EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0037368 (Gene tree)
Gene ID: 40706
Gene Symbol: CG1239
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 1190 bases
Position: chr3R:5733513-5734702
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0078369	Bin3	PF06859.12	2.5e-39	1	1
FBpp0310437	Bin3	PF06859.12	2.5e-39	1	1
FBpp0310438	Bin3	PF06859.12	2.5e-39	1	1
FBpp0078369	Methyltransf_31	PF13847.6	9.9e-12	1	1
FBpp0310437	Methyltransf_31	PF13847.6	9.9e-12	1	1
FBpp0310438	Methyltransf_31	PF13847.6	9.9e-12	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0343988	-	1058	-	FBpp0310437	300 (aa)	-	Q9VNH1
FBtr0343989	-	1052	-	FBpp0310438	300 (aa)	-	Q9VNH1
FBtr0078720	-	1051	-	FBpp0078369	300 (aa)	-	Q9VNH1

Gene Model

Click here to download FBgn0037368's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0037368's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0037368	CG1239	75	39.855	ENSG00000146834	MEPCE	60	50.376	Homo_sapiens
FBgn0037368	CG1239	63	44.304	ENSAPOG00000010701	-	56	42.697	Acanthochromis_polyacanthus
FBgn0037368	CG1239	97	34.540	ENSAMEG00000015035	MEPCE	56	35.097	Ailuropoda_melanoleuca
FBgn0037368	CG1239	62	30.392	ENSACIG00000014124	bcdin3d	76	30.392	Amphilophus_citrinellus
FBgn0037368	CG1239	64	30.734	ENSAOCG00000021202	bcdin3d	74	30.734	Amphiprion_ocellaris
FBgn0037368	CG1239	64	31.193	ENSAPEG00000011187	bcdin3d	74	31.193	Amphiprion_percula
FBgn0037368	CG1239	50	30.769	ENSATEG00000025077	bcdin3d	58	30.769	Anabas_testudineus
FBgn0037368	CG1239	52	30.588	ENSACLG00000021365	bcdin3d	62	30.588	Astatotilapia_calliptera
FBgn0037368	CG1239	90	39.333	WBGene00012469	Y17G7B.18	78	39.333	Caenorhabditis_elegans
FBgn0037368	CG1239	66	39.669	ENSCPBG00000016397	MEPCE	98	39.669	Chrysemys_picta_bellii
FBgn0037368	CG1239	75	39.855	ENSCANG00000030898	MEPCE	60	50.376	Colobus_angolensis_palliatus
FBgn0037368	CG1239	64	30.000	ENSCVAG00000018391	bcdin3d	80	30.000	Cyprinodon_variegatus
FBgn0037368	CG1239	75	39.855	ENSDORG00000005311	Mepce	97	58.065	Dipodomys_ordii
FBgn0037368	CG1239	75	40.217	ENSETEG00000001440	-	54	37.346	Echinops_telfairi
FBgn0037368	CG1239	85	38.413	ENSEASG00005017074	MEPCE	51	36.364	Equus_asinus_asinus
FBgn0037368	CG1239	85	38.413	ENSECAG00000024124	MEPCE	51	36.364	Equus_caballus
FBgn0037368	CG1239	85	37.700	ENSFDAG00000001651	MEPCE	61	35.429	Fukomys_damarensis
FBgn0037368	CG1239	64	30.455	ENSFHEG00000012627	bcdin3d	81	30.455	Fundulus_heteroclitus
FBgn0037368	CG1239	66	52.899	ENSGMOG00000003093	mepce	58	52.899	Gadus_morhua
FBgn0037368	CG1239	57	30.332	ENSGMOG00000000837	-	65	30.332	Gadus_morhua
FBgn0037368	CG1239	64	30.093	ENSGAFG00000001353	bcdin3d	71	30.093	Gambusia_affinis
FBgn0037368	CG1239	88	45.902	ENSGACG00000020701	mepce	84	45.679	Gasterosteus_aculeatus
FBgn0037368	CG1239	80	30.897	ENSGACG00000001158	-	87	30.667	Gasterosteus_aculeatus
FBgn0037368	CG1239	75	39.855	ENSGGOG00000005371	MEPCE	60	50.376	Gorilla_gorilla
FBgn0037368	CG1239	77	39.286	ENSHGLG00100016274	MEPCE	53	36.957	Heterocephalus_glaber_male
FBgn0037368	CG1239	64	31.222	ENSHCOG00000001123	bcdin3d	79	31.222	Hippocampus_comes
FBgn0037368	CG1239	69	41.593	ENSHCOG00000009246	-	50	30.588	Hippocampus_comes
FBgn0037368	CG1239	67	54.348	ENSIPUG00000021852	mepce	94	38.813	Ictalurus_punctatus
FBgn0037368	CG1239	75	39.493	ENSJJAG00000010924	Mepce	50	36.111	Jaculus_jaculus
FBgn0037368	CG1239	52	31.250	ENSKMAG00000014656	bcdin3d	66	31.250	Kryptolebias_marmoratus
FBgn0037368	CG1239	75	43.846	ENSLACG00000012355	MEPCE	74	39.818	Latimeria_chalumnae
FBgn0037368	CG1239	65	52.632	ENSLOCG00000013586	mepce	68	48.780	Lepisosteus_oculatus
FBgn0037368	CG1239	75	39.855	ENSMLEG00000043318	MEPCE	60	50.376	Mandrillus_leucophaeus
FBgn0037368	CG1239	79	44.262	ENSMAMG00000017139	mepce	81	43.455	Mastacembelus_armatus
FBgn0037368	CG1239	52	30.588	ENSMZEG00005004155	bcdin3d	62	30.588	Maylandia_zebra
FBgn0037368	CG1239	75	40.433	ENSMAUG00000001456	Mepce	53	35.876	Mesocricetus_auratus
FBgn0037368	CG1239	75	40.217	ENSMICG00000030166	MEPCE	51	35.328	Microcebus_murinus
FBgn0037368	CG1239	53	32.044	ENSMMOG00000004063	bcdin3d	65	32.044	Mola_mola
FBgn0037368	CG1239	55	43.011	ENSMALG00000015674	-	97	43.011	Monopterus_albus
FBgn0037368	CG1239	79	38.542	MGP_CAROLIEiJ_G0027892	Mepce	97	58.065	Mus_caroli
FBgn0037368	CG1239	78	38.869	ENSMUSG00000029726	Mepce	97	58.065	Mus_musculus
FBgn0037368	CG1239	78	38.869	MGP_SPRETEiJ_G0028897	Mepce	97	58.065	Mus_spretus
FBgn0037368	CG1239	85	37.898	ENSNGAG00000007098	Mepce	53	35.897	Nannospalax_galili
FBgn0037368	CG1239	64	30.516	ENSNBRG00000007102	bcdin3d	81	30.516	Neolamprologus_brichardi
FBgn0037368	CG1239	75	39.130	ENSOPRG00000014811	MEPCE	52	35.043	Ochotona_princeps
FBgn0037368	CG1239	64	30.986	ENSONIG00000006870	bcdin3d	76	30.986	Oreochromis_niloticus
FBgn0037368	CG1239	68	41.270	ENSONIG00000005231	mepce	53	41.544	Oreochromis_niloticus
FBgn0037368	CG1239	52	30.682	ENSORLG00020013764	bcdin3d	65	30.682	Oryzias_latipes_hni
FBgn0037368	CG1239	52	32.386	ENSOMEG00000013355	bcdin3d	60	32.386	Oryzias_melastigma
FBgn0037368	CG1239	75	40.217	ENSOGAG00000034770	MEPCE	51	34.857	Otolemur_garnettii
FBgn0037368	CG1239	75	40.942	ENSPPRG00000002350	MEPCE	60	52.632	Panthera_pardus
FBgn0037368	CG1239	75	39.855	ENSPEMG00000003157	Mepce	52	35.043	Peromyscus_maniculatus_bairdii
FBgn0037368	CG1239	86	36.164	ENSPCIG00000012285	MEPCE	61	51.969	Phascolarctos_cinereus
FBgn0037368	CG1239	68	42.194	ENSPMEG00000013697	mepce	56	38.390	Poecilia_mexicana
FBgn0037368	CG1239	78	39.223	ENSRNOG00000001387	LOC100910540	53	35.328	Rattus_norvegicus
FBgn0037368	CG1239	78	39.223	ENSRNOG00000045911	Mepce	53	35.328	Rattus_norvegicus
FBgn0037368	CG1239	75	40.217	ENSSBOG00000011382	MEPCE	60	51.128	Saimiri_boliviensis_boliviensis
FBgn0037368	CG1239	52	32.370	ENSSMAG00000010097	bcdin3d	65	32.370	Scophthalmus_maximus
FBgn0037368	CG1239	64	30.275	ENSSDUG00000017056	bcdin3d	81	30.275	Seriola_dumerili
FBgn0037368	CG1239	73	31.365	ENSSLDG00000019673	-	72	30.519	Seriola_lalandi_dorsalis
FBgn0037368	CG1239	69	42.623	ENSSLDG00000020120	mepce	61	41.489	Seriola_lalandi_dorsalis
FBgn0037368	CG1239	52	30.556	ENSSPAG00000021374	bcdin3d	67	30.556	Stegastes_partitus
FBgn0037368	CG1239	50	32.143	ENSTRUG00000018395	bcdin3d	62	32.143	Takifugu_rubripes
FBgn0037368	CG1239	65	38.235	ENSTNIG00000010046	mepce	54	36.299	Tetraodon_nigroviridis
FBgn0037368	CG1239	85	37.460	ENSTTRG00000008873	MEPCE	50	35.511	Tursiops_truncatus
FBgn0037368	CG1239	78	39.223	ENSUMAG00000010719	MEPCE	57	36.336	Ursus_maritimus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0008171	O-methyltransferase activity	21873635.	IBA	Function
GO:0008173	RNA methyltransferase activity	21873635.	IBA	Function
GO:0017069	snRNA binding	21873635.	IBA	Function
GO:0040031	snRNA modification	21873635.	IBA	Process