EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0037566 (Gene tree)
Gene ID: 40980
Gene Symbol: mRpL1
Alias: -
Full Name: mitochondrial ribosomal protein L1
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 1331 bases
Position: chr3R:8301440-8302770
Accession: FBgn0037566
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0081322	Ribosomal_L1	PF00687.21	1.3e-17	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0081832	-	1220	-	FBpp0081322	354 (aa)	-	Q9VHT5

Gene Model

Click here to download FBgn0037566's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0037566's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0037566	mRpL1	83	31.650	WBGene00017997	mrpl-1	77	33.106	Caenorhabditis_elegans

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000470	maturation of LSU-rRNA	21873635.	IBA	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	11279069.	ISS	Function
GO:0003735	structural constituent of ribosome	17927810.	TAS	Function
GO:0005762	mitochondrial large ribosomal subunit	11279069.	ISS	Component
GO:0005762	mitochondrial large ribosomal subunit	17927810.	TAS	Component
GO:0006412	translation	11279069.	ISS	Process
GO:0022625	cytosolic large ribosomal subunit	21873635.	IBA	Component
GO:0032543	mitochondrial translation	17927810.	TAS	Process