EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Gene Ontology

Description

Ensembl ID: FBgn0037602 (Gene tree)
Gene ID: 41021
Gene Symbol: SLIRP2
Alias: -
Full Name: SRA stem-loop interacting RNA binding protein 2
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 410 bases
Position: chr3R:8651084-8651493
Accession: FBgn0037602
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0081367	RRM_1	PF00076.22	5.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0081878	-	410	-	FBpp0081367	91 (aa)	-	B3DNE9

Gene Model

Click here to download FBgn0037602's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0037602's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0037602	SLIRP2	87	45.570	FBgn0064117	SLIRP1	88	45.570
FBgn0037602	SLIRP2	99	34.524	FBgn0263396	sqd	54	34.524

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003729	mRNA binding	21873635.	IBA	Function
GO:0003729	mRNA binding	10908586.	ISS	Function
GO:0005515	protein binding	25428350.	IPI	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0006397	mRNA processing	21873635.	IBA	Process
GO:1990904	ribonucleoprotein complex	21873635.	IBA	Component