EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0037912 (Gene tree)
Gene ID: 3772221
Gene Symbol: sea
Alias: -
Full Name: scheggia
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 7159
Position: chr3R: 11559896-11567054
Accession: FBgn0037912
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0100464	-	1660	-	FBpp0099890	317 (aa)	-	Q7KSQ0
FBtr0100465	-	1444	-	FBpp0099892	317 (aa)	-	Q7KSQ0
FBtr0100461	-	1318	-	FBpp0099888	317 (aa)	-	Q7KSQ0
FBtr0100462	-	1347	-	FBpp0099889	317 (aa)	-	Q7KSQ0

Gene Model

Click here to download FBgn0037912's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0037912's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0037912	sea	85	69.004	WBGene00010780	K11H3.3	91	69.258	Caenorhabditis_elegans

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005739	mitochondrion	19654186.	IDA	Component
GO:0006843	mitochondrial citrate transmembrane transport	21873635.	IBA	Process
GO:0006843	mitochondrial citrate transmembrane transport	19654186.	IMP	Process
GO:0015746	citrate transport	18515854.	IDA	Process
GO:0016006	Nebenkern	19654186.	IDA	Component
GO:0022857	transmembrane transporter activity	-	IEA	Function