EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0037550 (Gene tree)
Gene ID: 40960
Gene Symbol: CG9667
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 1068 bases
Position: chr3R:8125290-8126357
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0081305	Isy1	PF06246.12	4.6e-96	1	1
FBpp0308781	Isy1	PF06246.12	1.1e-89	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0339725	-	838	-	FBpp0308781	264 (aa)	-	A0A0B4LGT9
FBtr0081815	-	883	-	FBpp0081305	272 (aa)	-	A0A0B4LGT9

Gene Model

Click here to download FBgn0037550's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0037550's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0037550	CG9667	99	60.727	ENSG00000261796	ISY1-RAB43	82	60.727	Homo_sapiens
FBgn0037550	CG9667	99	60.727	ENSG00000240682	ISY1	79	76.923	Homo_sapiens
FBgn0037550	CG9667	99	60.949	ENSAMEG00000015341	-	82	60.949	Ailuropoda_melanoleuca
FBgn0037550	CG9667	72	68.473	ENSACIG00000014723	isy1	82	68.473	Amphilophus_citrinellus
FBgn0037550	CG9667	99	61.905	ENSAOCG00000007147	isy1	95	61.905	Amphiprion_ocellaris
FBgn0037550	CG9667	99	56.106	ENSAPEG00000021883	isy1	96	56.106	Amphiprion_percula
FBgn0037550	CG9667	63	71.515	ENSATEG00000009521	isy1	67	71.515	Anabas_testudineus
FBgn0037550	CG9667	99	53.788	ENSAPLG00000014136	-	95	52.747	Anas_platyrhynchos
FBgn0037550	CG9667	92	64.754	ENSACAG00000013166	-	93	64.754	Anolis_carolinensis
FBgn0037550	CG9667	99	60.364	ENSANAG00000027120	-	95	60.364	Aotus_nancymaae
FBgn0037550	CG9667	99	55.597	ENSACLG00000014430	isy1	95	54.513	Astatotilapia_calliptera
FBgn0037550	CG9667	99	63.736	ENSAMXG00000005423	isy1	94	63.736	Astyanax_mexicanus
FBgn0037550	CG9667	99	60.145	ENSBTAG00000030915	ISY1	95	60.949	Bos_taurus
FBgn0037550	CG9667	98	50.186	WBGene00009966	isy-1	99	50.186	Caenorhabditis_elegans
FBgn0037550	CG9667	99	60.727	ENSCJAG00000017419	-	95	60.727	Callithrix_jacchus
FBgn0037550	CG9667	99	61.091	ENSCAFG00000004333	ISY1	95	61.091	Canis_familiaris
FBgn0037550	CG9667	99	61.091	ENSCAFG00020004867	-	95	61.091	Canis_lupus_dingo
FBgn0037550	CG9667	99	60.870	ENSCHIG00000008237	-	95	60.584	Capra_hircus
FBgn0037550	CG9667	99	61.091	ENSTSYG00000013897	-	95	61.091	Carlito_syrichta
FBgn0037550	CG9667	99	48.092	ENSCAPG00000016359	-	94	48.302	Cavia_aperea
FBgn0037550	CG9667	99	61.091	ENSCPOG00000014735	-	95	61.091	Cavia_porcellus
FBgn0037550	CG9667	99	60.727	ENSCCAG00000028517	-	95	60.727	Cebus_capucinus
FBgn0037550	CG9667	99	60.727	ENSCATG00000030672	-	95	60.727	Cercocebus_atys
FBgn0037550	CG9667	99	60.357	ENSCLAG00000007518	-	95	60.507	Chinchilla_lanigera
FBgn0037550	CG9667	99	60.727	ENSCSAG00000008798	-	95	60.727	Chlorocebus_sabaeus
FBgn0037550	CG9667	99	62.731	ENSCPBG00000026346	-	95	63.469	Chrysemys_picta_bellii
FBgn0037550	CG9667	99	54.815	ENSCING00000000716	-	95	54.815	Ciona_intestinalis
FBgn0037550	CG9667	99	56.089	ENSCSAVG00000008992	-	95	54.982	Ciona_savignyi
FBgn0037550	CG9667	99	60.727	ENSCANG00000037761	-	95	60.727	Colobus_angolensis_palliatus
FBgn0037550	CG9667	99	61.091	ENSCGRG00001003415	Isy1	95	61.091	Cricetulus_griseus_chok1gshd
FBgn0037550	CG9667	99	61.091	ENSCGRG00000011641	Isy1	95	61.091	Cricetulus_griseus_crigri
FBgn0037550	CG9667	93	57.422	ENSCSEG00000020382	isy1	95	57.143	Cynoglossus_semilaevis
FBgn0037550	CG9667	99	62.362	ENSCVAG00000000650	isy1	95	62.362	Cyprinodon_variegatus
FBgn0037550	CG9667	99	63.370	ENSDARG00000063466	isy1	94	63.838	Danio_rerio
FBgn0037550	CG9667	99	61.765	ENSDNOG00000002763	-	95	61.765	Dasypus_novemcinctus
FBgn0037550	CG9667	99	59.851	ENSDORG00000006886	Isy1	95	60.076	Dipodomys_ordii
FBgn0037550	CG9667	99	60.456	ENSETEG00000017009	-	96	60.526	Echinops_telfairi
FBgn0037550	CG9667	99	56.180	ENSEASG00005015810	-	92	56.180	Equus_asinus_asinus
FBgn0037550	CG9667	99	61.397	ENSECAG00000013768	-	88	61.397	Equus_caballus
FBgn0037550	CG9667	99	62.590	ENSELUG00000000489	isy1	95	63.370	Esox_lucius
FBgn0037550	CG9667	99	61.091	ENSFCAG00000008664	-	95	61.091	Felis_catus
FBgn0037550	CG9667	99	61.905	ENSFALG00000014998	-	95	61.993	Ficedula_albicollis
FBgn0037550	CG9667	99	64.103	ENSFALG00000000023	-	95	64.945	Ficedula_albicollis
FBgn0037550	CG9667	99	58.824	ENSFDAG00000012661	-	90	59.630	Fukomys_damarensis
FBgn0037550	CG9667	99	62.500	ENSFHEG00000006776	isy1	95	61.993	Fundulus_heteroclitus
FBgn0037550	CG9667	65	64.045	ENSGMOG00000005635	isy1	59	64.045	Gadus_morhua
FBgn0037550	CG9667	99	62.182	ENSGALG00000005012	-	95	63.603	Gallus_gallus
FBgn0037550	CG9667	99	60.584	ENSGAFG00000019550	isy1	96	60.949	Gambusia_affinis
FBgn0037550	CG9667	99	57.971	ENSGACG00000003342	isy1	95	61.314	Gasterosteus_aculeatus
FBgn0037550	CG9667	99	61.654	ENSGAGG00000021274	-	92	64.777	Gopherus_agassizii
FBgn0037550	CG9667	99	60.727	ENSGGOG00000038733	ISY1	95	60.727	Gorilla_gorilla
FBgn0037550	CG9667	100	45.196	ENSHGLG00000017889	-	76	45.487	Heterocephalus_glaber_female
FBgn0037550	CG9667	99	60.432	ENSHGLG00000002576	-	95	61.232	Heterocephalus_glaber_female
FBgn0037550	CG9667	99	59.108	ENSHGLG00100004254	-	95	59.206	Heterocephalus_glaber_male
FBgn0037550	CG9667	100	45.196	ENSHGLG00100005531	-	76	45.487	Heterocephalus_glaber_male
FBgn0037550	CG9667	99	58.394	ENSHCOG00000014775	isy1	95	58.394	Hippocampus_comes
FBgn0037550	CG9667	99	62.963	ENSIPUG00000011379	Isy1	94	64.207	Ictalurus_punctatus
FBgn0037550	CG9667	99	60.215	ENSSTOG00000024769	-	95	60.364	Ictidomys_tridecemlineatus
FBgn0037550	CG9667	80	59.155	ENSJJAG00000009635	Isy1	90	59.070	Jaculus_jaculus
FBgn0037550	CG9667	99	62.868	ENSLACG00000004490	isy1	95	62.868	Latimeria_chalumnae
FBgn0037550	CG9667	99	60.727	ENSLOCG00000013988	isy1	94	62.731	Lepisosteus_oculatus
FBgn0037550	CG9667	99	53.137	ENSLAFG00000004015	-	95	52.555	Loxodonta_africana
FBgn0037550	CG9667	99	60.727	ENSMFAG00000037074	-	95	60.727	Macaca_fascicularis
FBgn0037550	CG9667	99	60.727	ENSMMUG00000011580	ISY1-RAB43	95	60.727	Macaca_mulatta
FBgn0037550	CG9667	99	53.285	ENSMNEG00000043206	ISY1	95	53.285	Macaca_nemestrina
FBgn0037550	CG9667	99	60.727	ENSMLEG00000033836	-	95	60.727	Mandrillus_leucophaeus
FBgn0037550	CG9667	99	60.886	ENSMAMG00000009501	isy1	95	61.455	Mastacembelus_armatus
FBgn0037550	CG9667	99	60.517	ENSMZEG00005012021	isy1	95	62.044	Maylandia_zebra
FBgn0037550	CG9667	99	62.593	ENSMGAG00000005181	-	95	62.545	Meleagris_gallopavo
FBgn0037550	CG9667	99	61.091	ENSMAUG00000008793	Isy1	95	61.091	Mesocricetus_auratus
FBgn0037550	CG9667	99	60.448	ENSMICG00000037547	-	95	59.774	Microcebus_murinus
FBgn0037550	CG9667	99	61.455	ENSMOCG00000000472	Isy1	95	61.455	Microtus_ochrogaster
FBgn0037550	CG9667	99	55.197	ENSMMOG00000017810	isy1	95	54.138	Mola_mola
FBgn0037550	CG9667	99	60.702	ENSMODG00000008387	-	95	63.603	Monodelphis_domestica
FBgn0037550	CG9667	99	61.818	ENSMALG00000020650	isy1	95	61.818	Monopterus_albus
FBgn0037550	CG9667	99	61.455	MGP_CAROLIEiJ_G0028619	Isy1	98	63.265	Mus_caroli
FBgn0037550	CG9667	99	61.455	ENSMUSG00000030056	Isy1	100	65.263	Mus_musculus
FBgn0037550	CG9667	99	51.799	MGP_PahariEiJ_G0022357	Isy1	100	56.291	Mus_pahari
FBgn0037550	CG9667	99	61.455	MGP_SPRETEiJ_G0029631	Isy1	98	63.265	Mus_spretus
FBgn0037550	CG9667	99	53.091	ENSMPUG00000017307	-	90	53.091	Mustela_putorius_furo
FBgn0037550	CG9667	99	56.569	ENSMLUG00000011804	-	95	56.569	Myotis_lucifugus
FBgn0037550	CG9667	99	61.455	ENSNGAG00000015207	Isy1	95	61.455	Nannospalax_galili
FBgn0037550	CG9667	64	72.941	ENSNBRG00000006974	isy1	75	70.391	Neolamprologus_brichardi
FBgn0037550	CG9667	99	60.727	ENSNLEG00000028747	ISY1	95	60.727	Nomascus_leucogenys
FBgn0037550	CG9667	62	64.706	ENSMEUG00000008434	-	56	64.615	Notamacropus_eugenii
FBgn0037550	CG9667	99	60.219	ENSOPRG00000005468	-	82	60.219	Ochotona_princeps
FBgn0037550	CG9667	99	48.897	ENSODEG00000002067	-	90	50.370	Octodon_degus
FBgn0037550	CG9667	92	58.065	ENSONIG00000000267	isy1	100	56.809	Oreochromis_niloticus
FBgn0037550	CG9667	98	60.078	ENSOANG00000013141	-	93	58.868	Ornithorhynchus_anatinus
FBgn0037550	CG9667	99	60.727	ENSOCUG00000003923	-	95	61.818	Oryctolagus_cuniculus
FBgn0037550	CG9667	99	58.363	ENSORLG00000013250	isy1	95	60.148	Oryzias_latipes
FBgn0037550	CG9667	99	58.719	ENSORLG00020020966	isy1	95	60.517	Oryzias_latipes_hni
FBgn0037550	CG9667	99	60.949	ENSORLG00015017316	isy1	95	60.148	Oryzias_latipes_hsok
FBgn0037550	CG9667	99	58.824	ENSOMEG00000023905	isy1	95	58.596	Oryzias_melastigma
FBgn0037550	CG9667	99	60.584	ENSOGAG00000005142	-	95	60.584	Otolemur_garnettii
FBgn0037550	CG9667	99	60.294	ENSOARG00000003231	-	89	58.423	Ovis_aries
FBgn0037550	CG9667	99	60.727	ENSPPAG00000042141	-	95	60.727	Pan_paniscus
FBgn0037550	CG9667	99	61.091	ENSPPRG00000003480	-	95	61.091	Panthera_pardus
FBgn0037550	CG9667	99	61.091	ENSPTIG00000017919	-	95	61.091	Panthera_tigris_altaica
FBgn0037550	CG9667	99	55.892	ENSPTRG00000015367	ISY1	95	55.892	Pan_troglodytes
FBgn0037550	CG9667	99	60.727	ENSPANG00000004750	-	95	61.905	Papio_anubis
FBgn0037550	CG9667	99	63.768	ENSPKIG00000024592	isy1	95	63.768	Paramormyrops_kingsleyae
FBgn0037550	CG9667	99	61.232	ENSPSIG00000009384	-	95	61.348	Pelodiscus_sinensis
FBgn0037550	CG9667	99	53.817	ENSPMGG00000016328	isy1	83	52.030	Periophthalmus_magnuspinnatus
FBgn0037550	CG9667	99	61.455	ENSPEMG00000005390	Isy1	95	61.455	Peromyscus_maniculatus_bairdii
FBgn0037550	CG9667	65	73.184	ENSPMAG00000005010	-	99	73.184	Petromyzon_marinus
FBgn0037550	CG9667	99	61.053	ENSPCIG00000000466	-	71	63.603	Phascolarctos_cinereus
FBgn0037550	CG9667	66	53.179	ENSPFOG00000010228	isy1	92	56.886	Poecilia_formosa
FBgn0037550	CG9667	99	56.089	ENSPREG00000015121	isy1	96	56.827	Poecilia_reticulata
FBgn0037550	CG9667	99	60.727	ENSPPYG00000013424	-	95	60.727	Pongo_abelii
FBgn0037550	CG9667	99	54.545	ENSPCAG00000009535	-	95	53.716	Procavia_capensis
FBgn0037550	CG9667	72	69.841	ENSPCOG00000025242	-	92	69.841	Propithecus_coquereli
FBgn0037550	CG9667	99	60.870	ENSPNAG00000000703	isy1	94	63.838	Pygocentrus_nattereri
FBgn0037550	CG9667	99	62.044	ENSRNOG00000010021	Isy1	95	61.957	Rattus_norvegicus
FBgn0037550	CG9667	99	49.091	ENSRBIG00000028747	ISY1	94	49.091	Rhinopithecus_bieti
FBgn0037550	CG9667	99	60.727	ENSRROG00000032314	ISY1	95	60.727	Rhinopithecus_roxellana
FBgn0037550	CG9667	99	60.727	ENSSBOG00000029301	-	95	60.727	Saimiri_boliviensis_boliviensis
FBgn0037550	CG9667	99	60.702	ENSSHAG00000017192	-	95	63.603	Sarcophilus_harrisii
FBgn0037550	CG9667	99	61.290	ENSSFOG00015001127	isy1	95	62.909	Scleropages_formosus
FBgn0037550	CG9667	99	59.206	ENSSMAG00000006601	isy1	95	60.662	Scophthalmus_maximus
FBgn0037550	CG9667	99	61.594	ENSSDUG00000018291	isy1	95	61.255	Seriola_dumerili
FBgn0037550	CG9667	99	61.594	ENSSLDG00000022252	isy1	95	61.255	Seriola_lalandi_dorsalis
FBgn0037550	CG9667	65	48.538	ENSSARG00000007648	-	62	48.538	Sorex_araneus
FBgn0037550	CG9667	99	61.905	ENSSPUG00000018050	-	94	64.207	Sphenodon_punctatus
FBgn0037550	CG9667	64	72.941	ENSSPAG00000021900	isy1	63	72.941	Stegastes_partitus
FBgn0037550	CG9667	99	61.679	ENSSSCG00000038900	-	95	62.044	Sus_scrofa
FBgn0037550	CG9667	73	70.854	ENSTGUG00000007076	-	85	71.212	Taeniopygia_guttata
FBgn0037550	CG9667	79	61.905	ENSTGUG00000003998	-	93	62.981	Taeniopygia_guttata
FBgn0037550	CG9667	69	71.658	ENSTRUG00000002546	isy1	95	74.860	Takifugu_rubripes
FBgn0037550	CG9667	99	61.172	ENSTNIG00000005224	isy1	94	60.507	Tetraodon_nigroviridis
FBgn0037550	CG9667	79	53.846	ENSTBEG00000006938	-	95	53.846	Tupaia_belangeri
FBgn0037550	CG9667	99	58.647	ENSTTRG00000015267	-	95	59.559	Tursiops_truncatus
FBgn0037550	CG9667	99	61.091	ENSVVUG00000018261	-	95	61.091	Vulpes_vulpes
FBgn0037550	CG9667	99	61.765	ENSXMAG00000012452	isy1	95	62.362	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000350	generation of catalytic spliceosome for second transesterification step	21873635.	IBA	Process
GO:0000384	first spliceosomal transesterification activity	21873635.	IBA	Function
GO:0000389	mRNA 3'-splice site recognition	21873635.	IBA	Process
GO:0000398	mRNA splicing, via spliceosome	18981222.	IC	Process
GO:0000974	Prp19 complex	21873635.	IBA	Component
GO:0000974	Prp19 complex	24755291.	IDA	Component
GO:0003723	RNA binding	-	ISS	Function
GO:0071011	precatalytic spliceosome	18981222.	HDA	Component
GO:0071013	catalytic step 2 spliceosome	18981222.	HDA	Component
GO:0071013	catalytic step 2 spliceosome	21873635.	IBA	Component
GO:0071014	post-mRNA release spliceosomal complex	21873635.	IBA	Component
GO:0071020	post-spliceosomal complex	21873635.	IBA	Component