EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0037713 (Gene tree)
Gene ID: 41155
Gene Symbol: CG16790
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 1141 bases
Position: chr3R:9569074-9570214
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0081590	HVSL	PF09749.9	2.4e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0082112	-	1028	-	FBpp0081590	258 (aa)	-	Q9VHB3
FBtr0332807	-	1008	-	FBpp0305030	52 (aa)	-	A0A0B4KFH3

Gene Model

Click here to download FBgn0037713's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0037713's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0037713	CG16790	78	39.524	ENSG00000103005	USB1	95	39.524	Homo_sapiens
FBgn0037713	CG16790	81	39.437	ENSAPOG00000011942	usb1	75	41.395	Acanthochromis_polyacanthus
FBgn0037713	CG16790	79	39.252	ENSAMEG00000017205	USB1	77	39.252	Ailuropoda_melanoleuca
FBgn0037713	CG16790	79	38.679	ENSACIG00000012234	usb1	77	38.679	Amphilophus_citrinellus
FBgn0037713	CG16790	81	40.376	ENSAOCG00000014831	usb1	75	41.121	Amphiprion_ocellaris
FBgn0037713	CG16790	81	40.845	ENSAPEG00000000296	usb1	75	41.589	Amphiprion_percula
FBgn0037713	CG16790	92	38.589	ENSATEG00000009348	usb1	83	39.344	Anabas_testudineus
FBgn0037713	CG16790	78	38.049	ENSAPLG00000002756	USB1	99	37.768	Anas_platyrhynchos
FBgn0037713	CG16790	78	37.561	ENSACAG00000015481	USB1	89	37.561	Anolis_carolinensis
FBgn0037713	CG16790	91	37.959	ENSANAG00000035640	USB1	87	37.959	Aotus_nancymaae
FBgn0037713	CG16790	81	40.278	ENSACLG00000020586	usb1	75	40.278	Astatotilapia_calliptera
FBgn0037713	CG16790	89	38.075	ENSAMXG00000040146	usb1	76	38.075	Astyanax_mexicanus
FBgn0037713	CG16790	97	36.842	ENSBTAG00000015758	USB1	86	37.500	Bos_taurus
FBgn0037713	CG16790	78	40.000	ENSCJAG00000011733	USB1	77	40.000	Callithrix_jacchus
FBgn0037713	CG16790	79	39.906	ENSCAFG00000008556	USB1	55	39.906	Canis_familiaris
FBgn0037713	CG16790	97	37.313	ENSCAFG00020009263	USB1	78	39.906	Canis_lupus_dingo
FBgn0037713	CG16790	97	36.842	ENSCHIG00000024290	USB1	86	37.500	Capra_hircus
FBgn0037713	CG16790	78	40.476	ENSTSYG00000006997	USB1	77	40.476	Carlito_syrichta
FBgn0037713	CG16790	78	36.667	ENSCAPG00000009057	USB1	87	36.667	Cavia_aperea
FBgn0037713	CG16790	97	36.264	ENSCPOG00000014325	USB1	77	40.000	Cavia_porcellus
FBgn0037713	CG16790	78	39.524	ENSCCAG00000022132	USB1	77	39.524	Cebus_capucinus
FBgn0037713	CG16790	88	39.076	ENSCATG00000032174	USB1	86	39.076	Cercocebus_atys
FBgn0037713	CG16790	56	37.333	ENSCLAG00000007363	USB1	85	37.333	Chinchilla_lanigera
FBgn0037713	CG16790	78	40.476	ENSCSAG00000004783	USB1	77	40.476	Chlorocebus_sabaeus
FBgn0037713	CG16790	90	34.454	ENSCPBG00000026943	USB1	84	34.728	Chrysemys_picta_bellii
FBgn0037713	CG16790	78	40.000	ENSCANG00000037135	USB1	77	40.000	Colobus_angolensis_palliatus
FBgn0037713	CG16790	97	34.672	ENSCGRG00001011243	USB1	87	35.366	Cricetulus_griseus_chok1gshd
FBgn0037713	CG16790	97	34.672	ENSCGRG00000013252	USB1	87	35.366	Cricetulus_griseus_crigri
FBgn0037713	CG16790	100	34.982	ENSCSEG00000013881	usb1	84	37.917	Cynoglossus_semilaevis
FBgn0037713	CG16790	78	40.291	ENSCVAG00000009252	usb1	88	41.063	Cyprinodon_variegatus
FBgn0037713	CG16790	84	37.991	ENSDARG00000003841	usb1	83	37.500	Danio_rerio
FBgn0037713	CG16790	100	37.818	ENSDORG00000001888	Usb1	100	37.818	Dipodomys_ordii
FBgn0037713	CG16790	75	32.143	ENSETEG00000019682	USB1	53	37.241	Echinops_telfairi
FBgn0037713	CG16790	77	36.275	ENSEBUG00000005889	usb1	71	36.275	Eptatretus_burgeri
FBgn0037713	CG16790	97	37.313	ENSEASG00005005484	USB1	97	37.313	Equus_asinus_asinus
FBgn0037713	CG16790	97	36.940	ENSECAG00000019493	USB1	89	36.940	Equus_caballus
FBgn0037713	CG16790	64	33.143	ENSEEUG00000000154	USB1	65	33.143	Erinaceus_europaeus
FBgn0037713	CG16790	92	35.472	ENSELUG00000010974	usb1	97	35.926	Esox_lucius
FBgn0037713	CG16790	78	38.350	ENSFCAG00000002693	USB1	76	38.350	Felis_catus
FBgn0037713	CG16790	88	38.793	ENSFALG00000006876	USB1	98	37.546	Ficedula_albicollis
FBgn0037713	CG16790	97	35.507	ENSFDAG00000010052	USB1	76	39.524	Fukomys_damarensis
FBgn0037713	CG16790	65	43.114	ENSFHEG00000012334	usb1	69	44.828	Fundulus_heteroclitus
FBgn0037713	CG16790	81	40.845	ENSGMOG00000004228	usb1	95	42.130	Gadus_morhua
FBgn0037713	CG16790	78	35.610	ENSGALG00000035604	USB1	80	36.098	Gallus_gallus
FBgn0037713	CG16790	81	42.254	ENSGAFG00000021890	usb1	77	43.458	Gambusia_affinis
FBgn0037713	CG16790	83	39.407	ENSGACG00000003257	usb1	85	40.586	Gasterosteus_aculeatus
FBgn0037713	CG16790	98	34.483	ENSGAGG00000022572	USB1	85	36.515	Gopherus_agassizii
FBgn0037713	CG16790	78	40.000	ENSGGOG00000017147	USB1	77	40.000	Gorilla_gorilla
FBgn0037713	CG16790	81	40.278	ENSHBUG00000009823	usb1	75	40.278	Haplochromis_burtoni
FBgn0037713	CG16790	78	39.048	ENSHGLG00000016078	USB1	75	39.048	Heterocephalus_glaber_female
FBgn0037713	CG16790	78	39.048	ENSHGLG00100005562	USB1	75	39.048	Heterocephalus_glaber_male
FBgn0037713	CG16790	79	38.164	ENSHCOG00000015633	usb1	94	35.019	Hippocampus_comes
FBgn0037713	CG16790	79	39.623	ENSIPUG00000008601	usb1	72	39.623	Ictalurus_punctatus
FBgn0037713	CG16790	78	41.429	ENSSTOG00000007548	USB1	75	42.381	Ictidomys_tridecemlineatus
FBgn0037713	CG16790	97	36.029	ENSJJAG00000021859	Usb1	84	37.131	Jaculus_jaculus
FBgn0037713	CG16790	78	41.463	ENSKMAG00000007200	usb1	72	42.788	Kryptolebias_marmoratus
FBgn0037713	CG16790	88	37.083	ENSLBEG00000008452	usb1	66	40.887	Labrus_bergylta
FBgn0037713	CG16790	66	40.909	ENSLACG00000000105	USB1	61	40.331	Latimeria_chalumnae
FBgn0037713	CG16790	79	39.713	ENSLOCG00000000465	usb1	74	39.713	Lepisosteus_oculatus
FBgn0037713	CG16790	97	33.582	ENSLAFG00000002267	USB1	75	36.232	Loxodonta_africana
FBgn0037713	CG16790	78	40.000	ENSMFAG00000003926	USB1	77	40.000	Macaca_fascicularis
FBgn0037713	CG16790	78	40.000	ENSMMUG00000022669	USB1	77	40.000	Macaca_mulatta
FBgn0037713	CG16790	78	40.476	ENSMNEG00000042487	USB1	77	40.476	Macaca_nemestrina
FBgn0037713	CG16790	78	40.000	ENSMLEG00000028756	USB1	77	40.000	Mandrillus_leucophaeus
FBgn0037713	CG16790	80	39.906	ENSMAMG00000015092	usb1	76	40.187	Mastacembelus_armatus
FBgn0037713	CG16790	81	40.278	ENSMZEG00005010008	usb1	75	40.278	Maylandia_zebra
FBgn0037713	CG16790	97	35.316	ENSMAUG00000007832	Usb1	76	39.806	Mesocricetus_auratus
FBgn0037713	CG16790	78	39.524	ENSMICG00000004900	USB1	77	39.524	Microcebus_murinus
FBgn0037713	CG16790	97	35.531	ENSMOCG00000022647	Usb1	76	39.806	Microtus_ochrogaster
FBgn0037713	CG16790	93	39.200	ENSMMOG00000000490	usb1	95	39.216	Mola_mola
FBgn0037713	CG16790	79	41.509	ENSMODG00000014067	USB1	78	41.509	Monodelphis_domestica
FBgn0037713	CG16790	92	37.652	ENSMALG00000005930	usb1	83	37.652	Monopterus_albus
FBgn0037713	CG16790	78	39.904	MGP_CAROLIEiJ_G0031421	Usb1	91	42.453	Mus_caroli
FBgn0037713	CG16790	78	39.423	ENSMUSG00000031792	Usb1	91	41.509	Mus_musculus
FBgn0037713	CG16790	78	40.097	MGP_PahariEiJ_G0023019	Usb1	91	44.037	Mus_pahari
FBgn0037713	CG16790	78	39.130	MGP_SPRETEiJ_G0032540	Usb1	76	38.942	Mus_spretus
FBgn0037713	CG16790	78	38.095	ENSMPUG00000004684	USB1	73	38.537	Mustela_putorius_furo
FBgn0037713	CG16790	78	41.429	ENSMLUG00000007400	USB1	88	41.429	Myotis_lucifugus
FBgn0037713	CG16790	97	36.015	ENSNGAG00000009703	Usb1	76	40.476	Nannospalax_galili
FBgn0037713	CG16790	89	33.475	ENSNBRG00000008747	usb1	99	38.889	Neolamprologus_brichardi
FBgn0037713	CG16790	67	41.667	ENSNLEG00000003340	USB1	70	41.667	Nomascus_leucogenys
FBgn0037713	CG16790	97	38.889	ENSODEG00000016214	USB1	77	41.429	Octodon_degus
FBgn0037713	CG16790	81	39.352	ENSONIG00000011063	usb1	76	39.352	Oreochromis_niloticus
FBgn0037713	CG16790	83	37.826	ENSOANG00000012118	USB1	95	37.826	Ornithorhynchus_anatinus
FBgn0037713	CG16790	78	40.000	ENSORLG00000012479	usb1	75	41.262	Oryzias_latipes
FBgn0037713	CG16790	78	39.512	ENSORLG00020018671	usb1	75	40.291	Oryzias_latipes_hni
FBgn0037713	CG16790	78	40.000	ENSORLG00015009679	usb1	76	41.262	Oryzias_latipes_hsok
FBgn0037713	CG16790	89	38.462	ENSOMEG00000012930	usb1	99	37.143	Oryzias_melastigma
FBgn0037713	CG16790	78	38.095	ENSOGAG00000003273	USB1	75	38.095	Otolemur_garnettii
FBgn0037713	CG16790	79	39.623	ENSOARG00000001107	USB1	88	37.607	Ovis_aries
FBgn0037713	CG16790	78	39.524	ENSPPAG00000042137	USB1	77	39.524	Pan_paniscus
FBgn0037713	CG16790	78	38.350	ENSPPRG00000024797	USB1	76	38.350	Panthera_pardus
FBgn0037713	CG16790	78	37.864	ENSPTIG00000007506	USB1	76	37.864	Panthera_tigris_altaica
FBgn0037713	CG16790	78	40.000	ENSPTRG00000008172	USB1	95	40.000	Pan_troglodytes
FBgn0037713	CG16790	78	40.000	ENSPANG00000025138	USB1	77	40.000	Papio_anubis
FBgn0037713	CG16790	96	37.549	ENSPKIG00000015109	usb1	80	37.500	Paramormyrops_kingsleyae
FBgn0037713	CG16790	87	39.224	ENSPMGG00000017725	usb1	84	39.224	Periophthalmus_magnuspinnatus
FBgn0037713	CG16790	97	36.015	ENSPEMG00000016183	Usb1	75	40.000	Peromyscus_maniculatus_bairdii
FBgn0037713	CG16790	78	38.049	ENSPMAG00000000462	usb1	83	38.049	Petromyzon_marinus
FBgn0037713	CG16790	79	42.308	ENSPFOG00000011130	usb1	74	44.019	Poecilia_formosa
FBgn0037713	CG16790	81	43.925	ENSPLAG00000009820	usb1	76	43.925	Poecilia_latipinna
FBgn0037713	CG16790	79	42.308	ENSPMEG00000006402	usb1	74	44.019	Poecilia_mexicana
FBgn0037713	CG16790	65	45.562	ENSPREG00000001047	usb1	73	44.505	Poecilia_reticulata
FBgn0037713	CG16790	67	39.227	ENSPPYG00000007401	USB1	69	39.227	Pongo_abelii
FBgn0037713	CG16790	79	39.252	ENSPCOG00000022612	USB1	78	39.252	Propithecus_coquereli
FBgn0037713	CG16790	97	37.308	ENSPVAG00000004613	USB1	87	36.957	Pteropus_vampyrus
FBgn0037713	CG16790	81	40.278	ENSPNYG00000022262	usb1	75	40.278	Pundamilia_nyererei
FBgn0037713	CG16790	87	40.260	ENSPNAG00000011736	usb1	77	40.260	Pygocentrus_nattereri
FBgn0037713	CG16790	97	35.379	ENSRNOG00000013216	Usb1	76	40.000	Rattus_norvegicus
FBgn0037713	CG16790	78	40.000	ENSRBIG00000044466	USB1	95	40.000	Rhinopithecus_bieti
FBgn0037713	CG16790	78	40.000	ENSRROG00000029211	USB1	77	40.000	Rhinopithecus_roxellana
FBgn0037713	CG16790	78	40.000	ENSSBOG00000029362	USB1	77	40.000	Saimiri_boliviensis_boliviensis
FBgn0037713	CG16790	82	37.900	ENSSHAG00000006993	USB1	89	37.339	Sarcophilus_harrisii
FBgn0037713	CG16790	90	37.238	ENSSFOG00015023663	usb1	72	37.238	Scleropages_formosus
FBgn0037713	CG16790	97	33.455	ENSSMAG00000015834	usb1	74	38.914	Scophthalmus_maximus
FBgn0037713	CG16790	97	36.220	ENSSDUG00000002949	usb1	78	39.720	Seriola_dumerili
FBgn0037713	CG16790	81	38.967	ENSSLDG00000014174	usb1	75	40.278	Seriola_lalandi_dorsalis
FBgn0037713	CG16790	79	39.234	ENSSPUG00000006741	USB1	97	39.234	Sphenodon_punctatus
FBgn0037713	CG16790	81	38.967	ENSSPAG00000007484	usb1	74	39.815	Stegastes_partitus
FBgn0037713	CG16790	79	39.720	ENSSSCG00000002807	USB1	78	39.720	Sus_scrofa
FBgn0037713	CG16790	83	38.636	ENSTGUG00000004792	USB1	98	37.643	Taeniopygia_guttata
FBgn0037713	CG16790	95	35.178	ENSTRUG00000021069	usb1	90	35.060	Takifugu_rubripes
FBgn0037713	CG16790	97	35.606	ENSTNIG00000000626	usb1	90	35.484	Tetraodon_nigroviridis
FBgn0037713	CG16790	78	32.683	ENSTBEG00000001507	USB1	88	32.683	Tupaia_belangeri
FBgn0037713	CG16790	79	39.720	ENSUAMG00000016823	USB1	77	39.720	Ursus_americanus
FBgn0037713	CG16790	78	40.000	ENSUMAG00000021369	USB1	95	40.000	Ursus_maritimus
FBgn0037713	CG16790	97	35.955	ENSVVUG00000023700	USB1	93	37.500	Vulpes_vulpes
FBgn0037713	CG16790	78	38.350	ENSXETG00000013795	usb1	99	35.361	Xenopus_tropicalis
FBgn0037713	CG16790	81	42.254	ENSXMAG00000024687	usb1	63	43.458	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000175	3'-5'-exoribonuclease activity	21873635.	IBA	Function
GO:0005515	protein binding	12845326.	IPI	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0034477	U6 snRNA 3'-end processing	21873635.	IBA	Process