.727	ENSPTIG00000006588	-	100	47.015	Panthera_tigris_altaica
FBgn0036964	FRG1	96	36.614	ENSPTRG00000044710	-	86	40.000	Pan_troglodytes
FBgn0036964	FRG1	96	37.891	ENSPTRG00000050204	-	86	41.546	Pan_troglodytes
FBgn0036964	FRG1	96	43.083	ENSPTRG00000050205	-	100	47.744	Pan_troglodytes
FBgn0036964	FRG1	95	38.889	ENSPTRG00000052363	-	97	43.810	Pan_troglodytes
FBgn0036964	FRG1	96	43.083	ENSPTRG00000016671	-	100	47.744	Pan_troglodytes
FBgn0036964	FRG1	89	37.712	ENSPTRG00000043123	-	83	39.409	Pan_troglodytes
FBgn0036964	FRG1	50	48.120	ENSPANG00000031530	-	65	48.485	Papio_anubis
FBgn0036964	FRG1	100	46.768	ENSPKIG00000024189	frg1	100	45.693	Paramormyrops_kingsleyae
FBgn0036964	FRG1	81	54.206	ENSPSIG00000017971	-	82	54.206	Pelodiscus_sinensis
FBgn0036964	FRG1	98	42.471	ENSPMGG00000019273	frg1	86	48.077	Periophthalmus_magnuspinnatus
FBgn0036964	FRG1	81	51.163	ENSPEMG00000000650	Frg1	83	51.163	Peromyscus_maniculatus_bairdii
FBgn0036964	FRG1	100	46.970	ENSPCIG00000007530	-	57	49.767	Phascolarctos_cinereus
FBgn0036964	FRG1	100	49.049	ENSPFOG00000006721	frg1	100	49.248	Poecilia_formosa
FBgn0036964	FRG1	100	49.049	ENSPMEG00000013816	frg1	100	49.049	Poecilia_mexicana
FBgn0036964	FRG1	100	48.289	ENSPREG00000000097	frg1	100	48.289	Poecilia_reticulata
FBgn0036964	FRG1	53	47.887	ENSPPYG00000029810	-	97	47.887	Pongo_abelii
FBgn0036964	FRG1	60	45.283	ENSPPYG00000011275	-	87	45.283	Pongo_abelii
FBgn0036964	FRG1	95	44.574	ENSPCAG00000014953	-	82	47.783	Procavia_capensis
FBgn0036964	FRG1	70	44.324	ENSPCOG00000022726	FRG1	100	43.386	Propithecus_coquereli
FBgn0036964	FRG1	100	38.636	ENSPVAG00000010551	FRG1	83	39.535	Pteropus_vampyrus
FBgn0036964	FRG1	65	50.292	ENSPNYG00000015209	frg1	73	50.292	Pundamilia_nyererei
FBgn0036964	FRG1	100	46.388	ENSPNAG00000013259	frg1	88	50.935	Pygocentrus_nattereri
FBgn0036964	FRG1	81	50.698	ENSRNOG00000009846	Frg1	100	47.744	Rattus_norvegicus
FBgn0036964	FRG1	69	46.154	ENSRBIG00000042219	-	74	46.927	Rhinopithecus_bieti
FBgn0036964	FRG1	80	45.755	ENSRROG00000032084	-	94	41.905	Rhinopithecus_roxellana
FBgn0036964	FRG1	81	48.131	ENSRROG00000015523	FRG1	82	48.131	Rhinopithecus_roxellana
FBgn0036964	FRG1	100	47.348	ENSSBOG00000034175	FRG1	100	46.992	Saimiri_boliviensis_boliviensis
FBgn0036964	FRG1	100	47.348	ENSSHAG00000005886	-	83	50.233	Sarcophilus_harrisii
FBgn0036964	FRG1	97	46.667	ENSSFOG00015021361	frg1	99	46.667	Scleropages_formosus
FBgn0036964	FRG1	81	50.230	ENSSMAG00000001213	frg1	100	46.442	Scophthalmus_maximus
FBgn0036964	FRG1	100	47.529	ENSSDUG00000018886	frg1	100	47.529	Seriola_dumerili
FBgn0036964	FRG1	100	47.529	ENSSLDG00000024191	frg1	100	47.529	Seriola_lalandi_dorsalis
FBgn0036964	FRG1	63	46.988	ENSSARG00000002471	-	88	46.988	Sorex_araneus
FBgn0036964	FRG1	100	48.669	ENSSPUG00000017326	-	85	53.271	Sphenodon_punctatus
FBgn0036964	FRG1	100	46.241	ENSSPAG00000013294	frg1	85	51.869	Stegastes_partitus
FBgn0036964	FRG1	81	50.698	ENSSSCG00000006996	FRG1	100	47.015	Sus_scrofa
FBgn0036964	FRG1	81	50.467	ENSTGUG00000007028	-	88	49.333	Taeniopygia_guttata
FBgn0036964	FRG1	81	49.065	ENSTRUG00000016208	frg1	84	49.065	Takifugu_rubripes
FBgn0036964	FRG1	84	50.446	ENSTNIG00000007128	frg1	89	49.782	Tetraodon_nigroviridis
FBgn0036964	FRG1	81	50.233	ENSTBEG00000014491	-	100	46.992	Tupaia_belangeri
FBgn0036964	FRG1	81	34.742	ENSTBEG00000012789	-	99	33.333	Tupaia_belangeri
FBgn0036964	FRG1	76	32.323	ENSTBEG00000017605	-	99	31.313	Tupaia_belangeri
FBgn0036964	FRG1	100	48.106	ENSTTRG00000003429	FRG1	83	51.163	Tursiops_truncatus
FBgn0036964	FRG1	96	44.664	ENSUAMG00000012123	-	85	49.510	Ursus_americanus
FBgn0036964	FRG1	100	48.106	ENSUMAG00000021119	FRG1	100	47.388	Ursus_maritimus
FBgn0036964	FRG1	81	51.163	ENSVPAG00000011977	-	90	51.163	Vicugna_pacos
FBgn0036964	FRG1	81	49.302	ENSVPAG00000000616	FRG1	100	46.269	Vicugna_pacos
FBgn0036964	FRG1	81	51.174	ENSVVUG00000007181	-	77	51.174	Vulpes_vulpes
FBgn0036964	FRG1	81	51.869	ENSXETG00000012470	frg1	100	48.485	Xenopus_tropicalis
FBgn0036964	FRG1	100	46.768	ENSXCOG00000005312	frg1	85	51.869	Xiphophorus_couchianus
FBgn0036964	FRG1	100	48.289	ENSXMAG00000007751	frg1	100	49.621	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005737	cytoplasm	26942723.	IDA	Component
GO:0031936	negative regulation of chromatin silencing	23720823.	IGI	Process
GO:0051015	actin filament binding	21873635.	IBA	Function
GO:0055120	striated muscle dense body	21873635.	IBA	Component
GO:0070511	negative regulation of histone H4-K20 methylation	23720823.	IMP	Process
GO:0071013	catalytic step 2 spliceosome	21873635.	IBA	Component