EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0037220 (Gene tree)
Gene ID: 40529
Gene Symbol: CG14641
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Minus strand
Length: 1564 bases
Position: chr3R:4230779-4232342
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0078624	RRM_1	PF00076.22	3.1e-12	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0078985	-	1564	-	FBpp0078624	418 (aa)	-	Q95RB1

Gene Model

Click here to download FBgn0037220's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0037220's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0037220	CG14641	99	57.757	ENSG00000086589	RBM22	100	71.505	Homo_sapiens
FBgn0037220	CG14641	99	54.524	ENSAPOG00000010338	rbm22	98	57.241	Acanthochromis_polyacanthus
FBgn0037220	CG14641	99	57.757	ENSAMEG00000004544	RBM22	98	56.613	Ailuropoda_melanoleuca
FBgn0037220	CG14641	99	49.543	ENSACIG00000016372	rbm22	82	57.660	Amphilophus_citrinellus
FBgn0037220	CG14641	99	54.524	ENSAOCG00000007179	rbm22	98	57.241	Amphiprion_ocellaris
FBgn0037220	CG14641	99	54.524	ENSAPEG00000016689	rbm22	98	57.241	Amphiprion_percula
FBgn0037220	CG14641	99	54.292	ENSATEG00000008286	rbm22	82	63.636	Anabas_testudineus
FBgn0037220	CG14641	98	56.416	ENSAPLG00000016408	RBM22	97	54.824	Anas_platyrhynchos
FBgn0037220	CG14641	99	57.518	ENSACAG00000014750	RBM22	98	56.148	Anolis_carolinensis
FBgn0037220	CG14641	99	57.279	ENSANAG00000033743	-	98	56.381	Aotus_nancymaae
FBgn0037220	CG14641	91	55.959	ENSANAG00000019688	-	98	54.974	Aotus_nancymaae
FBgn0037220	CG14641	99	54.524	ENSACLG00000008863	rbm22	82	63.920	Astatotilapia_calliptera
FBgn0037220	CG14641	99	55.349	ENSAMXG00000038080	rbm22	90	52.956	Astyanax_mexicanus
FBgn0037220	CG14641	78	65.257	ENSAMXG00000018529	-	85	65.257	Astyanax_mexicanus
FBgn0037220	CG14641	99	57.757	ENSBTAG00000030366	RBM22	98	56.613	Bos_taurus
FBgn0037220	CG14641	74	58.675	WBGene00011722	rbm-22	78	58.675	Caenorhabditis_elegans
FBgn0037220	CG14641	96	56.965	ENSCJAG00000013247	-	86	57.214	Callithrix_jacchus
FBgn0037220	CG14641	99	57.279	ENSCJAG00000020963	RBM22	98	56.381	Callithrix_jacchus
FBgn0037220	CG14641	99	57.482	ENSCAFG00000018082	RBM22	98	56.351	Canis_familiaris
FBgn0037220	CG14641	99	57.757	ENSCAFG00020023671	RBM22	98	56.613	Canis_lupus_dingo
FBgn0037220	CG14641	99	57.757	ENSCHIG00000015561	RBM22	98	56.613	Capra_hircus
FBgn0037220	CG14641	87	50.270	ENSTSYG00000037586	-	98	49.211	Carlito_syrichta
FBgn0037220	CG14641	99	57.757	ENSTSYG00000003939	-	98	56.613	Carlito_syrichta
FBgn0037220	CG14641	92	56.010	ENSCAPG00000002598	RBM22	79	62.813	Cavia_aperea
FBgn0037220	CG14641	99	57.757	ENSCPOG00000001946	RBM22	98	56.613	Cavia_porcellus
FBgn0037220	CG14641	99	57.279	ENSCCAG00000033546	RBM22	98	56.381	Cebus_capucinus
FBgn0037220	CG14641	99	57.757	ENSCATG00000042133	RBM22	98	56.613	Cercocebus_atys
FBgn0037220	CG14641	99	57.757	ENSCLAG00000010842	-	98	56.613	Chinchilla_lanigera
FBgn0037220	CG14641	99	47.706	ENSCLAG00000007106	-	83	53.693	Chinchilla_lanigera
FBgn0037220	CG14641	78	50.909	ENSCLAG00000014221	-	78	49.300	Chinchilla_lanigera
FBgn0037220	CG14641	78	68.210	ENSCSAG00000019006	-	89	64.873	Chlorocebus_sabaeus
FBgn0037220	CG14641	99	53.829	ENSCHOG00000013522	-	88	57.750	Choloepus_hoffmanni
FBgn0037220	CG14641	69	67.247	ENSCHOG00000004192	-	96	67.247	Choloepus_hoffmanni
FBgn0037220	CG14641	99	57.279	ENSCHOG00000001041	-	98	56.148	Choloepus_hoffmanni
FBgn0037220	CG14641	73	65.161	ENSCING00000005843	zf(c3h)-12	75	65.161	Ciona_intestinalis
FBgn0037220	CG14641	99	54.481	ENSCSAVG00000009145	-	95	57.107	Ciona_savignyi
FBgn0037220	CG14641	99	57.757	ENSCANG00000025232	RBM22	98	56.613	Colobus_angolensis_palliatus
FBgn0037220	CG14641	99	57.757	ENSCGRG00001015110	Rbm22	98	56.613	Cricetulus_griseus_chok1gshd
FBgn0037220	CG14641	95	56.931	ENSCGRG00000011751	Rbm22	95	55.797	Cricetulus_griseus_crigri
FBgn0037220	CG14641	76	66.772	ENSCSEG00000010790	rbm22	82	63.636	Cynoglossus_semilaevis
FBgn0037220	CG14641	99	54.128	ENSCVAG00000010670	rbm22	82	62.216	Cyprinodon_variegatus
FBgn0037220	CG14641	75	67.834	ENSDARG00000010238	rbm22	90	59.845	Danio_rerio
FBgn0037220	CG14641	99	57.757	ENSDNOG00000011166	RBM22	98	56.613	Dasypus_novemcinctus
FBgn0037220	CG14641	99	43.198	ENSDORG00000005329	Rbm22	98	39.675	Dipodomys_ordii
FBgn0037220	CG14641	69	75.926	ENSEBUG00000016742	-	98	82.979	Eptatretus_burgeri
FBgn0037220	CG14641	99	57.757	ENSEASG00005002681	RBM22	98	56.613	Equus_asinus_asinus
FBgn0037220	CG14641	78	68.210	ENSECAG00000014940	RBM22	76	64.873	Equus_caballus
FBgn0037220	CG14641	76	67.405	ENSEEUG00000005638	-	98	55.035	Erinaceus_europaeus
FBgn0037220	CG14641	76	51.266	ENSEEUG00000009778	-	98	43.256	Erinaceus_europaeus
FBgn0037220	CG14641	76	68.354	ENSELUG00000001106	rbm22	90	60.202	Esox_lucius
FBgn0037220	CG14641	99	57.757	ENSFCAG00000018845	RBM22	98	56.613	Felis_catus
FBgn0037220	CG14641	99	57.757	ENSFALG00000008051	RBM22	98	56.552	Ficedula_albicollis
FBgn0037220	CG14641	99	57.757	ENSFDAG00000020067	RBM22	98	56.613	Fukomys_damarensis
FBgn0037220	CG14641	74	68.065	ENSFHEG00000014032	rbm22	82	63.636	Fundulus_heteroclitus
FBgn0037220	CG14641	76	67.089	ENSGMOG00000010186	rbm22	99	57.209	Gadus_morhua
FBgn0037220	CG14641	74	65.484	ENSGALG00000004555	RBM22	98	56.322	Gallus_gallus
FBgn0037220	CG14641	74	68.065	ENSGAFG00000008621	rbm22	82	63.636	Gambusia_affinis
FBgn0037220	CG14641	99	54.861	ENSGACG00000018027	rbm22	82	63.636	Gasterosteus_aculeatus
FBgn0037220	CG14641	99	57.757	ENSGGOG00000012947	RBM22	98	56.613	Gorilla_gorilla
FBgn0037220	CG14641	99	54.524	ENSHBUG00000002941	rbm22	82	63.920	Haplochromis_burtoni
FBgn0037220	CG14641	99	57.757	ENSHGLG00000008488	RBM22	98	56.613	Heterocephalus_glaber_female
FBgn0037220	CG14641	97	58.151	ENSHGLG00100006872	RBM22	97	56.974	Heterocephalus_glaber_male
FBgn0037220	CG14641	74	67.419	ENSHCOG00000016334	rbm22	93	61.413	Hippocampus_comes
FBgn0037220	CG14641	74	69.355	ENSIPUG00000019751	rbm22	91	60.668	Ictalurus_punctatus
FBgn0037220	CG14641	78	55.247	ENSSTOG00000027197	RBM22	81	52.975	Ictidomys_tridecemlineatus
FBgn0037220	CG14641	76	57.278	ENSSTOG00000029346	-	81	54.701	Ictidomys_tridecemlineatus
FBgn0037220	CG14641	99	57.757	ENSJJAG00000009565	Rbm22	98	56.613	Jaculus_jaculus
FBgn0037220	CG14641	76	67.089	ENSKMAG00000004354	rbm22	82	63.920	Kryptolebias_marmoratus
FBgn0037220	CG14641	99	54.524	ENSLBEG00000027750	rbm22	79	67.089	Labrus_bergylta
FBgn0037220	CG14641	76	69.304	ENSLOCG00000010989	rbm22	98	58.140	Lepisosteus_oculatus
FBgn0037220	CG14641	99	57.757	ENSLAFG00000006638	RBM22	98	56.613	Loxodonta_africana
FBgn0037220	CG14641	99	57.757	ENSMFAG00000004034	RBM22	98	56.613	Macaca_fascicularis
FBgn0037220	CG14641	99	57.757	ENSMMUG00000020683	RBM22	98	56.613	Macaca_mulatta
FBgn0037220	CG14641	99	57.757	ENSMNEG00000035500	RBM22	98	56.613	Macaca_nemestrina
FBgn0037220	CG14641	99	57.757	ENSMLEG00000034825	RBM22	98	56.613	Mandrillus_leucophaeus
FBgn0037220	CG14641	99	54.292	ENSMAMG00000007370	rbm22	87	63.636	Mastacembelus_armatus
FBgn0037220	CG14641	99	54.524	ENSMZEG00005013001	rbm22	82	63.920	Maylandia_zebra
FBgn0037220	CG14641	99	57.757	ENSMAUG00000001133	Rbm22	98	56.613	Mesocricetus_auratus
FBgn0037220	CG14641	99	57.757	ENSMICG00000033712	RBM22	98	56.613	Microcebus_murinus
FBgn0037220	CG14641	99	53.699	ENSMOCG00000018311	Rbm22	98	52.668	Microtus_ochrogaster
FBgn0037220	CG14641	76	66.772	ENSMMOG00000003192	rbm22	82	63.636	Mola_mola
FBgn0037220	CG14641	99	53.333	ENSMODG00000006398	-	84	61.864	Monodelphis_domestica
FBgn0037220	CG14641	99	57.279	ENSMODG00000009574	-	98	56.279	Monodelphis_domestica
FBgn0037220	CG14641	76	66.456	ENSMALG00000013964	rbm22	82	63.352	Monopterus_albus
FBgn0037220	CG14641	99	57.757	MGP_CAROLIEiJ_G0022307	Rbm22	98	56.613	Mus_caroli
FBgn0037220	CG14641	99	57.757	ENSMUSG00000024604	Rbm22	98	56.613	Mus_musculus
FBgn0037220	CG14641	99	57.757	MGP_PahariEiJ_G0019037	Rbm22	98	56.613	Mus_pahari
FBgn0037220	CG14641	99	57.757	MGP_SPRETEiJ_G0023219	Rbm22	98	56.613	Mus_spretus
FBgn0037220	CG14641	99	57.757	ENSMPUG00000013760	RBM22	98	56.613	Mustela_putorius_furo
FBgn0037220	CG14641	77	67.077	ENSMLUG00000003461	-	84	64.205	Myotis_lucifugus
FBgn0037220	CG14641	99	57.757	ENSMLUG00000009040	RBM22	98	56.613	Myotis_lucifugus
FBgn0037220	CG14641	99	57.757	ENSNGAG00000018233	Rbm22	98	56.613	Nannospalax_galili
FBgn0037220	CG14641	74	63.226	ENSNBRG00000010458	rbm22	92	59.375	Neolamprologus_brichardi
FBgn0037220	CG14641	99	57.757	ENSNLEG00000010397	-	98	56.613	Nomascus_leucogenys
FBgn0037220	CG14641	72	52.805	ENSMEUG00000001573	-	72	52.805	Notamacropus_eugenii
FBgn0037220	CG14641	78	64.198	ENSMEUG00000009348	-	83	61.080	Notamacropus_eugenii
FBgn0037220	CG14641	79	55.287	ENSOPRG00000016612	-	81	54.599	Ochotona_princeps
FBgn0037220	CG14641	99	57.518	ENSODEG00000005016	RBM22	98	56.381	Octodon_degus
FBgn0037220	CG14641	81	63.739	ENSONIG00000013049	rbm22	83	63.739	Oreochromis_niloticus
FBgn0037220	CG14641	99	56.161	ENSOANG00000002314	RBM22	98	55.196	Ornithorhynchus_anatinus
FBgn0037220	CG14641	99	57.757	ENSOCUG00000011532	RBM22	98	56.613	Oryctolagus_cuniculus
FBgn0037220	CG14641	99	55.530	ENSORLG00000004975	rbm22	82	62.857	Oryzias_latipes
FBgn0037220	CG14641	99	55.530	ENSORLG00020012969	rbm22	82	62.857	Oryzias_latipes_hni
FBgn0037220	CG14641	99	55.530	ENSORLG00015022508	rbm22	82	62.857	Oryzias_latipes_hsok
FBgn0037220	CG14641	99	55.792	ENSOMEG00000004904	rbm22	82	62.857	Oryzias_melastigma
FBgn0037220	CG14641	73	70.033	ENSOGAG00000011086	RBM22	84	63.739	Otolemur_garnettii
FBgn0037220	CG14641	99	57.720	ENSOARG00000007633	RBM22	98	56.582	Ovis_aries
FBgn0037220	CG14641	99	57.757	ENSPPAG00000034432	RBM22	98	56.613	Pan_paniscus
FBgn0037220	CG14641	99	57.757	ENSPPRG00000011577	RBM22	98	56.613	Panthera_pardus
FBgn0037220	CG14641	99	57.757	ENSPTIG00000004453	RBM22	98	56.613	Panthera_tigris_altaica
FBgn0037220	CG14641	99	57.757	ENSPTRG00000017423	RBM22	98	56.613	Pan_troglodytes
FBgn0037220	CG14641	99	57.757	ENSPANG00000011297	RBM22	98	56.613	Papio_anubis
FBgn0037220	CG14641	74	68.387	ENSPKIG00000019326	rbm22	90	59.091	Paramormyrops_kingsleyae
FBgn0037220	CG14641	76	68.987	ENSPKIG00000010315	rbm22	83	64.489	Paramormyrops_kingsleyae
FBgn0037220	CG14641	99	57.757	ENSPSIG00000012818	RBM22	98	56.193	Pelodiscus_sinensis
FBgn0037220	CG14641	74	67.097	ENSPMGG00000017638	rbm22	88	60.490	Periophthalmus_magnuspinnatus
FBgn0037220	CG14641	99	57.518	ENSPEMG00000001753	Rbm22	98	56.381	Peromyscus_maniculatus_bairdii
FBgn0037220	CG14641	52	65.899	ENSPMAG00000007317	-	63	65.899	Petromyzon_marinus
FBgn0037220	CG14641	99	54.756	ENSPFOG00000005625	rbm22	82	63.818	Poecilia_formosa
FBgn0037220	CG14641	99	55.792	ENSPLAG00000006344	rbm22	82	63.533	Poecilia_latipinna
FBgn0037220	CG14641	75	62.739	ENSPMEG00000007992	rbm22	81	62.342	Poecilia_mexicana
FBgn0037220	CG14641	75	67.197	ENSPREG00000003546	rbm22	82	63.818	Poecilia_reticulata
FBgn0037220	CG14641	99	57.757	ENSPPYG00000015955	RBM22	98	56.613	Pongo_abelii
FBgn0037220	CG14641	78	54.012	ENSPCAG00000015091	RBM22	93	51.841	Procavia_capensis
FBgn0037220	CG14641	99	57.757	ENSPVAG00000014231	RBM22	98	56.613	Pteropus_vampyrus
FBgn0037220	CG14641	76	62.342	ENSPNYG00000000380	rbm22	92	59.659	Pundamilia_nyererei
FBgn0037220	CG14641	76	67.722	ENSPNAG00000002687	rbm22	91	59.897	Pygocentrus_nattereri
FBgn0037220	CG14641	75	69.745	ENSPNAG00000010001	-	91	61.399	Pygocentrus_nattereri
FBgn0037220	CG14641	99	57.279	ENSRNOG00000019235	Rbm22	98	56.381	Rattus_norvegicus
FBgn0037220	CG14641	99	57.757	ENSRBIG00000041683	RBM22	98	56.613	Rhinopithecus_bieti
FBgn0037220	CG14641	99	57.757	ENSRROG00000041637	RBM22	98	56.613	Rhinopithecus_roxellana
FBgn0037220	CG14641	99	57.041	ENSSBOG00000035400	-	98	56.148	Saimiri_boliviensis_boliviensis
FBgn0037220	CG14641	99	57.041	ENSSHAG00000017734	-	98	56.047	Sarcophilus_harrisii
FBgn0037220	CG14641	99	57.009	ENSSFOG00015022259	rbm22	98	59.070	Scleropages_formosus
FBgn0037220	CG14641	99	53.919	ENSSFOG00015014955	rbm22	83	64.773	Scleropages_formosus
FBgn0037220	CG14641	76	67.405	ENSSMAG00000002921	rbm22	82	64.205	Scophthalmus_maximus
FBgn0037220	CG14641	76	67.089	ENSSDUG00000003846	rbm22	82	63.920	Seriola_dumerili
FBgn0037220	CG14641	76	67.089	ENSSLDG00000003804	rbm22	82	63.920	Seriola_lalandi_dorsalis
FBgn0037220	CG14641	99	57.995	ENSSPUG00000003986	RBM22	98	56.422	Sphenodon_punctatus
FBgn0037220	CG14641	99	54.060	ENSSPAG00000000383	rbm22	98	56.782	Stegastes_partitus
FBgn0037220	CG14641	99	57.279	ENSSSCG00000023231	RBM22	98	56.148	Sus_scrofa
FBgn0037220	CG14641	99	57.757	ENSTGUG00000000850	RBM22	98	56.552	Taeniopygia_guttata
FBgn0037220	CG14641	99	55.632	ENSTRUG00000004724	rbm22	82	64.672	Takifugu_rubripes
FBgn0037220	CG14641	78	54.012	ENSTBEG00000005617	RBM22	98	45.940	Tupaia_belangeri
FBgn0037220	CG14641	99	57.757	ENSTTRG00000012778	RBM22	98	56.613	Tursiops_truncatus
FBgn0037220	CG14641	99	57.757	ENSUAMG00000025133	RBM22	98	56.613	Ursus_americanus
FBgn0037220	CG14641	99	57.757	ENSUMAG00000003651	RBM22	98	56.613	Ursus_maritimus
FBgn0037220	CG14641	99	57.757	ENSVVUG00000007193	RBM22	98	56.613	Vulpes_vulpes
FBgn0037220	CG14641	77	68.438	ENSXETG00000020435	rbm22	84	64.957	Xenopus_tropicalis
FBgn0037220	CG14641	81	63.158	ENSXCOG00000003316	rbm22	83	63.158	Xiphophorus_couchianus
FBgn0037220	CG14641	74	68.065	ENSXMAG00000008681	rbm22	82	63.636	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	15492211.	HMP	Process
GO:0000387	spliceosomal snRNP assembly	21873635.	IBA	Process
GO:0000398	mRNA splicing, via spliceosome	18981222.	IC	Process
GO:0000974	Prp19 complex	21873635.	IBA	Component
GO:0003729	mRNA binding	10908586.	ISS	Function
GO:0005634	nucleus	15492211.	IC	Component
GO:0017070	U6 snRNA binding	21873635.	IBA	Function
GO:0036002	pre-mRNA binding	21873635.	IBA	Function
GO:0046872	metal ion binding	-	IEA	Function
GO:0071006	U2-type catalytic step 1 spliceosome	21873635.	IBA	Component
GO:0071007	U2-type catalytic step 2 spliceosome	21873635.	IBA	Component
GO:0071011	precatalytic spliceosome	18981222.	HDA	Component
GO:0071013	catalytic step 2 spliceosome	18981222.	HDA	Component