EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0037364 (Gene tree)
Gene ID: 40701
Gene Symbol: Rab23
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 5381 bases
Position: chr3R:5680054-5685434
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0078376	MMR_HSR1	PF01926.23	2.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0078727	-	2267	-	FBpp0078376	268 (aa)	-	Q9VNG6

Gene Model

Click here to download FBgn0037364's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0037364's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0037364	Rab23	62	36.747	FBgn0031882	Rab30	74	36.747
FBgn0037364	Rab23	59	38.125	FBgn0285937	Rab1	80	34.637
FBgn0037364	Rab23	70	33.679	FBgn0014010	Rab5	77	32.768
FBgn0037364	Rab23	64	37.931	FBgn0039966	Rab21	76	37.162
FBgn0037364	Rab23	53	30.769	FBgn0003205	Ras85D	75	30.769
FBgn0037364	Rab23	66	30.939	FBgn0041191	Rheb	88	30.994
FBgn0037364	Rab23	63	34.091	FBgn0029959	Rab39	71	34.839
FBgn0037364	Rab23	67	36.264	FBgn0031090	Rab35	80	36.250
FBgn0037364	Rab23	68	31.959	FBgn0015795	Rab7	88	30.769
FBgn0037364	Rab23	60	36.420	FBgn0015794	Rab18	81	36.420
FBgn0037364	Rab23	59	37.342	FBgn0015797	Rab6	70	36.986
FBgn0037364	Rab23	74	33.990	FBgn0015790	Rab11	95	33.990
FBgn0037364	Rab23	65	31.844	FBgn0035255	RabX5	54	32.215

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0037364	Rab23	82	59.389	ENSG00000112210	RAB23	94	59.389	Homo_sapiens
FBgn0037364	Rab23	82	60.793	ENSAPOG00000008892	rab23	94	60.793	Acanthochromis_polyacanthus
FBgn0037364	Rab23	82	60.000	ENSAMEG00000006825	RAB23	94	60.000	Ailuropoda_melanoleuca
FBgn0037364	Rab23	64	70.930	ENSACIG00000020496	rab23	85	70.930	Amphilophus_citrinellus
FBgn0037364	Rab23	90	57.490	ENSAOCG00000004234	rab23	97	62.437	Amphiprion_ocellaris
FBgn0037364	Rab23	90	57.490	ENSAPEG00000019758	rab23	97	62.437	Amphiprion_percula
FBgn0037364	Rab23	82	60.793	ENSATEG00000020913	rab23	85	69.942	Anabas_testudineus
FBgn0037364	Rab23	65	70.857	ENSAPLG00000003715	RAB23	99	70.857	Anas_platyrhynchos
FBgn0037364	Rab23	65	69.714	ENSACAG00000006656	RAB23	74	69.714	Anolis_carolinensis
FBgn0037364	Rab23	82	59.565	ENSANAG00000027052	-	94	59.565	Aotus_nancymaae
FBgn0037364	Rab23	82	61.674	ENSACLG00000002819	rab23	94	61.674	Astatotilapia_calliptera
FBgn0037364	Rab23	90	57.959	ENSAMXG00000014960	rab23	100	55.952	Astyanax_mexicanus
FBgn0037364	Rab23	82	58.952	ENSBTAG00000005362	RAB23	94	58.952	Bos_taurus
FBgn0037364	Rab23	82	59.565	ENSCJAG00000010247	RAB23	94	59.565	Callithrix_jacchus
FBgn0037364	Rab23	82	59.556	ENSCAFG00000002459	RAB23	94	59.556	Canis_familiaris
FBgn0037364	Rab23	82	59.556	ENSCAFG00020015900	RAB23	94	59.556	Canis_lupus_dingo
FBgn0037364	Rab23	82	58.952	ENSCHIG00000009815	RAB23	94	58.952	Capra_hircus
FBgn0037364	Rab23	90	56.800	ENSTSYG00000029126	RAB23	100	56.800	Carlito_syrichta
FBgn0037364	Rab23	82	60.181	ENSCPOG00000030218	RAB23	94	60.181	Cavia_porcellus
FBgn0037364	Rab23	82	59.130	ENSCCAG00000020364	RAB23	94	59.130	Cebus_capucinus
FBgn0037364	Rab23	82	59.565	ENSCATG00000027876	RAB23	94	59.565	Cercocebus_atys
FBgn0037364	Rab23	89	57.258	ENSCLAG00000000797	RAB23	94	60.699	Chinchilla_lanigera
FBgn0037364	Rab23	82	59.565	ENSCSAG00000013438	RAB23	94	59.565	Chlorocebus_sabaeus
FBgn0037364	Rab23	65	69.714	ENSCPBG00000022640	RAB23	94	58.621	Chrysemys_picta_bellii
FBgn0037364	Rab23	90	54.902	ENSCING00000001155	-	100	54.510	Ciona_intestinalis
FBgn0037364	Rab23	88	55.242	ENSCSAVG00000001356	-	99	56.048	Ciona_savignyi
FBgn0037364	Rab23	82	59.565	ENSCANG00000031065	RAB23	94	59.565	Colobus_angolensis_palliatus
FBgn0037364	Rab23	82	59.459	ENSCGRG00001008994	Rab23	94	59.459	Cricetulus_griseus_chok1gshd
FBgn0037364	Rab23	81	58.636	ENSCGRG00000013630	Rab23	93	58.636	Cricetulus_griseus_crigri
FBgn0037364	Rab23	64	69.942	ENSCSEG00000010565	rab23	85	69.942	Cynoglossus_semilaevis
FBgn0037364	Rab23	82	59.821	ENSCVAG00000020501	rab23	97	62.437	Cyprinodon_variegatus
FBgn0037364	Rab23	65	73.143	ENSDARG00000004151	rab23	74	73.143	Danio_rerio
FBgn0037364	Rab23	65	70.286	ENSDNOG00000015501	RAB23	94	59.821	Dasypus_novemcinctus
FBgn0037364	Rab23	82	58.824	ENSDORG00000028344	Rab23	94	58.824	Dipodomys_ordii
FBgn0037364	Rab23	88	56.017	ENSEBUG00000010861	-	93	56.017	Eptatretus_burgeri
FBgn0037364	Rab23	82	58.952	ENSEASG00005003529	RAB23	94	58.952	Equus_asinus_asinus
FBgn0037364	Rab23	82	58.952	ENSECAG00000013427	RAB23	94	58.952	Equus_caballus
FBgn0037364	Rab23	90	56.175	ENSEEUG00000015045	RAB23	100	56.175	Erinaceus_europaeus
FBgn0037364	Rab23	75	63.235	ENSELUG00000020788	rab23	94	60.262	Esox_lucius
FBgn0037364	Rab23	82	60.000	ENSFCAG00000044358	RAB23	94	60.000	Felis_catus
FBgn0037364	Rab23	75	65.347	ENSFALG00000001708	RAB23	82	65.347	Ficedula_albicollis
FBgn0037364	Rab23	89	56.846	ENSFDAG00000014834	RAB23	99	56.846	Fukomys_damarensis
FBgn0037364	Rab23	65	71.429	ENSFHEG00000023069	rab23	94	59.912	Fundulus_heteroclitus
FBgn0037364	Rab23	82	58.952	ENSGMOG00000005102	rab23	94	58.952	Gadus_morhua
FBgn0037364	Rab23	89	54.400	ENSGALG00000016279	RAB23	94	57.576	Gallus_gallus
FBgn0037364	Rab23	82	61.233	ENSGAFG00000007684	rab23	94	61.233	Gambusia_affinis
FBgn0037364	Rab23	90	57.085	ENSGACG00000006151	rab23	94	60.352	Gasterosteus_aculeatus
FBgn0037364	Rab23	65	70.286	ENSGAGG00000012709	RAB23	94	59.052	Gopherus_agassizii
FBgn0037364	Rab23	64	71.098	ENSHBUG00000007966	rab23	85	71.098	Haplochromis_burtoni
FBgn0037364	Rab23	82	59.459	ENSHGLG00000013030	-	94	60.173	Heterocephalus_glaber_female
FBgn0037364	Rab23	61	57.317	ENSHGLG00000009371	-	70	55.491	Heterocephalus_glaber_female
FBgn0037364	Rab23	61	57.317	ENSHGLG00100017177	-	70	55.491	Heterocephalus_glaber_male
FBgn0037364	Rab23	82	59.459	ENSHGLG00100005945	-	94	60.173	Heterocephalus_glaber_male
FBgn0037364	Rab23	59	73.418	ENSHCOG00000013919	rab23	77	73.418	Hippocampus_comes
FBgn0037364	Rab23	59	73.418	ENSIPUG00000016494	rab23	77	73.418	Ictalurus_punctatus
FBgn0037364	Rab23	82	59.483	ENSSTOG00000010962	RAB23	94	59.483	Ictidomys_tridecemlineatus
FBgn0037364	Rab23	82	58.515	ENSJJAG00000020094	Rab23	94	58.515	Jaculus_jaculus
FBgn0037364	Rab23	82	59.821	ENSKMAG00000018270	rab23	94	59.821	Kryptolebias_marmoratus
FBgn0037364	Rab23	82	60.352	ENSLBEG00000013176	rab23	100	61.275	Labrus_bergylta
FBgn0037364	Rab23	90	57.200	ENSLACG00000004025	RAB23	100	57.200	Latimeria_chalumnae
FBgn0037364	Rab23	87	58.369	ENSLOCG00000016999	rab23	91	58.369	Lepisosteus_oculatus
FBgn0037364	Rab23	65	70.286	ENSLAFG00000007209	RAB23	94	59.009	Loxodonta_africana
FBgn0037364	Rab23	82	59.565	ENSMFAG00000032369	RAB23	94	59.565	Macaca_fascicularis
FBgn0037364	Rab23	82	59.565	ENSMMUG00000018003	RAB23	94	59.565	Macaca_mulatta
FBgn0037364	Rab23	82	59.565	ENSMNEG00000037012	RAB23	94	59.565	Macaca_nemestrina
FBgn0037364	Rab23	82	59.565	ENSMLEG00000042429	RAB23	94	59.565	Mandrillus_leucophaeus
FBgn0037364	Rab23	82	60.909	ENSMAMG00000015456	rab23	85	70.520	Mastacembelus_armatus
FBgn0037364	Rab23	82	61.674	ENSMZEG00005005441	rab23	85	71.098	Maylandia_zebra
FBgn0037364	Rab23	89	55.200	ENSMGAG00000013882	RAB23	94	58.442	Meleagris_gallopavo
FBgn0037364	Rab23	82	60.000	ENSMICG00000014037	RAB23	94	60.000	Microcebus_murinus
FBgn0037364	Rab23	82	59.459	ENSMOCG00000000444	Rab23	94	59.459	Microtus_ochrogaster
FBgn0037364	Rab23	64	69.540	ENSMMOG00000007703	rab23	85	69.540	Mola_mola
FBgn0037364	Rab23	57	69.481	ENSMODG00000018720	RAB23	94	59.130	Monodelphis_domestica
FBgn0037364	Rab23	90	57.490	ENSMALG00000002136	rab23	100	57.490	Monopterus_albus
FBgn0037364	Rab23	82	59.009	MGP_CAROLIEiJ_G0014015	Rab23	94	59.009	Mus_caroli
FBgn0037364	Rab23	82	59.009	ENSMUSG00000004768	Rab23	94	59.009	Mus_musculus
FBgn0037364	Rab23	82	58.108	MGP_PahariEiJ_G0027261	Rab23	94	58.108	Mus_pahari
FBgn0037364	Rab23	82	59.009	MGP_SPRETEiJ_G0014820	Rab23	94	59.009	Mus_spretus
FBgn0037364	Rab23	62	70.482	ENSMPUG00000002642	RAB23	70	70.482	Mustela_putorius_furo
FBgn0037364	Rab23	82	60.435	ENSMLUG00000004058	RAB23	94	60.435	Myotis_lucifugus
FBgn0037364	Rab23	82	59.389	ENSNGAG00000018038	Rab23	94	59.389	Nannospalax_galili
FBgn0037364	Rab23	82	61.674	ENSNBRG00000013691	rab23	85	71.098	Neolamprologus_brichardi
FBgn0037364	Rab23	82	59.565	ENSNLEG00000027830	RAB23	94	59.565	Nomascus_leucogenys
FBgn0037364	Rab23	75	64.356	ENSODEG00000016056	RAB23	82	64.356	Octodon_degus
FBgn0037364	Rab23	82	61.062	ENSONIG00000009749	rab23	94	61.062	Oreochromis_niloticus
FBgn0037364	Rab23	82	58.190	ENSOANG00000001398	RAB23	94	58.190	Ornithorhynchus_anatinus
FBgn0037364	Rab23	82	59.009	ENSOCUG00000004816	RAB23	94	59.009	Oryctolagus_cuniculus
FBgn0037364	Rab23	82	61.233	ENSORLG00000010115	rab23	85	70.520	Oryzias_latipes
FBgn0037364	Rab23	82	61.233	ENSORLG00020020220	rab23	85	70.520	Oryzias_latipes_hni
FBgn0037364	Rab23	90	57.895	ENSORLG00015004033	rab23	100	57.895	Oryzias_latipes_hsok
FBgn0037364	Rab23	82	59.912	ENSOMEG00000001706	rab23	85	69.942	Oryzias_melastigma
FBgn0037364	Rab23	82	58.515	ENSOGAG00000005675	RAB23	94	58.515	Otolemur_garnettii
FBgn0037364	Rab23	82	58.952	ENSOARG00000005749	RAB23	94	58.952	Ovis_aries
FBgn0037364	Rab23	82	60.000	ENSPPAG00000010023	RAB23	94	60.000	Pan_paniscus
FBgn0037364	Rab23	82	59.565	ENSPPRG00000012453	RAB23	94	59.565	Panthera_pardus
FBgn0037364	Rab23	82	60.000	ENSPTIG00000009435	RAB23	94	60.000	Panthera_tigris_altaica
FBgn0037364	Rab23	82	59.565	ENSPTRG00000043341	RAB23	94	59.565	Pan_troglodytes
FBgn0037364	Rab23	82	59.565	ENSPANG00000017772	RAB23	94	59.565	Papio_anubis
FBgn0037364	Rab23	65	71.429	ENSPKIG00000024310	rab23	86	71.429	Paramormyrops_kingsleyae
FBgn0037364	Rab23	82	58.621	ENSPSIG00000015579	RAB23	94	58.621	Pelodiscus_sinensis
FBgn0037364	Rab23	64	72.093	ENSPMGG00000008577	rab23	85	72.093	Periophthalmus_magnuspinnatus
FBgn0037364	Rab23	82	60.811	ENSPEMG00000023271	Rab23	94	60.811	Peromyscus_maniculatus_bairdii
FBgn0037364	Rab23	90	55.187	ENSPMAG00000006835	-	100	55.187	Petromyzon_marinus
FBgn0037364	Rab23	57	69.481	ENSPCIG00000007267	RAB23	74	69.714	Phascolarctos_cinereus
FBgn0037364	Rab23	82	61.233	ENSPFOG00000011493	rab23	94	61.233	Poecilia_formosa
FBgn0037364	Rab23	82	60.793	ENSPLAG00000011697	rab23	94	60.793	Poecilia_latipinna
FBgn0037364	Rab23	82	61.233	ENSPMEG00000017300	rab23	94	61.233	Poecilia_mexicana
FBgn0037364	Rab23	59	73.418	ENSPREG00000022509	rab23	77	73.418	Poecilia_reticulata
FBgn0037364	Rab23	82	59.565	ENSPPYG00000016739	RAB23	94	59.565	Pongo_abelii
FBgn0037364	Rab23	82	59.009	ENSPCOG00000028471	RAB23	94	59.009	Propithecus_coquereli
FBgn0037364	Rab23	59	72.785	ENSPVAG00000017693	RAB23	67	72.785	Pteropus_vampyrus
FBgn0037364	Rab23	82	61.674	ENSPNYG00000019639	rab23	85	71.098	Pundamilia_nyererei
FBgn0037364	Rab23	90	57.959	ENSPNAG00000024728	rab23	100	57.959	Pygocentrus_nattereri
FBgn0037364	Rab23	82	59.825	ENSRNOG00000012629	Rab23	94	59.389	Rattus_norvegicus
FBgn0037364	Rab23	82	57.143	ENSRBIG00000030547	RAB23	94	57.143	Rhinopithecus_bieti
FBgn0037364	Rab23	65	69.714	ENSRROG00000035920	RAB23	74	69.714	Rhinopithecus_roxellana
FBgn0037364	Rab23	82	58.515	ENSSBOG00000033237	RAB23	94	58.515	Saimiri_boliviensis_boliviensis
FBgn0037364	Rab23	74	56.872	ENSSHAG00000006379	RAB23	94	58.190	Sarcophilus_harrisii
FBgn0037364	Rab23	90	56.175	ENSSFOG00015012604	rab23	91	64.737	Scleropages_formosus
FBgn0037364	Rab23	82	60.793	ENSSMAG00000006341	rab23	100	61.275	Scophthalmus_maximus
FBgn0037364	Rab23	90	57.085	ENSSDUG00000023508	rab23	85	69.364	Seriola_dumerili
FBgn0037364	Rab23	90	57.085	ENSSLDG00000000287	rab23	85	69.364	Seriola_lalandi_dorsalis
FBgn0037364	Rab23	82	59.389	ENSSARG00000013689	RAB23	94	59.389	Sorex_araneus
FBgn0037364	Rab23	82	58.009	ENSSPUG00000006274	RAB23	94	58.009	Sphenodon_punctatus
FBgn0037364	Rab23	90	57.490	ENSSPAG00000010373	rab23	97	62.437	Stegastes_partitus
FBgn0037364	Rab23	86	58.696	ENSSSCG00000029539	RAB23	92	58.696	Sus_scrofa
FBgn0037364	Rab23	65	71.429	ENSTGUG00000012794	RAB23	74	71.429	Taeniopygia_guttata
FBgn0037364	Rab23	82	59.471	ENSTRUG00000015697	rab23	85	69.942	Takifugu_rubripes
FBgn0037364	Rab23	82	61.674	ENSTNIG00000016575	rab23	94	61.674	Tetraodon_nigroviridis
FBgn0037364	Rab23	82	60.435	ENSUAMG00000013367	RAB23	94	60.435	Ursus_americanus
FBgn0037364	Rab23	82	60.435	ENSUMAG00000018629	RAB23	94	60.435	Ursus_maritimus
FBgn0037364	Rab23	65	51.429	ENSVPAG00000006805	RAB23	92	51.429	Vicugna_pacos
FBgn0037364	Rab23	82	59.556	ENSVVUG00000008535	RAB23	94	59.556	Vulpes_vulpes
FBgn0037364	Rab23	65	65.318	ENSXETG00000004449	rab23	94	55.157	Xenopus_tropicalis
FBgn0037364	Rab23	82	60.793	ENSXCOG00000011864	rab23	94	60.793	Xiphophorus_couchianus
FBgn0037364	Rab23	82	61.233	ENSXMAG00000009387	rab23	94	61.233	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000045	autophagosome assembly	21873635.	IBA	Process
GO:0001738	morphogenesis of a polarized epithelium	20124028.	IMP	Process
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0003924	GTPase activity	-	ISS	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005737	cytoplasm	20124028.	IDA	Component
GO:0005776	autophagosome	21873635.	IBA	Component
GO:0005886	plasma membrane	20124028.	IDA	Component
GO:0006886	intracellular protein transport	21873635.	IBA	Process
GO:0007224	smoothened signaling pathway	20124028.	IMP	Process
GO:0010008	endosome membrane	21873635.	IBA	Component
GO:0016192	vesicle-mediated transport	-	ISS	Process
GO:0031982	vesicle	-	ISS	Component
GO:0032482	Rab protein signal transduction	21873635.	IBA	Process
GO:0032482	Rab protein signal transduction	-	ISS	Process
GO:0043025	neuronal cell body	22844416.	IDA	Component
GO:0045202	synapse	22000105.	HDA	Component
GO:0045202	synapse	22844416.	IDA	Component
GO:0050714	positive regulation of protein secretion	26801178.	IMP	Process
GO:0055037	recycling endosome	22000105.	HDA	Component