EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
FBgn0037351 (Gene tree)
Gene ID
40687
Gene Symbol
RpL13A
Alias
-
Full Name
Ribosomal protein L13A
Gene Type
protein_coding
Species
Drosophila_melanogaster
Status
confidence
Strand
Plus strand
Length
1474 bases
Position
chr3R:5624474-5625947
Accession
FBgn0037351
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
FBpp0078354Ribosomal_L13PF00572.184.3e-0911
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27378189Global changes of the RNA bound proteome during the maternal-to-zygotic transition in DrosophilaIC & embryos.MZT2016 Jul 5Sysoev VODOI: 10.1038/ncomms12128
27197210The mRNA-bound proteome of the early fly embryoIC & embryos2016 Apr 28Wessels HHDOI: 10.1101/gr.200386.115
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
FBtr0335214-903-FBpp0307201101 (aa)-A0A0B4KFM7
FBtr0078705-722-FBpp0078354205 (aa)-Q9VNE9
Gene Model
Click here to download FBgn0037351's gene model file
Protein-Protein Interaction (PPI)

Clik here to download FBgn0037351's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
FBgn0037351RpL13A9757.789ENSG00000142541RPL13A9857.789Homo_sapiens
FBgn0037351RpL13A9956.931ENSAPOG00000014084rpl13a9956.931Acanthochromis_polyacanthus
FBgn0037351RpL13A9857.500ENSAMEG00000014027RPL13A9957.500Ailuropoda_melanoleuca
FBgn0037351RpL13A9954.950ENSACIG00000004871rpl13a9858.462Amphilophus_citrinellus
FBgn0037351RpL13A9956.436ENSAOCG00000002123rpl13a9956.436Amphiprion_ocellaris
FBgn0037351RpL13A9956.436ENSAPEG00000018777rpl13a9956.436Amphiprion_percula
FBgn0037351RpL13A9957.426ENSATEG00000012828rpl13a9957.426Anabas_testudineus
FBgn0037351RpL13A9659.694ENSACAG00000017279RPL13A9759.694Anolis_carolinensis
FBgn0037351RpL13A6746.528ENSANAG00000037443-9746.528Aotus_nancymaae
FBgn0037351RpL13A9757.789ENSANAG00000030530RPL13A9857.789Aotus_nancymaae
FBgn0037351RpL13A6853.957ENSANAG00000013769-9853.957Aotus_nancymaae
FBgn0037351RpL13A8953.297ENSANAG00000021423-9453.297Aotus_nancymaae
FBgn0037351RpL13A9649.239ENSANAG00000020868-9649.239Aotus_nancymaae
FBgn0037351RpL13A9956.931ENSACLG00000016552rpl13a9956.931Astatotilapia_calliptera
FBgn0037351RpL13A9956.436ENSAMXG00000033532rpl13a9956.436Astyanax_mexicanus
FBgn0037351RpL13A9858.500ENSBTAG00000005296RPL13A9958.500Bos_taurus
FBgn0037351RpL13A9853.234WBGene00004428rpl-169953.234Caenorhabditis_elegans
FBgn0037351RpL13A8057.558ENSCJAG00000008837-9757.558Callithrix_jacchus
FBgn0037351RpL13A9757.789ENSCJAG00000000072-9857.789Callithrix_jacchus
FBgn0037351RpL13A9755.276ENSCJAG00000046649-9855.276Callithrix_jacchus
FBgn0037351RpL13A9756.281ENSCJAG00000040678-9856.281Callithrix_jacchus
FBgn0037351RpL13A9640.609ENSCAFG00000003946-9640.609Canis_familiaris
FBgn0037351RpL13A9857.500ENSCAFG00000029892RPL13A9957.500Canis_familiaris
FBgn0037351RpL13A9857.500ENSCAFG00020024917-9957.500Canis_lupus_dingo
FBgn0037351RpL13A9856.000ENSCHIG00000012581-9856.000Capra_hircus
FBgn0037351RpL13A9858.500ENSCHIG00000021732-9959.091Capra_hircus
FBgn0037351RpL13A9957.843ENSTSYG00000008791-9957.500Carlito_syrichta
FBgn0037351RpL13A8547.126ENSTSYG00000028115-9544.162Carlito_syrichta
FBgn0037351RpL13A9758.081ENSCAPG00000007267RPL13A8671.930Cavia_aperea
FBgn0037351RpL13A9857.500ENSCPOG00000012417RPL13A8671.304Cavia_porcellus
FBgn0037351RpL13A6165.600ENSCPOG00000023083-6262.411Cavia_porcellus
FBgn0037351RpL13A6666.667ENSCCAG00000029220-9366.667Cebus_capucinus
FBgn0037351RpL13A6663.704ENSCCAG00000020555-9763.704Cebus_capucinus
FBgn0037351RpL13A9354.974ENSCCAG00000034479-9554.974Cebus_capucinus
FBgn0037351RpL13A9757.789ENSCCAG00000022898RPL13A9857.789Cebus_capucinus
FBgn0037351RpL13A9757.789ENSCATG00000011576RPL13A9857.789Cercocebus_atys
FBgn0037351RpL13A9857.000ENSCLAG00000012323RPL13A9957.000Chinchilla_lanigera
FBgn0037351RpL13A9756.784ENSCSAG00000019054-9856.784Chlorocebus_sabaeus
FBgn0037351RpL13A9659.184ENSCPBG00000014922RPL13A9159.487Chrysemys_picta_bellii
FBgn0037351RpL13A9452.332ENSCING00000014892-9452.332Ciona_intestinalis
FBgn0037351RpL13A9452.850ENSCSAVG00000000666-9452.850Ciona_savignyi
FBgn0037351RpL13A9756.784ENSCANG00000000304-9856.784Colobus_angolensis_palliatus
FBgn0037351RpL13A9757.789ENSCANG00000040885-9857.789Colobus_angolensis_palliatus
FBgn0037351RpL13A7755.280ENSCANG00000018732-9855.280Colobus_angolensis_palliatus
FBgn0037351RpL13A9758.586ENSCGRG00001018651-9858.291Cricetulus_griseus_chok1gshd
FBgn0037351RpL13A9758.586ENSCGRG00000005890-8670.435Cricetulus_griseus_crigri
FBgn0037351RpL13A9652.792ENSCSEG00000002640rpl13a9752.500Cynoglossus_semilaevis
FBgn0037351RpL13A9949.010ENSCVAG00000011043rpl13a9849.010Cyprinodon_variegatus
FBgn0037351RpL13A9956.436ENSDARG00000044093rpl13a9956.436Danio_rerio
FBgn0037351RpL13A9857.000ENSDNOG00000035370-9957.000Dasypus_novemcinctus
FBgn0037351RpL13A9758.794ENSDORG00000012194-9858.794Dipodomys_ordii
FBgn0037351RpL13A9654.592ENSETEG00000005732-9754.592Echinops_telfairi
FBgn0037351RpL13A6369.231ENSETEG00000017076-6469.231Echinops_telfairi
FBgn0037351RpL13A9955.610ENSEBUG00000007234rpl13a9955.610Eptatretus_burgeri
FBgn0037351RpL13A9658.376ENSEASG00005005007RPL13A8558.376Equus_asinus_asinus
FBgn0037351RpL13A9857.500ENSECAG00000015832RPL13A9958.081Equus_caballus
FBgn0037351RpL13A7256.081ENSEEUG00000014071RPL13A7356.081Erinaceus_europaeus
FBgn0037351RpL13A9956.436ENSELUG00000014577rpl13a9956.436Esox_lucius
FBgn0037351RpL13A9757.286ENSFCAG00000009194RPL13A9857.286Felis_catus
FBgn0037351RpL13A9857.500ENSFDAG00000016892RPL13A8671.304Fukomys_damarensis
FBgn0037351RpL13A9956.436ENSFHEG00000004165rpl13a10056.098Fundulus_heteroclitus
FBgn0037351RpL13A9957.921ENSGMOG00000010791rpl13a9457.921Gadus_morhua
FBgn0037351RpL13A9957.426ENSGAFG00000007578rpl13a9957.426Gambusia_affinis
FBgn0037351RpL13A9858.000ENSGACG00000009310rpl13a9958.000Gasterosteus_aculeatus
FBgn0037351RpL13A9354.688ENSGAGG00000002437RPL13A7454.688Gopherus_agassizii
FBgn0037351RpL13A6663.704ENSGGOG00000039250-8263.704Gorilla_gorilla
FBgn0037351RpL13A6465.909ENSGGOG00000039904-7065.909Gorilla_gorilla
FBgn0037351RpL13A9757.789ENSGGOG00000002932RPL13A9857.789Gorilla_gorilla
FBgn0037351RpL13A9757.286ENSGGOG00000023324-9857.286Gorilla_gorilla
FBgn0037351RpL13A9956.931ENSHBUG00000023575rpl13a9956.931Haplochromis_burtoni
FBgn0037351RpL13A9857.500ENSHGLG00000010070RPL13A10057.789Heterocephalus_glaber_female
FBgn0037351RpL13A9857.500ENSHGLG00100010359RPL13A8671.304Heterocephalus_glaber_male
FBgn0037351RpL13A9956.436ENSHCOG00000007902rpl13a9957.360Hippocampus_comes
FBgn0037351RpL13A10057.561ENSIPUG00000014098rpl13a9757.561Ictalurus_punctatus
FBgn0037351RpL13A9758.081ENSSTOG00000021558RPL13A9958.081Ictidomys_tridecemlineatus
FBgn0037351RpL13A9758.291ENSJJAG00000000343-8671.304Jaculus_jaculus
FBgn0037351RpL13A9956.931ENSKMAG00000009039rpl13a9956.931Kryptolebias_marmoratus
FBgn0037351RpL13A9956.931ENSLBEG00000005434rpl13a9956.931Labrus_bergylta
FBgn0037351RpL13A9653.535ENSLACG00000019092RPL13A9553.535Latimeria_chalumnae
FBgn0037351RpL13A9956.436ENSLOCG00000004388rpl13a9956.436Lepisosteus_oculatus
FBgn0037351RpL13A9658.163ENSLAFG00000016213RPL13A9758.163Loxodonta_africana
FBgn0037351RpL13A9554.500ENSMFAG00000002765-9654.500Macaca_fascicularis
FBgn0037351RpL13A9753.266ENSMFAG00000003121-9853.266Macaca_fascicularis
FBgn0037351RpL13A9757.789ENSMFAG00000001097-9857.789Macaca_fascicularis
FBgn0037351RpL13A9554.500ENSMMUG00000009018-9654.500Macaca_mulatta
FBgn0037351RpL13A9758.081ENSMMUG00000007551RPL13A9858.081Macaca_mulatta
FBgn0037351RpL13A9757.789ENSMNEG00000034977RPL13A9857.789Macaca_nemestrina
FBgn0037351RpL13A5671.930ENSMLEG00000038132-9771.930Mandrillus_leucophaeus
FBgn0037351RpL13A9957.921ENSMAMG00000007425rpl13a8557.921Mastacembelus_armatus
FBgn0037351RpL13A9956.931ENSMZEG00005004952rpl13a9956.931Maylandia_zebra
FBgn0037351RpL13A9456.250ENSMAUG00000020351-9456.250Mesocricetus_auratus
FBgn0037351RpL13A9758.586ENSMAUG00000016402-9858.586Mesocricetus_auratus
FBgn0037351RpL13A9950.990ENSMAUG00000012558-9950.990Mesocricetus_auratus
FBgn0037351RpL13A8947.253ENSMICG00000043457-9447.253Microcebus_murinus
FBgn0037351RpL13A9857.500ENSMICG00000009318-9957.500Microcebus_murinus
FBgn0037351RpL13A9757.789ENSMOCG00000002774-8670.435Microtus_ochrogaster
FBgn0037351RpL13A8752.514ENSMOCG00000016427-9352.514Microtus_ochrogaster
FBgn0037351RpL13A9756.500ENSMMOG00000010248rpl13a9956.500Mola_mola
FBgn0037351RpL13A9956.436ENSMALG00000012804rpl13a9956.436Monopterus_albus
FBgn0037351RpL13A9756.784MGP_CAROLIEiJ_G0029698-9856.784Mus_caroli
FBgn0037351RpL13A9757.286ENSMUSG00000074129Rpl13a9067.669Mus_musculus
FBgn0037351RpL13A9756.784MGP_PahariEiJ_G0012923-9856.784Mus_pahari
FBgn0037351RpL13A9755.779MGP_SPRETEiJ_G0017763-9855.779Mus_spretus
FBgn0037351RpL13A9757.286MGP_SPRETEiJ_G0030796Rpl13a9857.286Mus_spretus
FBgn0037351RpL13A9857.500ENSMPUG00000002604RPL13A9957.500Mustela_putorius_furo
FBgn0037351RpL13A9857.500ENSMLUG00000004945RPL13A9957.500Myotis_lucifugus
FBgn0037351RpL13A9758.586ENSNGAG00000021984-9958.586Nannospalax_galili
FBgn0037351RpL13A9956.931ENSNBRG00000024166rpl13a9956.931Neolamprologus_brichardi
FBgn0037351RpL13A9555.670ENSNLEG00000033213-9755.670Nomascus_leucogenys
FBgn0037351RpL13A9654.271ENSNLEG00000005211RPL13A9654.271Nomascus_leucogenys
FBgn0037351RpL13A9752.764ENSNLEG00000012957-9652.764Nomascus_leucogenys
FBgn0037351RpL13A8252.663ENSMEUG00000005199RPL13A9852.663Notamacropus_eugenii
FBgn0037351RpL13A9753.769ENSOPRG00000001194RPL13A9853.769Ochotona_princeps
FBgn0037351RpL13A9857.500ENSODEG00000020468-9957.500Octodon_degus
FBgn0037351RpL13A9856.500ENSODEG00000020233-9956.500Octodon_degus
FBgn0037351RpL13A9857.500ENSODEG00000016831-8671.304Octodon_degus
FBgn0037351RpL13A9857.000ENSODEG00000019218-9957.000Octodon_degus
FBgn0037351RpL13A9957.426ENSONIG00000003560rpl13a9957.426Oreochromis_niloticus
FBgn0037351RpL13A9657.868ENSOANG00000000828RPL13A9757.868Ornithorhynchus_anatinus
FBgn0037351RpL13A7560.390ENSOCUG00000026592-9560.390Oryctolagus_cuniculus
FBgn0037351RpL13A9957.426ENSORLG00000014599rpl13a8957.426Oryzias_latipes
FBgn0037351RpL13A9957.426ENSORLG00020013090rpl13a8957.426Oryzias_latipes_hni
FBgn0037351RpL13A9957.426ENSORLG00015011634rpl13a9757.500Oryzias_latipes_hsok
FBgn0037351RpL13A9956.931ENSOMEG00000010232rpl13a9056.585Oryzias_melastigma
FBgn0037351RpL13A9654.082ENSOGAG00000026177-9754.082Otolemur_garnettii
FBgn0037351RpL13A9656.345ENSOGAG00000030280-9756.345Otolemur_garnettii
FBgn0037351RpL13A9858.000ENSOGAG00000004625-9958.000Otolemur_garnettii
FBgn0037351RpL13A9445.596ENSOARG00000017798-9545.596Ovis_aries
FBgn0037351RpL13A9858.500ENSOARG00000013169-9858.500Ovis_aries
FBgn0037351RpL13A9858.000ENSOARG00000020159-9958.000Ovis_aries
FBgn0037351RpL13A9755.779ENSPPAG00000023659-9855.779Pan_paniscus
FBgn0037351RpL13A6465.152ENSPPAG00000006023-6965.152Pan_paniscus
FBgn0037351RpL13A9757.789ENSPPAG00000037365RPL13A9857.789Pan_paniscus
FBgn0037351RpL13A9753.769ENSPPAG00000019107-9853.769Pan_paniscus
FBgn0037351RpL13A9757.286ENSPPRG00000011265RPL13A9857.286Panthera_pardus
FBgn0037351RpL13A9754.271ENSPTRG00000049426-9854.271Pan_troglodytes
FBgn0037351RpL13A6468.702ENSPTRG00000052284-9068.702Pan_troglodytes
FBgn0037351RpL13A9757.789ENSPTRG00000011298RPL13A9857.789Pan_troglodytes
FBgn0037351RpL13A9657.653ENSPTRG00000050666-9757.653Pan_troglodytes
FBgn0037351RpL13A6853.957ENSPTRG00000042978-9853.957Pan_troglodytes
FBgn0037351RpL13A9858.000ENSPANG00000012050RPL13A9958.000Papio_anubis
FBgn0037351RpL13A9956.436ENSPKIG00000000720rpl13a9956.436Paramormyrops_kingsleyae
FBgn0037351RpL13A9659.184ENSPSIG00000018234RPL13A9859.184Pelodiscus_sinensis
FBgn0037351RpL13A9657.653ENSPMGG00000010552rpl13a9457.653Periophthalmus_magnuspinnatus
FBgn0037351RpL13A9757.789ENSPEMG00000009221-8670.435Peromyscus_maniculatus_bairdii
FBgn0037351RpL13A9957.921ENSPMAG00000006362rpl13a9957.921Petromyzon_marinus
FBgn0037351RpL13A8245.562ENSPCIG00000014063-9045.562Phascolarctos_cinereus
FBgn0037351RpL13A9859.000ENSPCIG00000007340-9959.000Phascolarctos_cinereus
FBgn0037351RpL13A9956.931ENSPFOG00000013546rpl13a9956.931Poecilia_formosa
FBgn0037351RpL13A10057.073ENSPLAG00000016066rpl13a9957.426Poecilia_latipinna
FBgn0037351RpL13A9956.931ENSPMEG00000018384rpl13a9956.931Poecilia_mexicana
FBgn0037351RpL13A9956.931ENSPREG00000020079rpl13a9956.931Poecilia_reticulata
FBgn0037351RpL13A9757.789ENSPPYG00000006798-9857.789Pongo_abelii
FBgn0037351RpL13A9757.789ENSPPYG00000010251-9857.789Pongo_abelii
FBgn0037351RpL13A9858.000ENSPCAG00000004086RPL13A9958.000Procavia_capensis
FBgn0037351RpL13A9448.705ENSPCOG00000016293-9348.705Propithecus_coquereli
FBgn0037351RpL13A9857.500ENSPCOG00000023898RPL13A9957.789Propithecus_coquereli
FBgn0037351RpL13A9857.500ENSPVAG00000010958RPL13A9957.500Pteropus_vampyrus
FBgn0037351RpL13A9956.931ENSPNYG00000019779rpl13a9956.931Pundamilia_nyererei
FBgn0037351RpL13A9956.931ENSPNAG00000026887rpl13a9956.931Pygocentrus_nattereri
FBgn0037351RpL13A9757.789ENSRNOG00000062298Rpl13a9857.789Rattus_norvegicus
FBgn0037351RpL13A9757.789ENSRBIG00000044737RPL13A9857.789Rhinopithecus_bieti
FBgn0037351RpL13A9757.789ENSRROG00000042976-9857.789Rhinopithecus_roxellana
FBgn0037351RpL13A6461.364ENSRROG00000028369-6661.364Rhinopithecus_roxellana
FBgn0037351RpL13A9753.769ENSRROG00000036041-9853.769Rhinopithecus_roxellana
FBgn0037351RpL13A7959.877YNL069CRPL16B10052.736Saccharomyces_cerevisiae
FBgn0037351RpL13A9557.436YIL133CRPL16A9757.436Saccharomyces_cerevisiae
FBgn0037351RpL13A9757.576ENSSBOG00000028481RPL13A9957.576Saimiri_boliviensis_boliviensis
FBgn0037351RpL13A9747.222ENSSBOG00000024635-9847.222Saimiri_boliviensis_boliviensis
FBgn0037351RpL13A10058.049ENSSFOG00015001972rpl13a10058.049Scleropages_formosus
FBgn0037351RpL13A9956.931ENSSDUG00000017181rpl13a9857.949Seriola_dumerili
FBgn0037351RpL13A9956.931ENSSLDG00000002561rpl13a9956.931Seriola_lalandi_dorsalis
FBgn0037351RpL13A7958.642ENSSLDG00000007920-9952.525Seriola_lalandi_dorsalis
FBgn0037351RpL13A9858.000ENSSSCG00000034448-9858.000Sus_scrofa
FBgn0037351RpL13A9445.833ENSSSCG00000031204-9548.588Sus_scrofa
FBgn0037351RpL13A9957.426ENSTRUG00000023611rpl13a9957.426Takifugu_rubripes
FBgn0037351RpL13A9858.500ENSTTRG00000005485RPL13A9958.500Tursiops_truncatus
FBgn0037351RpL13A9857.500ENSUAMG00000008438RPL13A9957.500Ursus_americanus
FBgn0037351RpL13A9857.500ENSUMAG00000002385RPL13A9957.500Ursus_maritimus
FBgn0037351RpL13A9756.566ENSVPAG00000006564RPL13A10056.566Vicugna_pacos
FBgn0037351RpL13A9857.500ENSVVUG00000022597RPL13A9957.500Vulpes_vulpes
FBgn0037351RpL13A9757.789ENSXETG00000014144rpl13a8657.789Xenopus_tropicalis
FBgn0037351RpL13A9956.931ENSXCOG00000004826rpl13a9956.931Xiphophorus_couchianus
FBgn0037351RpL13A9956.931ENSXMAG00000027604rpl13a9956.931Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0002181cytoplasmic translation16889426.ICProcess
GO:0002181cytoplasmic translation17927810.TASProcess
GO:0003729mRNA binding21873635.IBAFunction
GO:0003735structural constituent of ribosome16889426.HDAFunction
GO:0003735structural constituent of ribosome21873635.IBAFunction
GO:0003735structural constituent of ribosome17927810.TASFunction
GO:0005840ribosome21873635.IBAComponent
GO:0017148negative regulation of translation21873635.IBAProcess
GO:0022625cytosolic large ribosomal subunit21873635.IBAComponent
GO:0022625cytosolic large ribosomal subunit17927810.TASComponent
GO:0022626cytosolic ribosome16889426.HDAComponent

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