EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0037371 (Gene tree)
Gene ID: 40709
Gene Symbol: Sym
Alias: -
Full Name: Symplekin
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 4299 bases
Position: chr3R:5738178-5742476
Accession: FBgn0037371
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0078372	Symplekin_C	PF12295.8	1.8e-61	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0078723	-	3986	-	FBpp0078372	1165 (aa)	-	Q8MSU4

Gene Model

Click here to download FBgn0037371's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0037371's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0037371	Sym	95	36.729	ENSG00000125755	SYMPK	96	34.058	Homo_sapiens
FBgn0037371	Sym	90	37.757	ENSAPOG00000015934	sympk	96	37.681	Acanthochromis_polyacanthus
FBgn0037371	Sym	95	37.044	ENSAMEG00000000680	SYMPK	86	37.044	Ailuropoda_melanoleuca
FBgn0037371	Sym	90	37.082	ENSACIG00000006357	sympk	91	36.114	Amphilophus_citrinellus
FBgn0037371	Sym	90	37.664	ENSAOCG00000024124	sympk	89	37.570	Amphiprion_ocellaris
FBgn0037371	Sym	90	37.374	ENSAPEG00000003465	sympk	86	37.374	Amphiprion_percula
FBgn0037371	Sym	91	37.268	ENSATEG00000008472	sympk	87	37.244	Anabas_testudineus
FBgn0037371	Sym	83	36.954	ENSACAG00000004126	SYMPK	81	36.954	Anolis_carolinensis
FBgn0037371	Sym	95	36.640	ENSANAG00000021087	SYMPK	98	37.034	Aotus_nancymaae
FBgn0037371	Sym	91	37.546	ENSACLG00000001813	sympk	86	37.546	Astatotilapia_calliptera
FBgn0037371	Sym	93	36.495	ENSAMXG00000013677	sympk	88	36.405	Astyanax_mexicanus
FBgn0037371	Sym	95	36.598	ENSBTAG00000012101	SYMPK	86	36.776	Bos_taurus
FBgn0037371	Sym	95	36.640	ENSCJAG00000012172	SYMPK	98	36.754	Callithrix_jacchus
FBgn0037371	Sym	95	36.955	ENSCAFG00000004376	SYMPK	86	36.955	Canis_familiaris
FBgn0037371	Sym	95	36.955	ENSCAFG00020001815	SYMPK	86	36.955	Canis_lupus_dingo
FBgn0037371	Sym	95	36.687	ENSCHIG00000026784	SYMPK	86	36.866	Capra_hircus
FBgn0037371	Sym	95	36.492	ENSTSYG00000006268	SYMPK	94	34.853	Carlito_syrichta
FBgn0037371	Sym	90	36.778	ENSCAPG00000005112	SYMPK	94	36.778	Cavia_aperea
FBgn0037371	Sym	94	36.908	ENSCPOG00000010434	SYMPK	87	36.908	Cavia_porcellus
FBgn0037371	Sym	95	36.640	ENSCCAG00000036309	SYMPK	99	36.969	Cebus_capucinus
FBgn0037371	Sym	97	36.245	ENSCATG00000045107	SYMPK	99	36.731	Cercocebus_atys
FBgn0037371	Sym	95	36.879	ENSCLAG00000001206	SYMPK	86	36.879	Chinchilla_lanigera
FBgn0037371	Sym	95	36.729	ENSCSAG00000003115	SYMPK	86	36.729	Chlorocebus_sabaeus
FBgn0037371	Sym	67	57.143	ENSCHOG00000012456	SYMPK	72	57.143	Choloepus_hoffmanni
FBgn0037371	Sym	94	36.931	ENSCPBG00000007170	SYMPK	87	36.931	Chrysemys_picta_bellii
FBgn0037371	Sym	89	35.876	ENSCING00000021232	-	94	35.876	Ciona_intestinalis
FBgn0037371	Sym	89	34.916	ENSCSAVG00000005154	-	99	34.916	Ciona_savignyi
FBgn0037371	Sym	97	36.507	ENSCANG00000040907	SYMPK	97	36.920	Colobus_angolensis_palliatus
FBgn0037371	Sym	81	41.207	ENSCGRG00001010086	Sympk	78	41.207	Cricetulus_griseus_chok1gshd
FBgn0037371	Sym	93	36.919	ENSCSEG00000016802	sympk	88	36.919	Cynoglossus_semilaevis
FBgn0037371	Sym	98	36.348	ENSDARG00000059553	sympk	86	36.947	Danio_rerio
FBgn0037371	Sym	95	36.702	ENSDNOG00000016149	SYMPK	86	36.702	Dasypus_novemcinctus
FBgn0037371	Sym	70	37.260	ENSEBUG00000000387	sympk	84	37.260	Eptatretus_burgeri
FBgn0037371	Sym	95	36.908	ENSEASG00005014227	SYMPK	86	36.908	Equus_asinus_asinus
FBgn0037371	Sym	95	36.908	ENSECAG00000008163	SYMPK	86	36.908	Equus_caballus
FBgn0037371	Sym	65	44.048	ENSEEUG00000000270	-	70	44.048	Erinaceus_europaeus
FBgn0037371	Sym	93	37.186	ENSELUG00000000850	sympk	86	37.243	Esox_lucius
FBgn0037371	Sym	95	37.044	ENSFCAG00000007337	SYMPK	86	37.044	Felis_catus
FBgn0037371	Sym	95	36.922	ENSFDAG00000011272	SYMPK	86	36.922	Fukomys_damarensis
FBgn0037371	Sym	90	37.546	ENSFHEG00000010274	sympk	86	37.546	Fundulus_heteroclitus
FBgn0037371	Sym	92	36.271	ENSGMOG00000002357	sympk	98	36.271	Gadus_morhua
FBgn0037371	Sym	92	37.014	ENSGAFG00000010976	sympk	88	37.192	Gambusia_affinis
FBgn0037371	Sym	92	37.341	ENSGACG00000002735	sympk	96	37.341	Gasterosteus_aculeatus
FBgn0037371	Sym	59	35.931	ENSGAGG00000012538	-	87	36.161	Gopherus_agassizii
FBgn0037371	Sym	95	36.866	ENSGGOG00000003410	SYMPK	99	36.748	Gorilla_gorilla
FBgn0037371	Sym	91	37.167	ENSHBUG00000023564	sympk	86	37.167	Haplochromis_burtoni
FBgn0037371	Sym	94	35.420	ENSHGLG00000005228	SYMPK	85	35.420	Heterocephalus_glaber_female
FBgn0037371	Sym	94	36.861	ENSHGLG00100018571	SYMPK	87	36.861	Heterocephalus_glaber_male
FBgn0037371	Sym	94	34.681	ENSHCOG00000017400	sympk	91	34.681	Hippocampus_comes
FBgn0037371	Sym	95	36.444	ENSIPUG00000024020	SYMPK	89	36.356	Ictalurus_punctatus
FBgn0037371	Sym	95	37.024	ENSSTOG00000001534	SYMPK	86	37.024	Ictidomys_tridecemlineatus
FBgn0037371	Sym	95	36.767	ENSJJAG00000006633	Sympk	86	36.767	Jaculus_jaculus
FBgn0037371	Sym	91	37.130	ENSKMAG00000016292	sympk	86	37.268	Kryptolebias_marmoratus
FBgn0037371	Sym	92	36.937	ENSLBEG00000027913	sympk	94	34.465	Labrus_bergylta
FBgn0037371	Sym	50	40.311	ENSLACG00000016497	SYMPK	91	36.067	Latimeria_chalumnae
FBgn0037371	Sym	95	37.044	ENSLAFG00000008726	SYMPK	86	37.044	Loxodonta_africana
FBgn0037371	Sym	95	36.729	ENSMMUG00000015428	SYMPK	93	34.777	Macaca_mulatta
FBgn0037371	Sym	95	36.729	ENSMNEG00000019439	SYMPK	99	36.731	Macaca_nemestrina
FBgn0037371	Sym	95	36.729	ENSMLEG00000040508	SYMPK	99	36.731	Mandrillus_leucophaeus
FBgn0037371	Sym	90	37.792	ENSMAMG00000010486	sympk	86	37.908	Mastacembelus_armatus
FBgn0037371	Sym	91	37.546	ENSMZEG00005014146	sympk	86	37.546	Maylandia_zebra
FBgn0037371	Sym	93	36.894	ENSMAUG00000015657	Sympk	85	36.894	Mesocricetus_auratus
FBgn0037371	Sym	95	36.631	ENSMICG00000001871	SYMPK	91	34.455	Microcebus_murinus
FBgn0037371	Sym	95	36.436	ENSMOCG00000008388	Sympk	86	36.436	Microtus_ochrogaster
FBgn0037371	Sym	93	35.649	ENSMMOG00000019227	sympk	92	35.649	Mola_mola
FBgn0037371	Sym	95	37.211	ENSMODG00000021534	SYMPK	86	37.211	Monodelphis_domestica
FBgn0037371	Sym	74	35.261	ENSMALG00000008347	sympk	89	35.261	Monopterus_albus
FBgn0037371	Sym	95	36.356	MGP_CAROLIEiJ_G0029267	Sympk	78	54.955	Mus_caroli
FBgn0037371	Sym	95	36.356	ENSMUSG00000023118	Sympk	78	54.955	Mus_musculus
FBgn0037371	Sym	95	36.444	MGP_PahariEiJ_G0021127	Sympk	82	52.991	Mus_pahari
FBgn0037371	Sym	95	36.444	MGP_SPRETEiJ_G0030351	-	78	54.955	Mus_spretus
FBgn0037371	Sym	95	36.673	ENSMPUG00000005505	SYMPK	86	36.275	Mustela_putorius_furo
FBgn0037371	Sym	76	36.313	ENSMLUG00000001359	SYMPK	90	35.653	Myotis_lucifugus
FBgn0037371	Sym	95	36.711	ENSNGAG00000000820	Sympk	86	36.711	Nannospalax_galili
FBgn0037371	Sym	93	36.323	ENSNBRG00000018101	sympk	94	36.323	Neolamprologus_brichardi
FBgn0037371	Sym	92	34.131	ENSNLEG00000002369	SYMPK	83	34.133	Nomascus_leucogenys
FBgn0037371	Sym	71	49.627	ENSMEUG00000003866	SYMPK	66	49.627	Notamacropus_eugenii
FBgn0037371	Sym	95	35.733	ENSOPRG00000009967	SYMPK	88	35.243	Ochotona_princeps
FBgn0037371	Sym	95	36.879	ENSODEG00000007519	SYMPK	86	37.228	Octodon_degus
FBgn0037371	Sym	91	37.662	ENSONIG00000016802	sympk	92	37.662	Oreochromis_niloticus
FBgn0037371	Sym	83	34.483	ENSOCUG00000005511	SYMPK	90	34.483	Oryctolagus_cuniculus
FBgn0037371	Sym	91	37.222	ENSORLG00000015338	sympk	95	34.755	Oryzias_latipes
FBgn0037371	Sym	91	37.130	ENSORLG00020004402	sympk	89	36.636	Oryzias_latipes_hni
FBgn0037371	Sym	91	37.130	ENSORLG00015005712	sympk	89	36.636	Oryzias_latipes_hsok
FBgn0037371	Sym	91	37.569	ENSOMEG00000022561	sympk	88	37.569	Oryzias_melastigma
FBgn0037371	Sym	95	37.024	ENSOGAG00000013483	SYMPK	86	37.024	Otolemur_garnettii
FBgn0037371	Sym	93	35.592	ENSOARG00000010349	SYMPK	85	35.772	Ovis_aries
FBgn0037371	Sym	95	36.729	ENSPPAG00000043204	SYMPK	93	34.450	Pan_paniscus
FBgn0037371	Sym	95	37.044	ENSPPRG00000004282	SYMPK	86	37.044	Panthera_pardus
FBgn0037371	Sym	95	37.044	ENSPTIG00000015420	SYMPK	92	36.988	Panthera_tigris_altaica
FBgn0037371	Sym	95	36.729	ENSPTRG00000011169	SYMPK	93	34.450	Pan_troglodytes
FBgn0037371	Sym	95	36.729	ENSPANG00000019930	SYMPK	99	36.731	Papio_anubis
FBgn0037371	Sym	92	36.207	ENSPKIG00000017132	sympk	93	33.511	Paramormyrops_kingsleyae
FBgn0037371	Sym	95	36.847	ENSPEMG00000007564	Sympk	86	36.847	Peromyscus_maniculatus_bairdii
FBgn0037371	Sym	87	37.238	ENSPMAG00000004936	sympk	98	37.405	Petromyzon_marinus
FBgn0037371	Sym	97	36.851	ENSPCIG00000024476	SYMPK	92	35.828	Phascolarctos_cinereus
FBgn0037371	Sym	91	37.279	ENSPFOG00000001194	sympk	86	37.407	Poecilia_formosa
FBgn0037371	Sym	91	37.279	ENSPLAG00000012995	sympk	86	37.407	Poecilia_latipinna
FBgn0037371	Sym	91	37.454	ENSPMEG00000008099	sympk	86	37.500	Poecilia_mexicana
FBgn0037371	Sym	91	37.361	ENSPREG00000006176	sympk	87	38.053	Poecilia_reticulata
FBgn0037371	Sym	95	36.640	ENSPPYG00000010135	SYMPK	98	36.640	Pongo_abelii
FBgn0037371	Sym	87	38.926	ENSPCAG00000005182	SYMPK	79	38.926	Procavia_capensis
FBgn0037371	Sym	95	36.776	ENSPCOG00000023740	SYMPK	98	37.164	Propithecus_coquereli
FBgn0037371	Sym	95	36.275	ENSPVAG00000001355	SYMPK	88	36.275	Pteropus_vampyrus
FBgn0037371	Sym	91	37.167	ENSPNYG00000011455	sympk	86	37.167	Pundamilia_nyererei
FBgn0037371	Sym	95	35.626	ENSPNAG00000016505	sympk	88	35.771	Pygocentrus_nattereri
FBgn0037371	Sym	95	36.622	ENSRNOG00000014353	Sympk	86	36.622	Rattus_norvegicus
FBgn0037371	Sym	97	36.245	ENSRBIG00000040963	SYMPK	98	36.975	Rhinopithecus_bieti
FBgn0037371	Sym	95	36.729	ENSRROG00000024834	SYMPK	96	36.564	Rhinopithecus_roxellana
FBgn0037371	Sym	95	36.729	ENSSBOG00000034497	SYMPK	96	34.853	Saimiri_boliviensis_boliviensis
FBgn0037371	Sym	95	36.879	ENSSHAG00000003139	SYMPK	96	36.879	Sarcophilus_harrisii
FBgn0037371	Sym	91	36.780	ENSSFOG00015006974	sympk	86	36.770	Scleropages_formosus
FBgn0037371	Sym	90	37.757	ENSSMAG00000018130	sympk	69	37.850	Scophthalmus_maximus
FBgn0037371	Sym	91	37.558	ENSSDUG00000007092	sympk	86	37.593	Seriola_dumerili
FBgn0037371	Sym	91	37.558	ENSSLDG00000014774	sympk	99	33.860	Seriola_lalandi_dorsalis
FBgn0037371	Sym	95	36.396	ENSSPUG00000002789	SYMPK	84	36.396	Sphenodon_punctatus
FBgn0037371	Sym	91	37.870	ENSSPAG00000000854	sympk	86	37.870	Stegastes_partitus
FBgn0037371	Sym	95	36.809	ENSSSCG00000003093	SYMPK	86	36.809	Sus_scrofa
FBgn0037371	Sym	93	36.314	ENSTRUG00000010202	sympk	92	36.014	Takifugu_rubripes
FBgn0037371	Sym	91	36.876	ENSTNIG00000017855	sympk	94	36.876	Tetraodon_nigroviridis
FBgn0037371	Sym	69	58.824	ENSTBEG00000000454	SYMPK	63	58.824	Tupaia_belangeri
FBgn0037371	Sym	89	45.652	ENSTTRG00000014311	SYMPK	82	45.652	Tursiops_truncatus
FBgn0037371	Sym	95	36.453	ENSUAMG00000022272	SYMPK	95	34.404	Ursus_americanus
FBgn0037371	Sym	95	37.044	ENSUMAG00000023698	SYMPK	86	37.044	Ursus_maritimus
FBgn0037371	Sym	95	36.955	ENSVVUG00000003024	SYMPK	95	36.955	Vulpes_vulpes
FBgn0037371	Sym	92	36.682	ENSXETG00000024453	sympk	88	36.682	Xenopus_tropicalis
FBgn0037371	Sym	92	36.126	ENSXCOG00000015368	sympk	99	36.331	Xiphophorus_couchianus
FBgn0037371	Sym	92	36.866	ENSXMAG00000005737	sympk	88	37.044	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005515	protein binding	19450530.	IPI	Function
GO:0005634	nucleus	18042462.	IDA	Component
GO:0005847	mRNA cleavage and polyadenylation specificity factor complex	19450530.	IDA	Component
GO:0006378	mRNA polyadenylation	19450530.25493544.	IMP	Process
GO:0006398	mRNA 3'-end processing by stem-loop binding and cleavage	18042462.19450530.25493544.	IMP	Process
GO:0035363	histone locus body	18042462.25493544.	IDA	Component
GO:0061689	tricellular tight junction	25493544.	IDA	Component