EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Gene Ontology

Description

Ensembl ID: FBgn0037923 (Gene tree)
Gene ID: 41396
Gene Symbol: CG6813
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 1588 bases
Position: chr3R:11625051-11626638
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0289808	zf-C2H2	PF00096.26	2.5e-17	1	4
FBpp0289808	zf-C2H2	PF00096.26	2.5e-17	2	4
FBpp0289808	zf-C2H2	PF00096.26	2.5e-17	3	4
FBpp0289808	zf-C2H2	PF00096.26	2.5e-17	4	4
FBpp0289807	zf-C2H2	PF00096.26	1.8e-15	1	4
FBpp0289807	zf-C2H2	PF00096.26	1.8e-15	2	4
FBpp0289807	zf-C2H2	PF00096.26	1.8e-15	3	4
FBpp0289807	zf-C2H2	PF00096.26	1.8e-15	4	4
FBpp0311369	zf-C2H2	PF00096.26	1.8e-15	1	4
FBpp0311369	zf-C2H2	PF00096.26	1.8e-15	2	4
FBpp0311369	zf-C2H2	PF00096.26	1.8e-15	3	4
FBpp0311369	zf-C2H2	PF00096.26	1.8e-15	4	4
FBpp0289808	zf-C2H2_jaz	PF12171.8	1.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0300581	-	991	-	FBpp0289808	294 (aa)	-	E1JII8
FBtr0300580	-	1251	-	FBpp0289807	256 (aa)	-	Q9VGL1
FBtr0345158	-	1181	-	FBpp0311369	256 (aa)	-	Q9VGL1

Gene Model

Click here to download FBgn0037923's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0037923's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0037923	CG6813	82	38.095	FBgn0038549	CG17802	57	36.054
FBgn0037923	CG6813	77	36.134	FBgn0020309	crol	53	36.134
FBgn0037923	CG6813	100	35.156	FBgn0051388	CG31388	97	34.356
FBgn0037923	CG6813	98	31.560	FBgn0037618	ouib	96	32.248
FBgn0037923	CG6813	92	36.364	FBgn0028895	CG17328	59	36.364
FBgn0037923	CG6813	55	31.973	FBgn0052772	CG32772	55	31.973

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000976	transcription regulatory region sequence-specific DNA binding	-	ISS	Function
GO:0003700	DNA-binding transcription factor activity	-	ISS	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISS	Component
GO:0006355	regulation of transcription, DNA-templated	-	ISS	Process
GO:0008270	zinc ion binding	-	IEA	Function