EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0037342 (Gene tree)
Gene ID: 40673
Gene Symbol: CG2931
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 1114 bases
Position: chr3R:5567502-5568615
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0078402	RRM_1	PF00076.22	1.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0078753	-	1114	-	FBpp0078402	302 (aa)	-	Q9VND7

Gene Model

Click here to download FBgn0037342's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0037342's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0037342	CG2931	71	39.245	ENSCSEG00000010248	rbm42	68	42.960	Cynoglossus_semilaevis
FBgn0037342	CG2931	93	36.810	ENSGACG00000004170	rbm42	95	38.757	Gasterosteus_aculeatus
FBgn0037342	CG2931	68	44.762	ENSORLG00020022507	rbm42	54	46.119	Oryzias_latipes_hni
FBgn0037342	CG2931	94	38.462	ENSPMGG00000003569	rbm42	98	38.961	Periophthalmus_magnuspinnatus
FBgn0037342	CG2931	93	32.976	ENSPREG00000018102	rbm42	97	36.164	Poecilia_reticulata
FBgn0037342	CG2931	81	41.353	ENSXETG00000017599	rbm42	52	45.327	Xenopus_tropicalis
FBgn0037342	CG2931	93	32.800	ENSXMAG00000012827	rbm42	97	36.785	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	18981222.	IC	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003729	mRNA binding	10908586.	ISS	Function
GO:0071011	precatalytic spliceosome	18981222.	HDA	Component
GO:0071013	catalytic step 2 spliceosome	18981222.	HDA	Component
GO:1990904	ribonucleoprotein complex	21873635.	IBA	Component