EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0037877 (Gene tree)
Gene ID: 41345
Gene Symbol: CG6689
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 2167 bases
Position: chr3R:11217898-11220064
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0081844	zf-C2H2	PF00096.26	5.4e-19	1	4
FBpp0081844	zf-C2H2	PF00096.26	5.4e-19	2	4
FBpp0081844	zf-C2H2	PF00096.26	5.4e-19	3	4
FBpp0081844	zf-C2H2	PF00096.26	5.4e-19	4	4
FBpp0081844	zf-met	PF12874.7	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0082368	-	1909	-	FBpp0081844	613 (aa)	-	Q7YTZ5

Gene Model

Click here to download FBgn0037877's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0037877's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0037877	CG6689	73	36.937	FBgn0038765	CG4424	95	36.842
FBgn0037877	CG6689	72	36.000	FBgn0037619	CG8159	85	36.000
FBgn0037877	CG6689	70	30.702	FBgn0038548	CG17806	94	30.702

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0037877	CG6689	55	33.491	ENSDARG00000078159	zgc:175284	93	33.491	Danio_rerio
FBgn0037877	CG6689	60	34.862	ENSHBUG00000009953	-	83	34.862	Haplochromis_burtoni
FBgn0037877	CG6689	50	40.000	ENSMZEG00005025568	-	79	40.000	Maylandia_zebra
FBgn0037877	CG6689	52	32.927	ENSMZEG00005027943	-	92	30.594	Maylandia_zebra
FBgn0037877	CG6689	66	30.734	ENSPKIG00000019848	-	74	30.734	Paramormyrops_kingsleyae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000978	RNA polymerase II proximal promoter sequence-specific DNA binding	-	ISS	Function
GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	-	ISS	Function
GO:0003677	DNA binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISS	Component
GO:0006357	regulation of transcription by RNA polymerase II	-	ISS	Process
GO:0008270	zinc ion binding	-	IEA	Function