EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0037686 (Gene tree)
Gene ID: 41120
Gene Symbol: RpL34b
Alias: -
Full Name: Ribosomal protein L34b
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 990 bases
Position: chr3R:9400237-9401226
Accession: FBgn0037686
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0081527	Ribosomal_L34e	PF01199.18	2.9e-42	1	1
FBpp0081528	Ribosomal_L34e	PF01199.18	2.9e-42	1	1
FBpp0308318	Ribosomal_L34e	PF01199.18	2.9e-42	1	1
FBpp0308319	Ribosomal_L34e	PF01199.18	2.9e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0082050	-	771	-	FBpp0081528	168 (aa)	-	Q9VHE5
FBtr0082049	-	754	-	FBpp0081527	168 (aa)	-	Q9VHE5
FBtr0339177	-	622	-	FBpp0308319	168 (aa)	-	Q9VHE5
FBtr0339176	-	589	-	FBpp0308318	168 (aa)	-	Q9VHE5

Gene Model

Click here to download FBgn0037686's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0037686's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0037686	RpL34b	66	99.099	FBgn0039406	RpL34a	71	99.130

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0037686	RpL34b	65	54.545	WBGene00004448	rpl-34	100	54.545	Caenorhabditis_elegans
FBgn0037686	RpL34b	64	62.037	ENSCING00000000338	-	97	62.037	Ciona_intestinalis
FBgn0037686	RpL34b	64	62.963	ENSCSAVG00000009906	-	97	62.963	Ciona_savignyi
FBgn0037686	RpL34b	61	59.804	YER056C-A	RPL34A	92	58.559	Saccharomyces_cerevisiae
FBgn0037686	RpL34b	61	60.784	YIL052C	RPL34B	92	59.459	Saccharomyces_cerevisiae
FBgn0037686	RpL34b	64	59.091	ENSSLDG00000008715	-	94	59.091	Seriola_lalandi_dorsalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0002181	cytoplasmic translation	16889426.	IC	Process
GO:0002181	cytoplasmic translation	17927810.	TAS	Process
GO:0003735	structural constituent of ribosome	16889426.	HDA	Function
GO:0003735	structural constituent of ribosome	-	IEA	Function
GO:0003735	structural constituent of ribosome	17927810.	TAS	Function
GO:0006412	translation	-	IEA	Process
GO:0022625	cytosolic large ribosomal subunit	21873635.	IBA	Component
GO:0022625	cytosolic large ribosomal subunit	17927810.	TAS	Component
GO:0022626	cytosolic ribosome	16889426.	HDA	Component
GO:0042254	ribosome biogenesis	21873635.	IBA	Process