EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0037435 (Gene tree)
Gene ID: 40782
Gene Symbol: CG18048
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 1409 bases
Position: chr3R:6346111-6347519
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0081209	TRM13	PF05206.14	9.8e-91	1	1
FBpp0081209	zf-U11-48K	PF05253.12	6.4e-07	1	1
FBpp0081209	zf-TRM13_CCCH	PF11722.8	1.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0081712	-	1409	-	FBpp0081209	441 (aa)	-	Q8SX24

Gene Model

Click here to download FBgn0037435's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0037435's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0037435	CG18048	94	30.818	ENSG00000122435	TRMT13	95	30.818	Homo_sapiens
FBgn0037435	CG18048	95	32.470	ENSAPOG00000015131	trmt13	99	32.072	Acanthochromis_polyacanthus
FBgn0037435	CG18048	95	31.405	ENSAMEG00000008917	TRMT13	96	32.359	Ailuropoda_melanoleuca
FBgn0037435	CG18048	98	33.402	ENSACIG00000005804	trmt13	96	33.404	Amphilophus_citrinellus
FBgn0037435	CG18048	95	31.673	ENSAOCG00000023585	trmt13	99	31.275	Amphiprion_ocellaris
FBgn0037435	CG18048	95	31.673	ENSAPEG00000004025	trmt13	99	31.275	Amphiprion_percula
FBgn0037435	CG18048	95	34.591	ENSATEG00000006597	trmt13	96	34.382	Anabas_testudineus
FBgn0037435	CG18048	83	35.697	ENSAPLG00000014924	TRMT13	98	35.697	Anas_platyrhynchos
FBgn0037435	CG18048	94	33.898	ENSACAG00000003498	TRMT13	97	33.898	Anolis_carolinensis
FBgn0037435	CG18048	94	30.083	ENSANAG00000019525	TRMT13	95	30.083	Aotus_nancymaae
FBgn0037435	CG18048	95	35.088	ENSACLG00000020018	trmt13	99	35.088	Astatotilapia_calliptera
FBgn0037435	CG18048	94	35.032	ENSAMXG00000017963	trmt13	97	35.032	Astyanax_mexicanus
FBgn0037435	CG18048	94	30.189	ENSBTAG00000015781	TRMT13	95	30.189	Bos_taurus
FBgn0037435	CG18048	56	30.945	ENSCAFG00000020021	TRMT13	96	30.945	Canis_familiaris
FBgn0037435	CG18048	65	32.404	ENSCAFG00020011572	TRMT13	92	32.404	Canis_lupus_dingo
FBgn0037435	CG18048	95	30.353	ENSCHIG00000015395	TRMT13	96	30.353	Capra_hircus
FBgn0037435	CG18048	96	31.546	ENSCPOG00000000694	TRMT13	97	31.546	Cavia_porcellus
FBgn0037435	CG18048	94	30.290	ENSCCAG00000023772	TRMT13	95	30.290	Cebus_capucinus
FBgn0037435	CG18048	94	31.027	ENSCATG00000033556	TRMT13	95	31.027	Cercocebus_atys
FBgn0037435	CG18048	83	31.678	ENSCLAG00000008220	TRMT13	98	31.678	Chinchilla_lanigera
FBgn0037435	CG18048	94	31.237	ENSCSAG00000001506	TRMT13	95	31.237	Chlorocebus_sabaeus
FBgn0037435	CG18048	96	34.511	ENSCPBG00000026671	TRMT13	97	34.511	Chrysemys_picta_bellii
FBgn0037435	CG18048	94	31.027	ENSCANG00000034659	TRMT13	95	31.027	Colobus_angolensis_palliatus
FBgn0037435	CG18048	94	32.158	ENSCGRG00001021601	Trmt13	95	31.535	Cricetulus_griseus_chok1gshd
FBgn0037435	CG18048	95	35.227	ENSCSEG00000000591	trmt13	98	35.227	Cynoglossus_semilaevis
FBgn0037435	CG18048	97	34.082	ENSCVAG00000017342	trmt13	96	33.878	Cyprinodon_variegatus
FBgn0037435	CG18048	96	35.244	ENSDARG00000102846	trmt13	98	35.244	Danio_rerio
FBgn0037435	CG18048	65	34.146	ENSDNOG00000001710	TRMT13	82	32.753	Dasypus_novemcinctus
FBgn0037435	CG18048	94	30.462	ENSDORG00000015808	Trmt13	95	30.462	Dipodomys_ordii
FBgn0037435	CG18048	93	34.354	ENSEBUG00000014444	trmt13	99	33.249	Eptatretus_burgeri
FBgn0037435	CG18048	96	31.677	ENSEASG00005015918	TRMT13	97	31.677	Equus_asinus_asinus
FBgn0037435	CG18048	96	31.470	ENSECAG00000022626	TRMT13	97	31.470	Equus_caballus
FBgn0037435	CG18048	70	39.344	ENSEEUG00000000294	TRMT13	62	39.344	Erinaceus_europaeus
FBgn0037435	CG18048	95	33.612	ENSELUG00000003803	trmt13	97	33.333	Esox_lucius
FBgn0037435	CG18048	94	31.447	ENSFCAG00000030618	TRMT13	95	31.447	Felis_catus
FBgn0037435	CG18048	93	35.106	ENSFALG00000002424	TRMT13	95	35.106	Ficedula_albicollis
FBgn0037435	CG18048	94	31.303	ENSFDAG00000006342	TRMT13	95	31.303	Fukomys_damarensis
FBgn0037435	CG18048	80	34.243	ENSFHEG00000022954	trmt13	94	34.243	Fundulus_heteroclitus
FBgn0037435	CG18048	93	32.500	ENSGMOG00000013223	trmt13	99	32.273	Gadus_morhua
FBgn0037435	CG18048	94	34.395	ENSGALG00000005290	TRMT13	96	34.810	Gallus_gallus
FBgn0037435	CG18048	79	36.243	ENSGAFG00000001577	trmt13	83	35.789	Gambusia_affinis
FBgn0037435	CG18048	98	37.916	ENSGACG00000013428	trmt13	99	37.916	Gasterosteus_aculeatus
FBgn0037435	CG18048	96	34.719	ENSGAGG00000023303	TRMT13	95	37.276	Gopherus_agassizii
FBgn0037435	CG18048	94	30.608	ENSGGOG00000005616	TRMT13	95	30.608	Gorilla_gorilla
FBgn0037435	CG18048	95	35.076	ENSHBUG00000007754	trmt13	99	35.076	Haplochromis_burtoni
FBgn0037435	CG18048	94	31.092	ENSHGLG00000002164	TRMT13	95	31.303	Heterocephalus_glaber_female
FBgn0037435	CG18048	94	31.092	ENSHGLG00100001618	TRMT13	95	31.303	Heterocephalus_glaber_male
FBgn0037435	CG18048	94	34.101	ENSHCOG00000020553	trmt13	96	34.101	Hippocampus_comes
FBgn0037435	CG18048	94	35.345	ENSIPUG00000024787	trmt13	98	35.129	Ictalurus_punctatus
FBgn0037435	CG18048	95	30.290	ENSSTOG00000013483	TRMT13	97	30.290	Ictidomys_tridecemlineatus
FBgn0037435	CG18048	95	31.612	ENSJJAG00000018012	Trmt13	98	31.612	Jaculus_jaculus
FBgn0037435	CG18048	57	34.014	ENSKMAG00000007639	trmt13	93	34.014	Kryptolebias_marmoratus
FBgn0037435	CG18048	95	33.473	ENSLBEG00000020238	trmt13	99	32.845	Labrus_bergylta
FBgn0037435	CG18048	96	33.063	ENSLACG00000013153	TRMT13	99	33.063	Latimeria_chalumnae
FBgn0037435	CG18048	94	35.332	ENSLOCG00000000418	trmt13	97	35.974	Lepisosteus_oculatus
FBgn0037435	CG18048	94	31.237	ENSMFAG00000034681	TRMT13	95	31.237	Macaca_fascicularis
FBgn0037435	CG18048	94	31.237	ENSMMUG00000004243	TRMT13	95	31.237	Macaca_mulatta
FBgn0037435	CG18048	94	31.237	ENSMNEG00000036102	TRMT13	95	31.237	Macaca_nemestrina
FBgn0037435	CG18048	94	31.237	ENSMLEG00000034258	TRMT13	95	31.237	Mandrillus_leucophaeus
FBgn0037435	CG18048	94	33.475	ENSMAMG00000016597	trmt13	96	33.049	Mastacembelus_armatus
FBgn0037435	CG18048	95	35.088	ENSMZEG00005020959	trmt13	99	35.088	Maylandia_zebra
FBgn0037435	CG18048	83	35.867	ENSMGAG00000006970	TRMT13	98	35.867	Meleagris_gallopavo
FBgn0037435	CG18048	95	31.481	ENSMAUG00000010448	Trmt13	96	31.481	Mesocricetus_auratus
FBgn0037435	CG18048	94	30.818	ENSMICG00000005283	TRMT13	95	30.818	Microcebus_murinus
FBgn0037435	CG18048	94	32.091	ENSMOCG00000019914	Trmt13	95	32.091	Microtus_ochrogaster
FBgn0037435	CG18048	96	33.402	ENSMODG00000003646	TRMT13	97	33.402	Monodelphis_domestica
FBgn0037435	CG18048	96	34.839	ENSMALG00000020965	trmt13	98	34.409	Monopterus_albus
FBgn0037435	CG18048	96	32.298	MGP_CAROLIEiJ_G0025568	Trmt13	96	32.158	Mus_caroli
FBgn0037435	CG18048	95	32.150	ENSMUSG00000033439	Trmt13	96	32.150	Mus_musculus
FBgn0037435	CG18048	95	31.733	MGP_PahariEiJ_G0027014	Trmt13	96	31.733	Mus_pahari
FBgn0037435	CG18048	94	32.285	MGP_SPRETEiJ_G0026518	Trmt13	95	32.285	Mus_spretus
FBgn0037435	CG18048	69	30.252	ENSMPUG00000002078	-	95	30.252	Mustela_putorius_furo
FBgn0037435	CG18048	95	32.158	ENSMLUG00000002124	TRMT13	97	32.158	Myotis_lucifugus
FBgn0037435	CG18048	97	31.760	ENSNBRG00000006783	trmt13	99	31.760	Neolamprologus_brichardi
FBgn0037435	CG18048	94	30.608	ENSNLEG00000035917	TRMT13	95	30.608	Nomascus_leucogenys
FBgn0037435	CG18048	62	32.491	ENSOPRG00000012048	TRMT13	54	32.491	Ochotona_princeps
FBgn0037435	CG18048	95	35.294	ENSONIG00000004574	trmt13	99	35.294	Oreochromis_niloticus
FBgn0037435	CG18048	84	32.564	ENSOANG00000012057	TRMT13	98	32.564	Ornithorhynchus_anatinus
FBgn0037435	CG18048	95	30.453	ENSOCUG00000023095	TRMT13	97	30.453	Oryctolagus_cuniculus
FBgn0037435	CG18048	95	32.059	ENSORLG00000003320	trmt13	98	32.839	Oryzias_latipes
FBgn0037435	CG18048	94	34.194	ENSORLG00020005972	trmt13	97	34.194	Oryzias_latipes_hni
FBgn0037435	CG18048	95	35.043	ENSORLG00015002270	trmt13	98	35.684	Oryzias_latipes_hsok
FBgn0037435	CG18048	94	34.267	ENSOMEG00000006724	trmt13	93	34.914	Oryzias_melastigma
FBgn0037435	CG18048	94	31.743	ENSOGAG00000005618	TRMT13	95	31.984	Otolemur_garnettii
FBgn0037435	CG18048	95	30.353	ENSOARG00000017983	TRMT13	96	30.353	Ovis_aries
FBgn0037435	CG18048	94	30.818	ENSPPAG00000043736	TRMT13	95	30.818	Pan_paniscus
FBgn0037435	CG18048	94	31.866	ENSPPRG00000003424	TRMT13	95	31.866	Panthera_pardus
FBgn0037435	CG18048	94	31.866	ENSPTIG00000018598	TRMT13	95	31.866	Panthera_tigris_altaica
FBgn0037435	CG18048	95	30.753	ENSPTRG00000001001	TRMT13	96	30.753	Pan_troglodytes
FBgn0037435	CG18048	94	31.027	ENSPANG00000007598	TRMT13	95	31.027	Papio_anubis
FBgn0037435	CG18048	93	35.449	ENSPKIG00000001514	trmt13	96	35.449	Paramormyrops_kingsleyae
FBgn0037435	CG18048	85	32.102	ENSPSIG00000012703	TRMT13	99	32.102	Pelodiscus_sinensis
FBgn0037435	CG18048	97	33.978	ENSPMGG00000013298	trmt13	95	33.978	Periophthalmus_magnuspinnatus
FBgn0037435	CG18048	94	31.743	ENSPEMG00000000275	Trmt13	95	31.743	Peromyscus_maniculatus_bairdii
FBgn0037435	CG18048	94	35.430	ENSPMAG00000000823	trmt13	98	35.430	Petromyzon_marinus
FBgn0037435	CG18048	94	32.985	ENSPCIG00000007699	TRMT13	96	32.985	Phascolarctos_cinereus
FBgn0037435	CG18048	95	36.123	ENSPFOG00000008675	trmt13	96	36.123	Poecilia_formosa
FBgn0037435	CG18048	95	35.512	ENSPLAG00000009709	trmt13	99	35.512	Poecilia_latipinna
FBgn0037435	CG18048	95	34.641	ENSPMEG00000022954	trmt13	99	34.641	Poecilia_mexicana
FBgn0037435	CG18048	79	35.263	ENSPREG00000005645	trmt13	92	32.226	Poecilia_reticulata
FBgn0037435	CG18048	93	31.144	ENSPPYG00000001120	TRMT13	94	31.144	Pongo_abelii
FBgn0037435	CG18048	94	30.818	ENSPCAG00000002340	TRMT13	95	30.818	Procavia_capensis
FBgn0037435	CG18048	94	31.237	ENSPCOG00000017984	TRMT13	95	31.237	Propithecus_coquereli
FBgn0037435	CG18048	96	31.263	ENSPVAG00000017430	TRMT13	97	31.263	Pteropus_vampyrus
FBgn0037435	CG18048	95	33.333	ENSPNYG00000013690	trmt13	99	33.333	Pundamilia_nyererei
FBgn0037435	CG18048	94	34.672	ENSPNAG00000022130	trmt13	98	34.672	Pygocentrus_nattereri
FBgn0037435	CG18048	96	32.091	ENSRNOG00000015140	Trmt13	94	32.091	Rattus_norvegicus
FBgn0037435	CG18048	94	31.027	ENSRBIG00000037686	TRMT13	95	31.027	Rhinopithecus_bieti
FBgn0037435	CG18048	94	31.027	ENSRROG00000044057	TRMT13	95	31.027	Rhinopithecus_roxellana
FBgn0037435	CG18048	95	32.653	YOL125W	-	98	32.449	Saccharomyces_cerevisiae
FBgn0037435	CG18048	94	30.498	ENSSBOG00000026541	TRMT13	95	30.498	Saimiri_boliviensis_boliviensis
FBgn0037435	CG18048	84	30.805	ENSSHAG00000005213	TRMT13	94	30.805	Sarcophilus_harrisii
FBgn0037435	CG18048	97	33.891	ENSSFOG00015017560	trmt13	99	34.249	Scleropages_formosus
FBgn0037435	CG18048	94	33.192	ENSSMAG00000014592	trmt13	95	33.192	Scophthalmus_maximus
FBgn0037435	CG18048	96	33.333	ENSSDUG00000015508	trmt13	97	33.197	Seriola_dumerili
FBgn0037435	CG18048	97	33.742	ENSSLDG00000019060	trmt13	98	33.538	Seriola_lalandi_dorsalis
FBgn0037435	CG18048	94	33.753	ENSSPUG00000016339	TRMT13	99	33.543	Sphenodon_punctatus
FBgn0037435	CG18048	94	34.690	ENSSPAG00000011922	trmt13	98	34.328	Stegastes_partitus
FBgn0037435	CG18048	95	30.898	ENSSSCG00000006869	TRMT13	96	30.898	Sus_scrofa
FBgn0037435	CG18048	96	33.958	ENSTGUG00000005253	TRMT13	98	34.244	Taeniopygia_guttata
FBgn0037435	CG18048	94	34.490	ENSTRUG00000008400	trmt13	98	33.978	Takifugu_rubripes
FBgn0037435	CG18048	66	37.762	ENSTBEG00000008911	TRMT13	74	37.762	Tupaia_belangeri
FBgn0037435	CG18048	95	30.992	ENSUAMG00000017251	TRMT13	96	30.992	Ursus_americanus
FBgn0037435	CG18048	95	31.405	ENSUMAG00000007901	TRMT13	98	30.734	Ursus_maritimus
FBgn0037435	CG18048	94	31.447	ENSVVUG00000021996	TRMT13	95	31.447	Vulpes_vulpes
FBgn0037435	CG18048	95	35.870	ENSXETG00000013204	trmt13	97	35.652	Xenopus_tropicalis
FBgn0037435	CG18048	95	34.641	ENSXMAG00000010765	trmt13	99	35.870	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0008175	tRNA methyltransferase activity	21873635.	IBA	Function
GO:0030488	tRNA methylation	21873635.	IBA	Process
GO:0106050	tRNA 2'-O-methyltransferase activity	-	IEA	Function