EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0038046 (Gene tree)
Gene ID: 41529
Gene Symbol: CG5641
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Minus strand
Length: 1488 bases
Position: chr3R:12427795-12429282
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0082066	DZF	PF07528.14	2e-121	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0082594	-	1365	-	FBpp0082066	396 (aa)	-	Q9VG73

Gene Model

Click here to download FBgn0038046's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0038046's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0038046	CG5641	86	58.065	ENSG00000143621	ILF2	99	57.103	Homo_sapiens
FBgn0038046	CG5641	82	59.939	ENSAPOG00000009781	ilf2	99	57.939	Acanthochromis_polyacanthus
FBgn0038046	CG5641	86	58.187	ENSAMEG00000012155	ILF2	99	56.313	Ailuropoda_melanoleuca
FBgn0038046	CG5641	82	59.939	ENSACIG00000013471	ilf2	97	58.873	Amphilophus_citrinellus
FBgn0038046	CG5641	88	58.974	ENSAOCG00000018379	ilf2	99	56.818	Amphiprion_ocellaris
FBgn0038046	CG5641	88	58.974	ENSAPEG00000017042	ilf2	99	56.818	Amphiprion_percula
FBgn0038046	CG5641	88	58.974	ENSATEG00000013505	ilf2	96	57.653	Anabas_testudineus
FBgn0038046	CG5641	89	57.983	ENSAPLG00000016146	ILF2	97	57.983	Anas_platyrhynchos
FBgn0038046	CG5641	86	58.065	ENSANAG00000007295	-	99	56.313	Aotus_nancymaae
FBgn0038046	CG5641	89	48.732	ENSANAG00000038483	-	99	47.475	Aotus_nancymaae
FBgn0038046	CG5641	88	58.974	ENSACLG00000017159	ilf2	93	57.653	Astatotilapia_calliptera
FBgn0038046	CG5641	88	58.974	ENSAMXG00000010896	ilf2	98	57.071	Astyanax_mexicanus
FBgn0038046	CG5641	91	69.806	ENSBTAG00000048543	-	94	69.291	Bos_taurus
FBgn0038046	CG5641	86	58.065	ENSBTAG00000012471	ILF2	99	57.103	Bos_taurus
FBgn0038046	CG5641	80	32.716	WBGene00011253	R11H6.5	81	32.716	Caenorhabditis_elegans
FBgn0038046	CG5641	86	58.065	ENSCJAG00000010264	ILF2	99	56.313	Callithrix_jacchus
FBgn0038046	CG5641	86	58.065	ENSCAFG00000017530	ILF2	99	56.313	Canis_familiaris
FBgn0038046	CG5641	91	56.284	ENSCAFG00020010294	ILF2	100	55.276	Canis_lupus_dingo
FBgn0038046	CG5641	86	58.065	ENSCHIG00000012048	ILF2	99	57.103	Capra_hircus
FBgn0038046	CG5641	86	58.065	ENSTSYG00000012061	ILF2	99	56.313	Carlito_syrichta
FBgn0038046	CG5641	86	44.152	ENSTSYG00000028407	-	99	45.063	Carlito_syrichta
FBgn0038046	CG5641	86	58.065	ENSCPOG00000005835	ILF2	99	56.313	Cavia_porcellus
FBgn0038046	CG5641	86	58.065	ENSCCAG00000021436	ILF2	99	56.313	Cebus_capucinus
FBgn0038046	CG5641	86	58.065	ENSCATG00000045233	ILF2	99	56.313	Cercocebus_atys
FBgn0038046	CG5641	86	58.065	ENSCLAG00000003140	ILF2	99	56.313	Chinchilla_lanigera
FBgn0038046	CG5641	85	47.198	ENSCSAG00000011762	-	92	46.341	Chlorocebus_sabaeus
FBgn0038046	CG5641	86	58.187	ENSCSAG00000001866	-	99	56.313	Chlorocebus_sabaeus
FBgn0038046	CG5641	86	57.185	ENSCSAG00000019000	-	99	55.556	Chlorocebus_sabaeus
FBgn0038046	CG5641	70	54.854	ENSCHOG00000003310	ILF2	78	53.191	Choloepus_hoffmanni
FBgn0038046	CG5641	89	58.239	ENSCPBG00000025410	ILF2	99	58.217	Chrysemys_picta_bellii
FBgn0038046	CG5641	91	55.402	ENSCING00000003447	nf45	99	54.521	Ciona_intestinalis
FBgn0038046	CG5641	90	51.685	ENSCSAVG00000007064	-	97	49.742	Ciona_savignyi
FBgn0038046	CG5641	86	58.065	ENSCANG00000012992	ILF2	99	56.313	Colobus_angolensis_palliatus
FBgn0038046	CG5641	80	53.774	ENSCGRG00001012241	-	96	50.258	Cricetulus_griseus_chok1gshd
FBgn0038046	CG5641	86	58.065	ENSCGRG00001009622	-	99	56.313	Cricetulus_griseus_chok1gshd
FBgn0038046	CG5641	86	58.065	ENSCGRG00000007660	-	99	56.313	Cricetulus_griseus_crigri
FBgn0038046	CG5641	80	53.774	ENSCGRG00000007545	-	96	50.258	Cricetulus_griseus_crigri
FBgn0038046	CG5641	88	58.120	ENSCSEG00000018437	ilf2	99	56.566	Cynoglossus_semilaevis
FBgn0038046	CG5641	74	59.184	ENSCVAG00000018474	ilf2	99	59.184	Cyprinodon_variegatus
FBgn0038046	CG5641	88	58.405	ENSDARG00000014591	ilf2	97	56.848	Danio_rerio
FBgn0038046	CG5641	83	46.341	ENSDNOG00000033116	-	97	43.734	Dasypus_novemcinctus
FBgn0038046	CG5641	86	56.560	ENSDNOG00000015220	-	99	54.660	Dasypus_novemcinctus
FBgn0038046	CG5641	90	47.368	ENSDORG00000025413	-	95	47.368	Dipodomys_ordii
FBgn0038046	CG5641	86	58.065	ENSDORG00000007966	Ilf2	99	56.313	Dipodomys_ordii
FBgn0038046	CG5641	77	51.634	ENSEBUG00000011722	ilf2	85	51.634	Eptatretus_burgeri
FBgn0038046	CG5641	86	58.065	ENSEASG00005000879	ILF2	99	56.313	Equus_asinus_asinus
FBgn0038046	CG5641	86	58.065	ENSECAG00000008567	ILF2	99	56.313	Equus_caballus
FBgn0038046	CG5641	70	57.328	ENSEEUG00000013100	ILF2	83	55.682	Erinaceus_europaeus
FBgn0038046	CG5641	88	58.689	ENSELUG00000015989	ILF2	97	58.873	Esox_lucius
FBgn0038046	CG5641	96	53.646	ENSELUG00000008674	-	98	53.671	Esox_lucius
FBgn0038046	CG5641	86	58.065	ENSFCAG00000008171	ILF2	99	56.313	Felis_catus
FBgn0038046	CG5641	81	60.125	ENSFALG00000012046	ILF2	96	60.125	Ficedula_albicollis
FBgn0038046	CG5641	86	56.012	ENSFDAG00000006422	-	97	54.293	Fukomys_damarensis
FBgn0038046	CG5641	89	56.941	ENSFDAG00000009216	ILF2	97	55.844	Fukomys_damarensis
FBgn0038046	CG5641	89	59.040	ENSGMOG00000013725	ilf2	97	56.743	Gadus_morhua
FBgn0038046	CG5641	83	59.517	ENSGALG00000011570	ILF2	99	53.571	Gallus_gallus
FBgn0038046	CG5641	88	58.689	ENSGACG00000000543	ilf2	97	57.398	Gasterosteus_aculeatus
FBgn0038046	CG5641	89	58.239	ENSGAGG00000012431	ILF2	99	57.071	Gopherus_agassizii
FBgn0038046	CG5641	86	58.065	ENSGGOG00000001814	ILF2	99	56.313	Gorilla_gorilla
FBgn0038046	CG5641	88	58.974	ENSHBUG00000007495	ilf2	96	57.653	Haplochromis_burtoni
FBgn0038046	CG5641	86	58.065	ENSHGLG00000004134	ILF2	100	56.030	Heterocephalus_glaber_female
FBgn0038046	CG5641	89	56.825	ENSHGLG00100011410	-	99	55.330	Heterocephalus_glaber_male
FBgn0038046	CG5641	87	46.686	ENSHGLG00100017501	-	80	46.053	Heterocephalus_glaber_male
FBgn0038046	CG5641	88	58.120	ENSHCOG00000007106	ilf2	96	56.633	Hippocampus_comes
FBgn0038046	CG5641	91	58.726	ENSIPUG00000021905	ilf2	97	57.364	Ictalurus_punctatus
FBgn0038046	CG5641	86	58.358	ENSSTOG00000021457	-	98	56.203	Ictidomys_tridecemlineatus
FBgn0038046	CG5641	90	45.225	ENSSTOG00000020511	-	91	44.974	Ictidomys_tridecemlineatus
FBgn0038046	CG5641	86	58.065	ENSSTOG00000000667	ILF2	99	56.313	Ictidomys_tridecemlineatus
FBgn0038046	CG5641	86	46.903	ENSJJAG00000013500	-	99	46.835	Jaculus_jaculus
FBgn0038046	CG5641	86	58.065	ENSJJAG00000023269	-	99	56.313	Jaculus_jaculus
FBgn0038046	CG5641	90	58.380	ENSKMAG00000000823	ilf2	96	57.143	Kryptolebias_marmoratus
FBgn0038046	CG5641	88	58.974	ENSLBEG00000024204	ilf2	96	57.653	Labrus_bergylta
FBgn0038046	CG5641	82	58.716	ENSLACG00000007384	ILF2	97	57.303	Latimeria_chalumnae
FBgn0038046	CG5641	86	58.187	ENSLAFG00000028218	ILF2	99	56.313	Loxodonta_africana
FBgn0038046	CG5641	82	58.410	ENSMFAG00000037304	-	99	57.103	Macaca_fascicularis
FBgn0038046	CG5641	50	59.799	ENSMFAG00000030239	-	99	57.576	Macaca_fascicularis
FBgn0038046	CG5641	86	54.545	ENSMMUG00000008149	ILF2	99	57.103	Macaca_mulatta
FBgn0038046	CG5641	89	47.443	ENSMMUG00000031442	-	99	46.750	Macaca_mulatta
FBgn0038046	CG5641	86	55.263	ENSMNEG00000011128	-	99	53.788	Macaca_nemestrina
FBgn0038046	CG5641	59	57.511	ENSMLEG00000037913	ILF2	99	58.442	Mandrillus_leucophaeus
FBgn0038046	CG5641	88	58.689	ENSMAMG00000020442	ilf2	97	58.873	Mastacembelus_armatus
FBgn0038046	CG5641	88	58.974	ENSMZEG00005017498	ilf2	96	57.653	Maylandia_zebra
FBgn0038046	CG5641	52	57.561	ENSMGAG00000005653	-	99	57.561	Meleagris_gallopavo
FBgn0038046	CG5641	86	58.065	ENSMAUG00000013875	Ilf2	99	56.313	Mesocricetus_auratus
FBgn0038046	CG5641	86	44.898	ENSMICG00000035317	-	98	50.711	Microcebus_murinus
FBgn0038046	CG5641	50	60.804	ENSMICG00000013730	-	99	58.442	Microcebus_murinus
FBgn0038046	CG5641	86	58.065	ENSMOCG00000016112	Ilf2	99	56.313	Microtus_ochrogaster
FBgn0038046	CG5641	82	54.740	ENSMMOG00000012134	ilf2	96	54.366	Mola_mola
FBgn0038046	CG5641	86	58.358	ENSMODG00000017376	ILF2	99	56.566	Monodelphis_domestica
FBgn0038046	CG5641	87	57.267	ENSMALG00000019750	ilf2	91	56.452	Monopterus_albus
FBgn0038046	CG5641	86	58.065	MGP_CAROLIEiJ_G0025237	Ilf2	99	56.313	Mus_caroli
FBgn0038046	CG5641	86	58.065	ENSMUSG00000001016	Ilf2	99	56.313	Mus_musculus
FBgn0038046	CG5641	86	58.065	MGP_PahariEiJ_G0026681	Ilf2	99	56.313	Mus_pahari
FBgn0038046	CG5641	86	58.065	MGP_SPRETEiJ_G0026180	Ilf2	99	56.313	Mus_spretus
FBgn0038046	CG5641	86	58.065	ENSMPUG00000008267	ILF2	95	56.812	Mustela_putorius_furo
FBgn0038046	CG5641	86	58.480	ENSMLUG00000001847	-	99	56.566	Myotis_lucifugus
FBgn0038046	CG5641	87	58.721	ENSMLUG00000030378	-	96	56.410	Myotis_lucifugus
FBgn0038046	CG5641	86	58.358	ENSNGAG00000012145	Ilf2	99	56.566	Nannospalax_galili
FBgn0038046	CG5641	87	58.309	ENSNBRG00000017801	ilf2	97	56.853	Neolamprologus_brichardi
FBgn0038046	CG5641	86	58.065	ENSNLEG00000010440	ILF2	98	56.041	Nomascus_leucogenys
FBgn0038046	CG5641	86	58.358	ENSMEUG00000003651	ILF2	99	56.566	Notamacropus_eugenii
FBgn0038046	CG5641	58	57.759	ENSOPRG00000003728	ILF2	100	56.061	Ochotona_princeps
FBgn0038046	CG5641	80	47.319	ENSODEG00000006935	-	87	45.479	Octodon_degus
FBgn0038046	CG5641	86	57.771	ENSODEG00000018629	-	99	56.061	Octodon_degus
FBgn0038046	CG5641	88	58.974	ENSONIG00000010350	ilf2	96	57.653	Oreochromis_niloticus
FBgn0038046	CG5641	86	58.065	ENSOCUG00000005430	ILF2	95	56.313	Oryctolagus_cuniculus
FBgn0038046	CG5641	88	57.835	ENSORLG00000010955	ilf2	99	57.660	Oryzias_latipes
FBgn0038046	CG5641	88	57.835	ENSORLG00020018874	ilf2	98	56.313	Oryzias_latipes_hni
FBgn0038046	CG5641	88	57.835	ENSORLG00015010674	ilf2	83	56.313	Oryzias_latipes_hsok
FBgn0038046	CG5641	88	58.120	ENSOMEG00000008691	ilf2	98	56.566	Oryzias_melastigma
FBgn0038046	CG5641	86	58.065	ENSOARG00000000787	ILF2	99	56.313	Ovis_aries
FBgn0038046	CG5641	86	58.065	ENSPPAG00000002027	ILF2	99	56.313	Pan_paniscus
FBgn0038046	CG5641	86	58.065	ENSPPRG00000023707	ILF2	99	56.313	Panthera_pardus
FBgn0038046	CG5641	86	58.065	ENSPTIG00000017810	ILF2	99	56.313	Panthera_tigris_altaica
FBgn0038046	CG5641	82	58.410	ENSPTRG00000001358	ILF2	99	57.103	Pan_troglodytes
FBgn0038046	CG5641	86	58.065	ENSPTRG00000050123	-	99	56.313	Pan_troglodytes
FBgn0038046	CG5641	86	58.065	ENSPANG00000008736	ILF2	99	56.313	Papio_anubis
FBgn0038046	CG5641	91	59.280	ENSPKIG00000014302	ilf2	97	58.140	Paramormyrops_kingsleyae
FBgn0038046	CG5641	90	57.939	ENSPSIG00000004657	ILF2	99	56.313	Pelodiscus_sinensis
FBgn0038046	CG5641	50	62.814	ENSPMGG00000008441	ilf2	99	59.740	Periophthalmus_magnuspinnatus
FBgn0038046	CG5641	86	58.065	ENSPEMG00000017802	Ilf2	99	56.313	Peromyscus_maniculatus_bairdii
FBgn0038046	CG5641	86	58.358	ENSPCIG00000029363	ILF2	99	56.566	Phascolarctos_cinereus
FBgn0038046	CG5641	88	58.405	ENSPFOG00000000095	ilf2	96	57.143	Poecilia_formosa
FBgn0038046	CG5641	88	58.405	ENSPLAG00000000522	ilf2	96	57.143	Poecilia_latipinna
FBgn0038046	CG5641	79	60.450	ENSPMEG00000022858	ilf2	88	57.267	Poecilia_mexicana
FBgn0038046	CG5641	82	59.633	ENSPREG00000020243	ilf2	97	58.592	Poecilia_reticulata
FBgn0038046	CG5641	86	58.065	ENSPPYG00000000800	DKFZP469C1132	99	56.313	Pongo_abelii
FBgn0038046	CG5641	86	58.065	ENSPCOG00000028569	ILF2	99	56.313	Propithecus_coquereli
FBgn0038046	CG5641	86	58.065	ENSPVAG00000011077	ILF2	98	56.313	Pteropus_vampyrus
FBgn0038046	CG5641	82	53.211	ENSPNYG00000019624	ilf2	96	52.113	Pundamilia_nyererei
FBgn0038046	CG5641	88	59.544	ENSPNAG00000009365	ilf2	98	57.576	Pygocentrus_nattereri
FBgn0038046	CG5641	86	58.065	ENSRNOG00000014154	Ilf2	99	56.313	Rattus_norvegicus
FBgn0038046	CG5641	86	58.065	ENSRBIG00000042614	ILF2	99	56.313	Rhinopithecus_bieti
FBgn0038046	CG5641	86	52.786	ENSRROG00000031990	ILF2	99	51.768	Rhinopithecus_roxellana
FBgn0038046	CG5641	84	50.150	ENSSBOG00000023173	-	99	48.485	Saimiri_boliviensis_boliviensis
FBgn0038046	CG5641	86	58.065	ENSSBOG00000033031	ILF2	99	56.313	Saimiri_boliviensis_boliviensis
FBgn0038046	CG5641	86	58.358	ENSSHAG00000010138	ILF2	99	56.566	Sarcophilus_harrisii
FBgn0038046	CG5641	91	58.726	ENSSFOG00015010137	ilf2	97	57.623	Scleropages_formosus
FBgn0038046	CG5641	88	58.689	ENSSMAG00000020810	ilf2	98	56.818	Scophthalmus_maximus
FBgn0038046	CG5641	88	58.974	ENSSDUG00000009850	ilf2	96	57.653	Seriola_dumerili
FBgn0038046	CG5641	82	60.245	ENSSLDG00000012486	ilf2	97	59.155	Seriola_lalandi_dorsalis
FBgn0038046	CG5641	58	49.138	ENSSARG00000011984	-	65	49.035	Sorex_araneus
FBgn0038046	CG5641	50	61.809	ENSSPUG00000003834	ILF2	95	59.740	Sphenodon_punctatus
FBgn0038046	CG5641	88	58.689	ENSSPAG00000003967	ilf2	96	57.398	Stegastes_partitus
FBgn0038046	CG5641	86	58.065	ENSSSCG00000028553	ILF2	99	56.313	Sus_scrofa
FBgn0038046	CG5641	88	58.689	ENSTRUG00000004888	ilf2	98	56.818	Takifugu_rubripes
FBgn0038046	CG5641	87	47.093	ENSTBEG00000014891	ILF2	99	46.809	Tupaia_belangeri
FBgn0038046	CG5641	86	58.065	ENSTTRG00000014759	ILF2	98	56.313	Tursiops_truncatus
FBgn0038046	CG5641	50	60.804	ENSUAMG00000003639	ILF2	99	58.442	Ursus_americanus
FBgn0038046	CG5641	82	58.716	ENSUMAG00000020682	ILF2	99	57.382	Ursus_maritimus
FBgn0038046	CG5641	86	58.065	ENSVPAG00000010262	ILF2	99	56.313	Vicugna_pacos
FBgn0038046	CG5641	86	58.065	ENSVVUG00000028258	ILF2	99	56.313	Vulpes_vulpes
FBgn0038046	CG5641	93	51.220	ENSXETG00000014290	ilf2	97	50.643	Xenopus_tropicalis
FBgn0038046	CG5641	83	59.215	ENSXCOG00000002350	ilf2	96	55.612	Xiphophorus_couchianus
FBgn0038046	CG5641	88	58.405	ENSXMAG00000003285	ilf2	96	57.143	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	18981222.	IC	Process
GO:0003677	DNA binding	-	ISS	Function
GO:0003725	double-stranded RNA binding	-	ISS	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	-	ISS	Component
GO:0005730	nucleolus	-	ISS	Component
GO:0006351	transcription, DNA-templated	-	ISS	Process
GO:0006955	immune response	-	IEA	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0045893	positive regulation of transcription, DNA-templated	-	ISS	Process
GO:0071011	precatalytic spliceosome	18981222.	HDA	Component
GO:0071013	catalytic step 2 spliceosome	18981222.	HDA	Component