EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0037892 (Gene tree)
Gene ID: 41364
Gene Symbol: mRpL40
Alias: -
Full Name: mitochondrial ribosomal protein L40
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 839 bases
Position: chr3R:11407918-11408756
Accession: FBgn0037892
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0081860	MRP-L28	PF09812.9	4.3e-62	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0082384	-	716	-	FBpp0081860	196 (aa)	-	Q9VGP7

Gene Model

Click here to download FBgn0037892's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0037892's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0037892	mRpL40	66	40.000	ENSG00000185608	MRPL40	72	39.610	Homo_sapiens
FBgn0037892	mRpL40	82	42.857	ENSAPOG00000021291	mrpl40	76	42.857	Acanthochromis_polyacanthus
FBgn0037892	mRpL40	79	40.260	ENSAMEG00000011421	MRPL40	72	40.260	Ailuropoda_melanoleuca
FBgn0037892	mRpL40	94	40.104	ENSACIG00000006672	mrpl40	92	39.583	Amphilophus_citrinellus
FBgn0037892	mRpL40	59	35.345	ENSACIG00000006717	MRPL40	67	35.766	Amphilophus_citrinellus
FBgn0037892	mRpL40	82	40.994	ENSAOCG00000003216	mrpl40	76	40.373	Amphiprion_ocellaris
FBgn0037892	mRpL40	82	40.994	ENSAPEG00000017401	mrpl40	76	40.373	Amphiprion_percula
FBgn0037892	mRpL40	78	40.789	ENSATEG00000020753	mrpl40	79	38.235	Anabas_testudineus
FBgn0037892	mRpL40	68	45.865	ENSAPLG00000004002	MRPL40	66	45.522	Anas_platyrhynchos
FBgn0037892	mRpL40	58	41.593	ENSACAG00000001053	MRPL40	66	40.299	Anolis_carolinensis
FBgn0037892	mRpL40	66	38.462	ENSANAG00000026579	MRPL40	72	38.961	Aotus_nancymaae
FBgn0037892	mRpL40	82	40.625	ENSACLG00000011106	mrpl40	75	40.000	Astatotilapia_calliptera
FBgn0037892	mRpL40	82	39.752	ENSAMXG00000029691	mrpl40	76	40.244	Astyanax_mexicanus
FBgn0037892	mRpL40	66	37.692	ENSBTAG00000019891	MRPL40	71	38.816	Bos_taurus
FBgn0037892	mRpL40	87	37.427	WBGene00018793	mrpl-40	97	36.788	Caenorhabditis_elegans
FBgn0037892	mRpL40	66	37.692	ENSCJAG00000001584	MRPL40	92	34.010	Callithrix_jacchus
FBgn0037892	mRpL40	95	38.071	ENSCAFG00020007995	MRPL40	92	37.563	Canis_lupus_dingo
FBgn0037892	mRpL40	90	39.106	ENSCHIG00000000131	-	90	39.362	Capra_hircus
FBgn0037892	mRpL40	67	37.121	ENSCHIG00000026872	-	74	37.121	Capra_hircus
FBgn0037892	mRpL40	85	40.964	ENSTSYG00000014747	MRPL40	79	39.759	Carlito_syrichta
FBgn0037892	mRpL40	65	42.969	ENSCAPG00000012876	MRPL40	88	42.969	Cavia_aperea
FBgn0037892	mRpL40	66	42.308	ENSCPOG00000026802	MRPL40	72	42.857	Cavia_porcellus
FBgn0037892	mRpL40	66	39.231	ENSCCAG00000037694	MRPL40	74	39.610	Cebus_capucinus
FBgn0037892	mRpL40	66	40.769	ENSCATG00000031418	-	71	40.789	Cercocebus_atys
FBgn0037892	mRpL40	66	40.769	ENSCATG00000043592	-	90	36.508	Cercocebus_atys
FBgn0037892	mRpL40	79	43.506	ENSCLAG00000016629	MRPL40	71	43.421	Chinchilla_lanigera
FBgn0037892	mRpL40	66	40.769	ENSCSAG00000011593	MRPL40	71	40.789	Chlorocebus_sabaeus
FBgn0037892	mRpL40	65	39.062	ENSCHOG00000008751	MRPL40	81	40.000	Choloepus_hoffmanni
FBgn0037892	mRpL40	77	43.333	ENSCPBG00000010618	MRPL40	69	41.791	Chrysemys_picta_bellii
FBgn0037892	mRpL40	68	37.226	ENSCSAVG00000001505	-	67	37.226	Ciona_savignyi
FBgn0037892	mRpL40	66	41.538	ENSCANG00000038600	MRPL40	78	41.447	Colobus_angolensis_palliatus
FBgn0037892	mRpL40	78	42.105	ENSCGRG00001019957	Mrpl40	71	42.105	Cricetulus_griseus_chok1gshd
FBgn0037892	mRpL40	78	42.105	ENSCGRG00000001245	Mrpl40	71	42.105	Cricetulus_griseus_crigri
FBgn0037892	mRpL40	82	41.875	ENSCSEG00000019750	mrpl40	75	41.875	Cynoglossus_semilaevis
FBgn0037892	mRpL40	68	33.083	ENSCSEG00000012296	-	66	35.659	Cynoglossus_semilaevis
FBgn0037892	mRpL40	87	41.040	ENSCVAG00000018229	mrpl40	82	40.462	Cyprinodon_variegatus
FBgn0037892	mRpL40	82	39.375	ENSDARG00000043554	mrpl40	77	39.375	Danio_rerio
FBgn0037892	mRpL40	64	38.400	ENSDNOG00000038360	-	72	35.099	Dasypus_novemcinctus
FBgn0037892	mRpL40	66	40.769	ENSDORG00000002949	Mrpl40	71	41.447	Dipodomys_ordii
FBgn0037892	mRpL40	66	39.231	ENSEASG00005010493	MRPL40	72	40.909	Equus_asinus_asinus
FBgn0037892	mRpL40	66	39.231	ENSECAG00000009876	MRPL40	87	41.447	Equus_caballus
FBgn0037892	mRpL40	90	37.853	ENSEEUG00000009268	MRPL40	82	37.853	Erinaceus_europaeus
FBgn0037892	mRpL40	94	37.629	ENSELUG00000009281	mrpl40	92	37.113	Esox_lucius
FBgn0037892	mRpL40	79	41.558	ENSFCAG00000002752	MRPL40	72	40.909	Felis_catus
FBgn0037892	mRpL40	58	40.351	ENSFALG00000007981	MRPL40	67	38.806	Ficedula_albicollis
FBgn0037892	mRpL40	79	42.208	ENSFDAG00000020940	MRPL40	91	42.208	Fukomys_damarensis
FBgn0037892	mRpL40	82	41.250	ENSGAFG00000000522	mrpl40	66	38.971	Gambusia_affinis
FBgn0037892	mRpL40	77	43.333	ENSGAGG00000020728	MRPL40	64	41.791	Gopherus_agassizii
FBgn0037892	mRpL40	66	39.231	ENSGGOG00000012336	MRPL40	72	38.961	Gorilla_gorilla
FBgn0037892	mRpL40	82	40.625	ENSHBUG00000000404	mrpl40	76	40.000	Haplochromis_burtoni
FBgn0037892	mRpL40	79	42.208	ENSHGLG00000018525	MRPL40	91	42.208	Heterocephalus_glaber_female
FBgn0037892	mRpL40	90	38.503	ENSHGLG00100009563	MRPL40	88	38.503	Heterocephalus_glaber_male
FBgn0037892	mRpL40	82	41.615	ENSHCOG00000005731	mrpl40	76	40.994	Hippocampus_comes
FBgn0037892	mRpL40	94	36.757	ENSIPUG00000020288	Mrpl40	61	38.462	Ictalurus_punctatus
FBgn0037892	mRpL40	78	40.789	ENSSTOG00000002887	MRPL40	72	40.789	Ictidomys_tridecemlineatus
FBgn0037892	mRpL40	78	44.079	ENSJJAG00000017905	Mrpl40	85	39.011	Jaculus_jaculus
FBgn0037892	mRpL40	95	40.212	ENSKMAG00000003717	mrpl40	90	40.212	Kryptolebias_marmoratus
FBgn0037892	mRpL40	78	41.447	ENSLBEG00000025203	mrpl40	69	39.231	Labrus_bergylta
FBgn0037892	mRpL40	80	40.127	ENSLACG00000015070	MRPL40	66	38.971	Latimeria_chalumnae
FBgn0037892	mRpL40	58	43.478	ENSLOCG00000001879	mrpl40	76	41.358	Lepisosteus_oculatus
FBgn0037892	mRpL40	79	41.558	ENSLAFG00000011061	MRPL40	72	41.558	Loxodonta_africana
FBgn0037892	mRpL40	66	38.462	ENSMFAG00000001495	-	92	34.197	Macaca_fascicularis
FBgn0037892	mRpL40	66	40.769	ENSMFAG00000032018	-	71	40.789	Macaca_fascicularis
FBgn0037892	mRpL40	66	39.231	ENSMFAG00000039890	-	78	39.474	Macaca_fascicularis
FBgn0037892	mRpL40	66	37.692	ENSMMUG00000006218	-	81	38.158	Macaca_mulatta
FBgn0037892	mRpL40	66	38.462	ENSMMUG00000030886	-	71	38.816	Macaca_mulatta
FBgn0037892	mRpL40	66	40.769	ENSMNEG00000034050	-	71	40.789	Macaca_nemestrina
FBgn0037892	mRpL40	66	40.000	ENSMNEG00000040492	-	70	40.000	Macaca_nemestrina
FBgn0037892	mRpL40	66	40.000	ENSMNEG00000041171	-	73	40.132	Macaca_nemestrina
FBgn0037892	mRpL40	66	38.462	ENSMLEG00000009022	-	78	38.816	Mandrillus_leucophaeus
FBgn0037892	mRpL40	66	40.769	ENSMLEG00000030926	-	78	40.789	Mandrillus_leucophaeus
FBgn0037892	mRpL40	91	35.979	ENSMLEG00000032552	-	90	35.979	Mandrillus_leucophaeus
FBgn0037892	mRpL40	82	41.875	ENSMAMG00000014249	mrpl40	75	41.250	Mastacembelus_armatus
FBgn0037892	mRpL40	82	40.625	ENSMZEG00005009853	mrpl40	75	40.000	Maylandia_zebra
FBgn0037892	mRpL40	68	42.537	ENSMGAG00000001177	MRPL40	85	42.537	Meleagris_gallopavo
FBgn0037892	mRpL40	78	43.421	ENSMAUG00000015350	Mrpl40	71	43.421	Mesocricetus_auratus
FBgn0037892	mRpL40	66	39.231	ENSMICG00000046066	MRPL40	72	39.610	Microcebus_murinus
FBgn0037892	mRpL40	78	41.447	ENSMOCG00000016970	Mrpl40	71	41.447	Microtus_ochrogaster
FBgn0037892	mRpL40	83	38.202	ENSMMOG00000012861	mrpl40	73	39.706	Mola_mola
FBgn0037892	mRpL40	78	39.474	ENSMODG00000010070	MRPL40	80	41.447	Monodelphis_domestica
FBgn0037892	mRpL40	85	39.759	ENSMALG00000020778	mrpl40	83	39.157	Monopterus_albus
FBgn0037892	mRpL40	78	41.447	MGP_CAROLIEiJ_G0020557	Mrpl40	91	40.260	Mus_caroli
FBgn0037892	mRpL40	78	41.447	ENSMUSG00000022706	Mrpl40	91	40.260	Mus_musculus
FBgn0037892	mRpL40	79	40.909	MGP_PahariEiJ_G0016262	Mrpl40	91	40.909	Mus_pahari
FBgn0037892	mRpL40	78	41.447	MGP_SPRETEiJ_G0021452	Mrpl40	91	40.260	Mus_spretus
FBgn0037892	mRpL40	66	38.462	ENSMPUG00000003865	MRPL40	72	40.260	Mustela_putorius_furo
FBgn0037892	mRpL40	78	42.105	ENSMLUG00000024620	-	71	42.105	Myotis_lucifugus
FBgn0037892	mRpL40	78	42.105	ENSMLUG00000002456	-	71	42.105	Myotis_lucifugus
FBgn0037892	mRpL40	79	42.208	ENSNGAG00000000304	Mrpl40	73	42.208	Nannospalax_galili
FBgn0037892	mRpL40	66	39.231	ENSNLEG00000005372	MRPL40	88	34.921	Nomascus_leucogenys
FBgn0037892	mRpL40	90	39.572	ENSODEG00000017051	MRPL40	88	39.037	Octodon_degus
FBgn0037892	mRpL40	82	40.625	ENSONIG00000014393	mrpl40	75	40.000	Oreochromis_niloticus
FBgn0037892	mRpL40	66	43.077	ENSOCUG00000009859	MRPL40	53	43.421	Oryctolagus_cuniculus
FBgn0037892	mRpL40	87	40.113	ENSORLG00000002574	mrpl40	93	39.548	Oryzias_latipes
FBgn0037892	mRpL40	82	42.500	ENSORLG00020005727	mrpl40	75	42.857	Oryzias_latipes_hni
FBgn0037892	mRpL40	82	41.875	ENSORLG00015015422	mrpl40	75	42.236	Oryzias_latipes_hsok
FBgn0037892	mRpL40	82	42.500	ENSOMEG00000017632	mrpl40	75	41.875	Oryzias_melastigma
FBgn0037892	mRpL40	66	39.231	ENSOGAG00000030071	MRPL40	79	40.260	Otolemur_garnettii
FBgn0037892	mRpL40	66	36.923	ENSOARG00000017561	MRPL40	70	39.355	Ovis_aries
FBgn0037892	mRpL40	66	40.000	ENSPPAG00000030349	MRPL40	72	39.610	Pan_paniscus
FBgn0037892	mRpL40	79	41.558	ENSPPRG00000004672	MRPL40	72	40.909	Panthera_pardus
FBgn0037892	mRpL40	66	40.000	ENSPTIG00000003393	MRPL40	72	40.909	Panthera_tigris_altaica
FBgn0037892	mRpL40	66	40.000	ENSPTRG00000014061	MRPL40	72	39.610	Pan_troglodytes
FBgn0037892	mRpL40	66	40.769	ENSPANG00000000595	-	90	36.508	Papio_anubis
FBgn0037892	mRpL40	66	40.769	ENSPANG00000007370	-	71	40.789	Papio_anubis
FBgn0037892	mRpL40	81	43.671	ENSPKIG00000024494	mrpl40	74	43.671	Paramormyrops_kingsleyae
FBgn0037892	mRpL40	58	42.105	ENSPSIG00000003055	MRPL40	81	42.857	Pelodiscus_sinensis
FBgn0037892	mRpL40	58	38.596	ENSPMGG00000018388	mrpl40	72	36.765	Periophthalmus_magnuspinnatus
FBgn0037892	mRpL40	78	43.421	ENSPEMG00000017933	Mrpl40	71	43.421	Peromyscus_maniculatus_bairdii
FBgn0037892	mRpL40	83	39.264	ENSPCIG00000025479	MRPL40	77	39.264	Phascolarctos_cinereus
FBgn0037892	mRpL40	82	41.358	ENSPFOG00000012506	mrpl40	74	40.741	Poecilia_formosa
FBgn0037892	mRpL40	82	41.875	ENSPLAG00000017335	mrpl40	75	41.250	Poecilia_latipinna
FBgn0037892	mRpL40	82	41.615	ENSPMEG00000003881	mrpl40	76	40.994	Poecilia_mexicana
FBgn0037892	mRpL40	82	41.250	ENSPREG00000011448	mrpl40	75	40.625	Poecilia_reticulata
FBgn0037892	mRpL40	66	40.769	ENSPPYG00000011578	MRPL40	79	40.260	Pongo_abelii
FBgn0037892	mRpL40	63	40.650	ENSPCAG00000007834	MRPL40	59	40.650	Procavia_capensis
FBgn0037892	mRpL40	66	40.000	ENSPCOG00000014413	MRPL40	72	40.260	Propithecus_coquereli
FBgn0037892	mRpL40	82	40.625	ENSPNYG00000008216	mrpl40	75	40.000	Pundamilia_nyererei
FBgn0037892	mRpL40	94	38.071	ENSPNAG00000000310	mrpl40	95	37.563	Pygocentrus_nattereri
FBgn0037892	mRpL40	78	40.132	ENSRNOG00000049686	Mrpl40	71	40.132	Rattus_norvegicus
FBgn0037892	mRpL40	66	41.538	ENSRBIG00000023060	MRPL40	88	37.234	Rhinopithecus_bieti
FBgn0037892	mRpL40	69	40.000	ENSRROG00000043837	MRPL40	91	36.269	Rhinopithecus_roxellana
FBgn0037892	mRpL40	66	38.462	ENSSBOG00000031050	MRPL40	72	38.961	Saimiri_boliviensis_boliviensis
FBgn0037892	mRpL40	78	40.132	ENSSHAG00000010239	MRPL40	91	40.132	Sarcophilus_harrisii
FBgn0037892	mRpL40	82	43.478	ENSSFOG00015014220	mrpl40	79	43.478	Scleropages_formosus
FBgn0037892	mRpL40	82	40.000	ENSSMAG00000006340	mrpl40	75	39.375	Scophthalmus_maximus
FBgn0037892	mRpL40	82	41.250	ENSSDUG00000022994	mrpl40	75	40.625	Seriola_dumerili
FBgn0037892	mRpL40	82	41.250	ENSSLDG00000009671	mrpl40	75	40.625	Seriola_lalandi_dorsalis
FBgn0037892	mRpL40	94	40.000	ENSSARG00000003051	MRPL40	92	40.000	Sorex_araneus
FBgn0037892	mRpL40	68	42.857	ENSSPUG00000015559	MRPL40	72	46.000	Sphenodon_punctatus
FBgn0037892	mRpL40	82	41.875	ENSSPAG00000015481	mrpl40	75	41.250	Stegastes_partitus
FBgn0037892	mRpL40	66	40.769	ENSSSCG00000034014	MRPL40	72	41.558	Sus_scrofa
FBgn0037892	mRpL40	58	40.351	ENSTGUG00000008534	MRPL40	86	38.806	Taeniopygia_guttata
FBgn0037892	mRpL40	82	41.615	ENSTRUG00000025904	mrpl40	77	40.994	Takifugu_rubripes
FBgn0037892	mRpL40	66	39.231	ENSTTRG00000014932	MRPL40	72	40.132	Tursiops_truncatus
FBgn0037892	mRpL40	79	40.260	ENSUAMG00000007667	MRPL40	72	40.260	Ursus_americanus
FBgn0037892	mRpL40	77	39.735	ENSUMAG00000006804	MRPL40	76	39.735	Ursus_maritimus
FBgn0037892	mRpL40	66	33.077	ENSVVUG00000020719	-	58	33.077	Vulpes_vulpes
FBgn0037892	mRpL40	95	38.071	ENSVVUG00000025360	-	92	37.563	Vulpes_vulpes
FBgn0037892	mRpL40	82	42.500	ENSXETG00000018600	mrpl40	67	41.912	Xenopus_tropicalis
FBgn0037892	mRpL40	82	41.250	ENSXCOG00000002135	mrpl40	75	40.625	Xiphophorus_couchianus
FBgn0037892	mRpL40	82	41.250	ENSXMAG00000014595	mrpl40	75	40.625	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	11279069.	ISS	Function
GO:0003735	structural constituent of ribosome	17927810.	TAS	Function
GO:0005761	mitochondrial ribosome	21873635.	IBA	Component
GO:0005762	mitochondrial large ribosomal subunit	11279069.	ISS	Component
GO:0005762	mitochondrial large ribosomal subunit	17927810.	TAS	Component
GO:0006412	translation	11279069.	ISS	Process
GO:0032543	mitochondrial translation	17927810.	TAS	Process